NPY genes play an essential role in root gravitropic responses in Arabidopsis

Molecular Plant

Volumn 4, Issue 1, 2011, Pages 171-179

  Li, Yuanting ^a,b   Dai, Xinhua ^a   Cheng, Youfa ^a,c   Zhao, Yunde ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b LANZHOU UNIVERSITY   (China)

^c INSTITUTE OF BOTANY   (China)

Author keywords

Auxin; Development; Light signaling; Root biology; Signal transduction

Indexed keywords

ARABIDOPSIS;

EID: 79551557636     PISSN: 16742052     EISSN: 17529867     Source Type: Journal    
DOI: 10.1093/mp/ssq052     Document Type: Article

References (50)

1. Alonso, J.M., et al. (2003). Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science. 301, 653-657.
2. Benjamins, R., Quint, A., Weijers, D., Hooykaas, P., and Offringa, R. (2001). The PINOID protein kinase regulates organ development in Arabidopsis by enhancing polar auxin transport. Development. 128, 4057-4067.
3. Bennett, M.J., et al. (1996). Arabidopsis AUX1 gene: a permease-like regulator of root gravitropism. Science. 273, 948-950.
4. Chen, R., Hilson, P., Sedbrook, J., Rosen, E., Caspar, T., and Masson, P.H. (1998). The Arabidopsis thaliana AGRAVITROPIC 1 gene encodes a component of the polar-auxin-transport efflux carrier. Proc. Natl Acad. Sci. U S A. 95, 15112-15117.
5. Cheng, Y., Dai, X., and Zhao, Y. (2006). Auxin biosynthesis by the YUCCA flavin monooxygenases controls the formation of floral organs and vascular tissues in Arabidopsis. Genes Dev. 20, 1790-1799.
6. Cheng, Y., Qin, G., Dai, X., and Zhao, Y. (2007). NPY1, a BTBNPH3- like protein, plays a critical role in auxin-regulated organogenesis in Arabidopsis. Proc. Natl Acad. Sci. U S A. 104, 18825-18829.
7. Cheng, Y., Qin, G., Dai, X., and Zhao, Y. (2008). NPY genes and AGC kinases define two key steps in auxin-mediated organogenesis in Arabidopsis. Proc. Natl Acad. Sci. U S A. 105, 21017-21022.
8. Christensen, S.K., Dagenais, N., Chory, J., and Weigel, D. (2000). Regulation of auxin response by the protein kinase PINOID. Cell. 100, 469-478.
9. Christie, J.M., et al. (1998). Arabidopsis NPH1: a flavoprotein with the properties of a photoreceptor for phototropism. Science. 282, 1698-1701.
10. Clough, S.J., and Bent, A.F. (1998). Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16, 735-743.
11. Friml, J., Wisniewska, J., Benkova, E., Mendgen, K., and Palme, K. (2002). Lateral relocation of auxin efflux regulator PIN3 mediates tropism in Arabidopsis. Nature. 415, 806-809.
12. Furutani, M., et al. (2007). The gene MACCHI-BOU 4/ENHANCER OF PINOID encodes a NPH3-like protein and reveals similarities between organogenesis and phototropism at the molecular level. Development. 134, 3849-3859.
13. Galvan-Ampudia, C.S., and Offringa, R. (2007). Plant evolution: AGC kinases tell the auxin tale. Trends Plant Sci. 12, 541-547.
14. Galweiler, L., et al. (1998). Regulation of polar auxin transport by AtPIN1 in Arabidopsis vascular tissue. Science. 282, 2226-2230.
15. Hardtke, C.S., and Berleth, T. (1998). The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development. EMBO J. 17, 1405-1411.
16. Harper, R.M., et al. (2000). The NPH4 locus encodes the auxin response factor ARF7, a conditional regulator of differential growth in aerial Arabidopsis tissue. Plant Cell. 12, 757-770.
17. Holland, J.J., Roberts, D., and Liscum, E. (2009). Understanding phototropism: from Darwin to today. J. Exp. Bot. 60, 1969-1978.
18. Huala, E., Oeller, P.W., Liscum, E., Han, I.S., Larsen, E., and Briggs, W.R. (1997). Arabidopsis NPH1: a protein kinase with a putative redox-sensing domain. Science. 278, 2120-2123.
19. Inada, S., Ohgishi, M., Mayama, T., Okada, K., and Sakai, T. (2004). RPT2 is a signal transducer involved in phototropic response and stomatal opening by association with phototropin 1 in Arabidopsis thaliana. Plant Cell. 16, 887-896.
20. Jefferson, R.A., Kavanagh, T.A., and Bevan, M.W. (1987). GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6, 3901-3907.
21. Lalanne, E., et al. (2004). Analysis of transposon insertion mutants highlights the diversity of mechanisms underlying male progamic development in Arabidopsis. Genetics. 167, 1975-1986.
22. Li, J., Dai, X., and Zhao, Y. (2006). A role for auxin response factor 19 in auxin and ethylene signaling in Arabidopsis. Plant Physiol. 140, 899-908.
23. Liscum, E., and Briggs, W.R. (1995). Mutations in the NPH1 locus of Arabidopsis disrupt the perception of phototropic stimuli. Plant Cell. 7, 473-485.
