-
1
-
-
0037088642
-
Both DNA and histone fold sequences contribute to archaeal nucleosome stability
-
Bailey KA, Marc F, Sandman K, Reeve JN (2002) Both DNA and histone fold sequences contribute to archaeal nucleosome stability. J Biol Chem 277:9293-9301
-
(2002)
J Biol Chem
, vol.277
, pp. 9293-9301
-
-
Bailey, K.A.1
Marc, F.2
Sandman, K.3
Reeve, J.N.4
-
2
-
-
0037023326
-
The interaction of Alba, a conserved archaeal, chromatin protein, with Sir2 and its regulation by acetylation
-
Bell SD, Botting CH, Wardleworth BN, Jackson SP, White MF (2002) The interaction of Alba, a conserved archaeal, chromatin protein, with Sir2 and its regulation by acetylation. Science 296:148-151
-
(2002)
Science
, vol.296
, pp. 148-151
-
-
Bell, S.D.1
Botting, C.H.2
Wardleworth, B.N.3
Jackson, S.P.4
White, M.F.5
-
3
-
-
39149118031
-
Mesophilic crenarchaeota: Proposal for a third archaeal phylum, the Thaumarchaeota
-
Brochier-Armanet C, Boussau B, Gribaldo S, Forterre P (2008) Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota. Nat Rev Microbiol 6:245-252
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 245-252
-
-
Brochier-Armanet, C.1
Boussau, B.2
Gribaldo, S.3
Forterre, P.4
-
4
-
-
0034127111
-
Growth phase-dependent expression and degradation of histones in the thermophilic archaeon Thermococcus zilligii
-
Dinger ME, Baillie GJ, Musgrave DR (2000) Growth phase-dependent expression and degradation of histones in the thermophilic archaeon Thermococcus zilligii. Mol Microbiol 36:876-885
-
(2000)
Mol Microbiol
, vol.36
, pp. 876-885
-
-
Dinger, M.E.1
Baillie, G.J.2
Musgrave, D.R.3
-
6
-
-
5444260403
-
Characterization of Sac10a, a hyperthermophile DNA-binding protein from Sulfolobus acidocaldarius
-
Edmondson SP, Kahsai MA, Gupta R, Shriver JW (2004) Characterization of Sac10a, a hyperthermophile DNA-binding protein from Sulfolobus acidocaldarius. Biochemistry 43:13026-13036
-
(2004)
Biochemistry
, vol.43
, pp. 13026-13036
-
-
Edmondson, S.P.1
Kahsai, M.A.2
Gupta, R.3
Shriver, J.W.4
-
7
-
-
45849112155
-
A korarchaeal genome reveals insights into the evolution of the Archaea
-
Elkins JG, Podar M, Graham DE, Makarova KS, Wolf Y, Randau L, Hedlund BP, Brochier-Armanet C, Kunin V, Anderson I, Lapidus A, Goltsman E, Barry K, Koonin EV, Hugenholtz P, Kyrpides N, Wanner G, Richardson P, Keller M, Stetter KO (2008) A korarchaeal genome reveals insights into the evolution of the Archaea. Proc Natl Acad Sci USA 105:8102-8107
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 8102-8107
-
-
Elkins, J.G.1
Podar, M.2
Graham, D.E.3
Makarova, K.S.4
Wolf, Y.5
Randau, L.6
Hedlund, B.P.7
Brochier-Armanet, C.8
Kunin, V.9
Anderson, I.10
Lapidus, A.11
Goltsman, E.12
Barry, K.13
Koonin, E.V.14
Hugenholtz, P.15
Kyrpides, N.16
Wanner, G.17
Richardson, P.18
Keller, M.19
Stetter, K.O.20
more..
