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Volumn 226, Issue , 2011, Pages 227-234

An introduction to spectral distances in networks

Author keywords

distance; graph theory; Network; spectrum

Indexed keywords

CLASSICAL METHODS; DISTANCE; IN NETWORKS; NETWORK; QUANTITATIVE COMPARISON; REAL NETWORKS; SPECTRA'S; SPECTRAL DISTANCES; STATICS AND DYNAMICS; SYNTHETIC NETWORKS;

EID: 78751678280     PISSN: 09226389     EISSN: 18798314     Source Type: Book Series    
DOI: 10.3233/978-1-60750-692-8-227     Document Type: Review
Times cited : (29)

References (30)
  • 2
    • 0035826155 scopus 로고    scopus 로고
    • Exploring complex networks
    • S.H. Strogatz. Exploring complex networks. Nature, 410:268-276, 2001.
    • (2001) Nature , vol.410 , pp. 268-276
    • Strogatz, S.H.1
  • 4
    • 0036013593 scopus 로고    scopus 로고
    • Statistical mechanics of complex networks
    • R. Albert and A.L. Barabási. Statistical mechanics of complex networks. Rev. Mod. Phys., 74:47, 2002.
    • (2002) Rev. Mod. Phys. , vol.74 , pp. 47
    • Albert, R.1    Barabási, A.L.2
  • 5
    • 0038718854 scopus 로고    scopus 로고
    • The structure and function of complex networks
    • M.E.J. Newman. The Structure and Function of Complex Networks. SIAM Review, 45:167-256, 2003.
    • (2003) SIAM Review , vol.45 , pp. 167-256
    • Newman, M.E.J.1
  • 9
    • 34248545722 scopus 로고    scopus 로고
    • The identification of similarities between biological networks: Application to the metabolome and interactome
    • A.P. Cootes, S.H. Muggleton, and M.J.E. Sternberg. The Identification of Similarities between Biological Networks: Application to the Metabolome and Interactome. J. Mol. Biol., 369:1126-1139, 2007.
    • (2007) J. Mol. Biol. , vol.369 , pp. 1126-1139
    • Cootes, A.P.1    Muggleton, S.H.2    Sternberg, M.J.E.3
  • 10
    • 0038699587 scopus 로고    scopus 로고
    • Global protein function prediction from protein-protein interaction networks
    • A. Vazquez, A. Flammini, A. Maritan, and A. Vespignani. Global protein function prediction from protein-protein interaction networks. Nat. Biotechnol., 21:697-700, 2003.
    • (2003) Nat. Biotechnol. , vol.21 , pp. 697-700
    • Vazquez, A.1    Flammini, A.2    Maritan, A.3    Vespignani, A.4
  • 11
    • 33645732240 scopus 로고    scopus 로고
    • Modeling cellular machinery through biological network comparison
    • R. Sharan and T. Ideker. Modeling cellular machinery through biological network comparison. Nat. Biotechnol., 24(4):427-433, 2006.
    • (2006) Nat. Biotechnol. , vol.24 , Issue.4 , pp. 427-433
    • Sharan, R.1    Ideker, T.2
  • 12
    • 70449529712 scopus 로고    scopus 로고
    • Reverse engineering and verification of gene networks
    • F. He, R. Balling, and A.-P. Zeng. Reverse engineering and verification of gene networks. J. Biotechnol, 144:190-203, 2009.
    • (2009) J. Biotechnol. , vol.144 , pp. 190-203
    • He, F.1    Balling, R.2    Zeng, A.-P.3
  • 13
    • 77950910419 scopus 로고    scopus 로고
    • Revealing strengths and weaknesses of methods for gene network inference
    • D. Marbach, R.J. Prill, T. Schaffter, C. Mattiussi, D. Floreano, and G. Stolovitzky. Revealing strengths and weaknesses of methods for gene network inference. PNAS, 107(14):6286-6291, 2010.
    • (2010) PNAS , vol.107 , Issue.14 , pp. 6286-6291
    • Marbach, D.1    Prill, R.J.2    Schaffter, T.3    Mattiussi, C.4    Floreano, D.5    Stolovitzky, G.6
  • 14
    • 67449095889 scopus 로고    scopus 로고
    • Computational methods for discovering gene networks from expression data
    • W.-P. Lee andW.-S. Tzou. Computational methods for discovering gene networks from expression data. Briefings Bioinf., 10(4):408-423, 2009.