24. Luschnig, C., Gaxiola, R.A., Grisafi, P., and Fink, G.R. (1998). EIR1, a root-specific protein involved in auxin transport, is required for gravitropism in Arabidopsis thaliana. Genes Dev. 12, 2175-2187.
25. Marchant, A., et al. (1999). AUX1 regulates root gravitropism in Arabidopsis by facilitating auxin uptake within root apical tissues. EMBO J. 18, 2066-2073.
26. Michniewicz, M., et al. (2007). Antagonistic regulation of PIN phosphorylation by PP2A and PINOID directs auxin flux. Cell. 130, 1044-1056.
27. Morita, M.T. (2010). Directional gravity sensing in gravitropism. Annu. Rev. Plant Biol. 61, 705-720.
28. Motchoulski, A., and Liscum, E. (1999). Arabidopsis NPH3: A NPH1 photoreceptor-interacting protein essential for phototropism. Science. 286, 961-964.
29. Muller, A., et al. (1998). AtPIN2 defines a locus of Arabidopsis for root gravitropism control. EMBO J. 17, 6903-6911.
30. Nagpal, P., et al. (2000). AXR2 encodes a member of the Aux/IAA protein family. Plant Physiol. 123, 563-574.
31. Okushima, Y., et al. (2005). Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19. Plant Cell. 17, 444-463.
32. Pedmale, U.V., and Liscum, E. (2007). Regulation of phototropic signaling in Arabidopsis via phosphorylation state changes in the phototropin 1-interacting protein NPH3. J. Biol. Chem. 282, 19992-20001.
33. Petricka, J.J., Clay, N.K., and Nelson, T.M. (2008). Vein patterning screens and the defectively organized tributaries mutants in Arabidopsis thaliana. Plant J. 56, 251-263.
34. Przemeck, G.K., Mattsson, J., Hardtke, C.S., Sung, Z.R., and Berleth, T. (1996). Studies on the role of the Arabidopsis gene MONOPTEROS in vascular development and plant cell axialization. Planta. 200, 229-237.
35. Sabatini, S., et al. (1999). An auxin-dependent distal organizer of pattern and polarity in the Arabidopsis root. Cell. 99, 463-472.
36. Sakai, T., et al. (2001). Arabidopsis nph1 and npl1: blue light receptors that mediate both phototropism and chloroplast relocation. Proc. Natl Acad. Sci. U S A. 98, 6969-6974.
37. Sakamoto, K., and Briggs, W.R. (2002). Cellular and subcellular localization of phototropin 1. Plant Cell. 14, 1723-1735.
38. Santner, A.A., and Watson, J.C. (2006). The WAG1 and WAG2 protein kinases negatively regulate root waving in Arabidopsis. Plant J. 45, 752-764.
39. Stone, B.B., et al. (2008). Disruptions in AUX1-dependent auxin influx alterhypocotylphototropisminArabidopsis.Mol.Plant. 1, 129-144.
40. Sukumar, P., Edwards, K.S., Rahman, A., Delong, A., and Muday, G.K. (2009). PINOID kinase regulates root gravitropism through modulation of PIN2-dependent basipetal auxin transport in Arabidopsis. Plant Physiol. 150, 722-735.
41. Tatematsu, K., et al. (2004). MASSUGU2 encodes Aux/IAA19, an auxin-regulated protein that functions together with the transcriptional activator NPH4/ARF7 to regulate differential growth responses of hypocotyl and formation of lateral roots in Arabidopsis thaliana. Plant Cell. 16, 379-393.
42. Tian, Q., and Reed, J.W. (1999). Control of auxin-regulated root development by the Arabidopsis thaliana SHY2/IAA3 gene. Development. 126, 711-721.
43. Treml, B.S., et al. (2005). The gene ENHANCER OF PINOID controls cotyledon development in the Arabidopsis embryo. Development. 132, 4063-4074.
44. Wan, Y.L., Eisinger, W., Ehrhardt, D., Kubitscheck, U., Baluska, F., and Briggs, W. (2008). The subcellular localization and bluelight- induced movement of phototropin 1-GFP in etiolated seedlings of Arabidopsis thaliana. Mol. Plant. 1, 103-117.
45. Wilmoth, J.C., et al. (2005). NPH4/ARF7 and ARF19 promote leaf expansion and auxin-induced lateral root formation. Plant J. 43, 118-130.
46. Yamada, M., Greenham, K., Prigge, M.J., Jensen, P.J., and Estelle, M. (2009). The TRANSPORT INHIBITOR RESPONSE2 gene is required for auxin synthesis and diverse aspects of plant development. Plant Physiol. 151, 168-179.
47. Yang, X., et al. (2004). The IAA1 protein is encoded by AXR5 and is a substrate of SCF(TIR1). Plant J. 40, 772-782.
48. Zhang, Y., He, J., and McCormick, S. (2009). Two Arabidopsis AGC kinases are critical for the polarized growth of pollen tubes. Plant J. 58, 474-484.
49. Zhao, Y., et al. (2001). A role for flavin monooxygenase-like enzymes in auxin biosynthesis. Science. 291, 306-309.
50. Zourelidou, M., et al. (2009). The polarly localized D6 PROTEIN KINASE is required for efficient auxin transport in Arabidopsis thaliana. Development. 136, 627-636.