-
8
-
-
0034802612
-
An ancestral nuclear protein assembly: Crystal structure of the Methanopyrus kandleri histone
-
Fahrner RL, Cascio D, Lake JA, Slesarev A (2001) An ancestral nuclear protein assembly: crystal structure of the Methanopyrus kandleri histone. Protein Sci 10:2002-2007
-
(2001)
Protein Sci
, vol.10
, pp. 2002-2007
-
-
Fahrner, R.L.1
Cascio, D.2
Lake, J.A.3
Slesarev, A.4
-
9
-
-
0031718377
-
The crystal structure of the hyperthermophile chromosomal protein Sso7d bound to DNA
-
Gao YG, Su SY, Robinson H, Padmanabhan S, Lim L, McCrary BS, Edmondson SP, Shriver JW, Wang A H J (1998) The crystal structure of the hyperthermophile chromosomal protein Sso7d bound to DNA. Nat Struct Biol 5:782-786
-
(1998)
Nat Struct Biol
, vol.5
, pp. 782-786
-
-
Gao, Y.G.1
Su, S.Y.2
Robinson, H.3
Padmanabhan, S.4
Lim, L.5
McCrary, B.S.6
Edmondson, S.P.7
Shriver, J.W.8
Wang, A.H.J.9
-
10
-
-
0346256792
-
Ssh10b, a conserved thermophilic archaeal protein, binds RNA in vivo
-
Guo R, Xue H, Huang L (2003) Ssh10b, a conserved thermophilic archaeal protein, binds RNA in vivo. Mol Microbiol 50:1605-1615
-
(2003)
Mol Microbiol
, vol.50
, pp. 1605-1615
-
-
Guo, R.1
Xue, H.2
Huang, L.3
-
11
-
-
40249110035
-
Biochemical and structural characterization of Cren7, a novel chromatin protein conserved among Crenarchaea
-
Guo L, Feng YG, Zhang ZF, Yao HW, Luo YM, Wang JF, Huang L (2008) Biochemical and structural characterization of Cren7, a novel chromatin protein conserved among Crenarchaea. Nucleic Acids Res 36:1129-1137
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 1129-1137
-
-
Guo, L.1
Feng, Y.G.2
Zhang, Z.F.3
Yao, H.W.4
Luo, Y.M.5
Wang, J.F.6
Huang, L.7
-
12
-
-
40349091286
-
Biochemical characterization of DNA-binding proteins from Pyrobaculum aerophilum and Aeropyrum pernix
-
Hardy CD, Martin PK (2008) Biochemical characterization of DNA-binding proteins from Pyrobaculum aerophilum and Aeropyrum pernix. Extremophiles 12:235-246
-
(2008)
Extremophiles
, vol.12
, pp. 235-246
-
-
Hardy, C.D.1
Martin, P.K.2
-
13
-
-
4544227863
-
Mutational analysis of genes encoding chromatin proteins in the archaeon Methanococcus voltae indicates their involvement in the regulation of gene expression
-
Heinicke I, Muller J, Pittelkow M, Klein A (2004) Mutational analysis of genes encoding chromatin proteins in the archaeon Methanococcus voltae indicates their involvement in the regulation of gene expression. Mol Genet Genom 272:76-87
-
(2004)
Mol Genet Genom
, vol.272
, pp. 76-87
-
-
Heinicke, I.1
Muller, J.2
Pittelkow, M.3
Klein, A.4
-
14
-
-
0037086355
-
Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail
-
Jacobs SA, Khorasanizadeh S (2002) Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail. Science 295:2080-2083
-
(2002)
Science
, vol.295
, pp. 2080-2083
-
-
Jacobs, S.A.1
Khorasanizadeh, S.2
-
15
-
-
21744442923
-
Obligate heterodimerization of the archaeal Alba2 protein with Alba1 provides a mechanism for control of DNA packaging
-
Jelinska C, Conroy MJ, Craven CJ, Hounslow AM, Bullough PA, Waltho JP, Taylor GL, White MF (2005) Obligate heterodimerization of the archaeal Alba2 protein with Alba1 provides a mechanism for control of DNA packaging. Structure 13:963-971
-
(2005)
Structure
, vol.13
, pp. 963-971
-
-
Jelinska, C.1
Conroy, M.J.2
Craven, C.J.3
Hounslow, A.M.4
Bullough, P.A.5
Waltho, J.P.6
Taylor, G.L.7
White, M.F.8
-
16
-
-
14344265435
-
Solution structure, stability, and flexibility of Sso10a: A hyperthermophile coiled-coil DNA-binding protein
-
Kahsai MA, Vogler B, Clark AT, Edmondson SP, Shriver JW (2005) Solution structure, stability, and flexibility of Sso10a: A hyperthermophile coiled-coil DNA-binding protein. Biochemistry 44:2822-2832
-
(2005)
Biochemistry
, vol.44
, pp. 2822-2832
-
-
Kahsai, M.A.1
Vogler, B.2
Clark, A.T.3
Edmondson, S.P.4
Shriver, J.W.5
-
17
-
-
0033543174
-
The solution structure of the Sac7d/DNA complex: A small-angle X-ray scattering study
-
Krueger JK, McCrary BS, Wang A H J, Shriver JW, Trewhella J, Edmondson SP (1999) The solution structure of the Sac7d/DNA complex: a small-angle X-ray scattering study. Biochemistry 38:10247-10255
-
(1999)
Biochemistry
, vol.38
, pp. 10247-10255
-
-
Krueger, J.K.1
McCrary, B.S.2
Wang, A.H.J.3
Shriver, J.W.4
Trewhella, J.5
Edmondson, S.P.6
-
18
-
-
0013550357
-
DNA bending induced by the archaebacterial histone-like protein MC1
-
Le Cam E, Culard F, Larquet E, Delain E, Cognet J A H (1999) DNA bending induced by the archaebacterial histone-like protein MC1. J Mol Biol 285:1011-1021
-
(1999)
J Mol Biol
, vol.285
, pp. 1011-1021
-
-
Le Cam, E.1
Culard, F.2
Larquet, E.3
Delain, E.4
Cognet, J.A.H.5
-
19
-
-
0034014418
-
MJ1647, an open reading frame in the genome of the hyperthermophile Methanococcus jannaschii, encodes a very thermostable archaeal histone with a C-terminal extension
-
Li WT, Sandman K, Pereira SL, Reeve JN (2000) MJ1647, an open reading frame in the genome of the hyperthermophile Methanococcus jannaschii, encodes a very thermostable archaeal histone with a C-terminal extension. Extremophiles 4:43-51
-
(2000)
Extremophiles
, vol.4
, pp. 43-51
-
-
Li, W.T.1
Sandman, K.2
Pereira, S.L.3
Reeve, J.N.4
-
20
-
-
33846190584
-
CC1, a novel crenarchaeal DNA binding protein
-
Luo X, Schwarz-Linek U, Botting CH, Hensel R, Siebers B, White MF (2007) CC1, a novel crenarchaeal DNA binding protein. J Bacteriol 189:403-409
-
(2007)
J Bacteriol
, vol.189
, pp. 403-409
-
-
Luo, X.1
Schwarz-Linek, U.2
Botting, C.H.3
Hensel, R.4
Siebers, B.5
White, M.F.6
-
21
-
-
0001270373
-
Electron-microscopic study of DNA complexes with proteins from the archaebacterium Sulfolobus acidocaldarius
-
Lurz R, Grote M, Dijk J, Reinhardt R, Dobrinski B (1986) Electron-microscopic study of DNA complexes with proteins from the archaebacterium Sulfolobus acidocaldarius. EMBO J 5:3715-3721
-
(1986)
EMBO J
, vol.5
, pp. 3715-3721
-
-
Lurz, R.1
Grote, M.2
Dijk, J.3
Reinhardt, R.4
Dobrinski, B.5
-
22
-
-
21244467540
-
An archaeal SET domain protein exhibits distinct lysine methyltransferase activity towards DNA-associated protein MCl-alpha
-
Manzur KL, Zhou MM (2005) An archaeal SET domain protein exhibits distinct lysine methyltransferase activity towards DNA-associated protein MCl-alpha. FEBS Lett 579:3859-3865
-
(2005)
FEBS Lett
, vol.579
, pp. 3859-3865
-
-
Manzur, K.L.1
Zhou, M.M.2
-
23
-
-
20444427964
-
Sir2 and the acetyltransferase, Pat, regulate the archaeal chromatin protein, Alba
-
Marsh VL, Peak-Chew S Y, Bell SD (2005) Sir2 and the acetyltransferase, Pat, regulate the archaeal chromatin protein, Alba. J Biol Chem 280:21122-21128
-
(2005)
J Biol Chem
, vol.280
, pp. 21122-21128
-
-
Marsh, V.L.1
Peak-Chew, S.Y.2
Bell, S.D.3
-
24
-
-
0029883976
-
Equilibrium DNA binding of Sac7d protein from the hyperthermophile Sulfolobus acidocaldarius: Fluorescence and circular dichroism studies
-
McAfee JG, Edmondson SP, Zegar I, Shriver JW (1996) Equilibrium DNA binding of Sac7d protein from the hyperthermophile Sulfolobus acidocaldarius: fluorescence and circular dichroism studies. Biochemistry 35:4034-4045
-
(1996)
Biochemistry
, vol.35
, pp. 4034-4045
-
-
McAfee, J.G.1
Edmondson, S.P.2
Zegar, I.3
Shriver, J.W.4
-
25
-
-
0037096967
-
DNA bending, compaction and negative supercoiling by the architectural protein Sso7d of Sulfolobus solfataricus
-
Napoli A, Zivanovic Y, Bocs C, Buhler C, Rossi M, Forterre P, Ciaramella M (2002) DNA bending, compaction and negative supercoiling by the architectural protein Sso7d of Sulfolobus solfataricus. Nucleic Acids Res 30:2656-2662
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 2656-2662
-
-
Napoli, A.1
Zivanovic, Y.2
Bocs, C.3
Buhler, C.4
Rossi, M.5
Forterre, P.6
Ciaramella, M.7
-
26
-
-
4043143584
-
Reverse gyrase recruitment to DNA after UV light irradiation in Sulfolobus solfataricus
-
Napoli A, Valenti A, Salerno V, Nadal M, Garnier F, Rossi M, Ciaramella M (2004) Reverse gyrase recruitment to DNA after UV light irradiation in Sulfolobus solfataricus. J Biol Chem 279:33192-33198
-
(2004)
J Biol Chem
, vol.279
, pp. 33192-33198
-
-
Napoli, A.1
Valenti, A.2
Salerno, V.3
Nadal, M.4
Garnier, F.5
Rossi, M.6
Ciaramella, M.7
-
27
-
-
0037034911
-
Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9
-
Nielsen PR, Nietlispach D, Mott HR, Callaghan J, Bannister A, Kouzarides T, Murzin AG, Murzina NV, Laue ED (2002) Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9. Nature 416:103-107
-
(2002)
Nature
, vol.416
, pp. 103-107
-
-
Nielsen, P.R.1
Nietlispach, D.2
Mott, H.R.3
Callaghan, J.4
Bannister, A.5
Kouzarides, T.6
Murzin, A.G.7
Murzina, N.V.8
Laue, E.D.9
-
28
-
-
9744245199
-
NMR solution structure of the archaebacterial chromosomal protein MC1 reveals a new protein fold
-
Paquet F, Culard F, Barbault F, Maurizot JC, Lancelot G (2004) NMR solution structure of the archaebacterial chromosomal protein MC1 reveals a new protein fold. Biochemistry 43:14971-14978
-
(2004)
Biochemistry
, vol.43
, pp. 14971-14978
-
-
Paquet, F.1
Culard, F.2
Barbault, F.3
Maurizot, J.C.4
Lancelot, G.5
-
29
-
-
2342509638
-
Archaeal histones: Structures, stability and DNA binding
-
Reeve JN, Bailey KA, Li WT, Marc F, Sandman K, Soares DJ (2004) Archaeal histones: structures, stability and DNA binding. Biochem Soc Trans 32:227-230
-
(2004)
Biochem Soc Trans
, vol.32
, pp. 227-230
-
-
Reeve, J.N.1
Bailey, K.A.2
Li, W.T.3
Marc, F.4
Sandman, K.5
Soares, D.J.6
-
30
-
-
2342516683
-
Physical and functional interaction of the archaeal singlestranded DNA-binding protein SSB with RNA polymerase
-
Richard DJ, Bell SD, White MF (2004) Physical and functional interaction of the archaeal singlestranded DNA-binding protein SSB with RNA polymerase. Nucleic Acids Res 32:1065-1074
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1065-1074
-
-
Richard, D.J.1
Bell, S.D.2
White, M.F.3
-
31
-
-
33748706963
-
Archaeal histones and the origin of the histone fold
-
Sandman K, Reeve JN (2006) Archaeal histones and the origin of the histone fold. Curr Opin Microbiol 9:520-525
-
(2006)
Curr Opin Microbiol
, vol.9
, pp. 520-525
-
-
Sandman, K.1
Reeve, J.N.2
-
32
-
-
0025301592
-
Hmf, a DNA-binding protein isolated from the hyperthermophilic archaeon Methanothermus-Fervidus, is most closely related to histones
-
Sandman K, Krzycki JA, Dobrinski B, Lurz R, Reeve JN (1990) Hmf, a DNA-binding protein isolated from the hyperthermophilic archaeon Methanothermus-Fervidus, is most closely related to histones. Proc Natl Acad Sci USA 87:5788-5791
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 5788-5791
-
-
Sandman, K.1
Krzycki, J.A.2
Dobrinski, B.3
Lurz, R.4
Reeve, J.N.5
-
33
-
-
0028604578
-
Growth-phase-dependent synthesis of histones in the archaeon Methanothermus-Fervidus
-
Sandman K, Grayling RA, Dobrinski B, Lurz R, Reeve JN (1994) Growth-phase-dependent synthesis of histones in the archaeon Methanothermus-Fervidus. Proc Natl Acad Sci USA 91:12624-12628
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 12624-12628
-
-
Sandman, K.1
Grayling, R.A.2
Dobrinski, B.3
Lurz, R.4
Reeve, J.N.5
-
34
-
-
3242788065
-
Identification of the protein acetyltransferase (Pat) enzyme that acetylates acetyl-CoA synthetase in Salmonella enterica
-
Starai VJ, Escalante-Semerena JC (2004) Identification of the protein acetyltransferase (Pat) enzyme that acetylates acetyl-CoA synthetase in Salmonella enterica. J Mol Biol 340:1005-1012
-
(2004)
J Mol Biol
, vol.340
, pp. 1005-1012
-
-
Starai, V.J.1
Escalante-Semerena, J.C.2
-
35
-
-
0347457075
-
Sir2-dependent activation of acetyl-CoA synthetase by deacetylation of active lysine
-
Starai VJ, Celic I, Cole RN, Boeke JD, Escalante-Semerena JC (2002) Sir2-dependent activation of acetyl-CoA synthetase by deacetylation of active lysine. Science 298:2390-2392
-
(2002)
Science
, vol.298
, pp. 2390-2392
-
-
Starai, V.J.1
Celic, I.2
Cole, R.N.3
Boeke, J.D.4
Escalante-Semerena, J.C.5
-
36
-
-
33750947874
-
Photoreactivation of DNA by an archaeal nucleoprotein Sso7d
-
Tashiro R, Wang A H J, Sugiyama H (2006) Photoreactivation of DNA by an archaeal nucleoprotein Sso7d. Proc Natl Acad Sci USA 103:16655-16659
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 16655-16659
-
-
Tashiro, R.1
Wang, A.H.J.2
Sugiyama, H.3
-
37
-
-
0029954441
-
Preferential binding of the archaebacterial histone-like MC1 protein to negatively supercoiled DNA minicircles
-
Teyssier C, Toulme F, Touzel JP, Maurizot JC, Culard F (1996) Preferential binding of the archaebacterial histone-like MC1 protein to negatively supercoiled DNA minicircles. Biochemistry 35:7954-7958
-
(1996)
Biochemistry
, vol.35
, pp. 7954-7958
-
-
Teyssier, C.1
Toulme, F.2
Touzel, J.P.3
Maurizot, J.C.4
Culard, F.5
-
38
-
-
0028905146
-
Conformational changes of DNA minicircles upon the binding of the archaebacterial histone-like protein MC1
-
Toulme F, Lecam E, Teyssier C, Delain E, Sautiere P, Maurizot JC, Culard F (1995) Conformational changes of DNA minicircles upon the binding of the archaebacterial histone-like protein MC1. J Biol Chem 270:6286-6291
-
(1995)
J Biol Chem
, vol.270
, pp. 6286-6291
-
-
Toulme, F.1
Lecam, E.2
Teyssier, C.3
Delain, E.4
Sautiere, P.5
Maurizot, J.C.6
Culard, F.7
-
39
-
-
0037009516
-
Structure of Alba: An archaeal chromatin protein modulated by acetylation
-
Wardleworth BN, Russell R J M, Bell SD, Taylor GL, White MF (2002) Structure of Alba: an archaeal chromatin protein modulated by acetylation. EMBO J 21:4654-4662
-
(2002)
EMBO J
, vol.21
, pp. 4654-4662
-
-
Wardleworth, B.N.1
Russell, R.J.M.2
Bell, S.D.3
Taylor, G.L.4
White, M.F.5
|