    • (2009) Briefings Bioinf. , vol.10 , Issue.4 , pp. 408-423
    • Lee, W.-P.1    Tzou, W.-S.2
  • 15
    • 33749388221 scopus 로고    scopus 로고
    • A characterization of stochastically stable networks
    • O. Tercieux and V. Vannetelbosch. A characterization of stochastically stable networks. Int. J. Game Theory, 34:351-369, 2006.
    • (2006) Int. J. Game Theory , vol.34 , pp. 351-369
    • Tercieux, O.1    Vannetelbosch, V.2
  • 16
    • 66249096692 scopus 로고    scopus 로고
    • The effect of network topology on the stability of discrete state models of genetic control
    • A. Pomerance, E. Ott, M. Girvan, and W. Losert. The effect of network topology on the stability of discrete state models of genetic control. PNAS, 106(20):8209-8214, 2009.
    • (2009) PNAS , vol.106 , Issue.20 , pp. 8209-8214
    • Pomerance, A.1    Ott, E.2    Girvan, M.3    Losert, W.4
  • 17
    • 38349106729 scopus 로고    scopus 로고
    • Algebraic stability indicators for ranked lists in molecular profiling
    • G. Jurman, S. Merler, A. Barla, S. Paoli, A. Galea, and C. Furlanello. Algebraic stability indicators for ranked lists in molecular profiling. Bioinformatics, 24(2):258-264, 2008.
    • (2008) Bioinformatics , vol.24 , Issue.2 , pp. 258-264
    • Jurman, G.1    Merler, S.2    Barla, A.3    Paoli, S.4    Galea, A.5    Furlanello, C.6
  • 18
    • 34249683912 scopus 로고    scopus 로고
    • Spectral plots and the representation and interpretation of biological data
    • Print 1611-7530 Online
    • A. Banerjee and J. Jost. Spectral plots and the representation and interpretation of biological data. Theory in Biosciences, 126(1):1431-7613 (Print) 1611-7530 (Online), 2007.
    • (2007) Theory in Biosciences , vol.126 , Issue.1 , pp. 1431-7613
    • Banerjee, A.1    Jost, J.2
  • 19
    • 67349157147 scopus 로고    scopus 로고
    • Graph spectra as a systematic tool in computational biology
    • A. Banerjee and J. Jost. Graph spectra as a systematic tool in computational biology. Discrete Appl. Math., 157(10):2425-2431, 2009.
    • (2009) Discrete Appl. Math. , vol.157 , Issue.10 , pp. 2425-2431
    • Banerjee, A.1    Jost, J.2
  • 21
    • 78751677220 scopus 로고    scopus 로고
    • Detecting changes in time series of network graphs using minimum mean squared error and cumulative summation
    • In W. Read and A.J. Roberts editors
    • B. Pincombe. Detecting changes in time series of network graphs using minimum mean squared error and cumulative summation. In W. Read and A.J. Roberts, editors, Proc. of the 13th Biennial Computational Techniques and Applications Conference, CTAC-2006, pages C450-C473, 2007.
    • (2007) Proc. of the 13th Biennial Computational Techniques and Applications Conference CTAC-2006
    • Pincombe, B.1
  • 22
    • 41349099571 scopus 로고    scopus 로고
    • Evolutionary reconstruction of networks
    • M. Ipsen and A.S. Mikhailov. Evolutionary reconstruction of networks. Phys. Rev. E, 66(4):046109, 2002.
    • (2002) Phys. Rev. E , vol.66 , Issue.4 , pp. 046109
    • Ipsen, M.1    Mikhailov, A.S.2
  • 23
    • 84898481266 scopus 로고    scopus 로고
    • A study of graph spectra for comparing graphs
    • InW. Clocksin A. Fitzgibbon and P. Torr editors
    • P. Zhu and R.C.Wilson. A study of graph spectra for comparing graphs. InW. Clocksin, A. Fitzgibbon, and P. Torr, editors, Proc. of the 16-th British Machine Vision Conference, 2005.
    • (2005) Proc. of the 16-th British Machine Vision Conference
    • Zhu, P.1    Wilson, R.C.2
  • 24
    • 50849099485 scopus 로고    scopus 로고
    • Spectral reconstruction of complex networks
    • F. Comellas and J. Diaz-Lopez. Spectral reconstruction of complex networks. Physica A, 387:6436-6442, 2008.
    • (2008) Physica A , vol.387 , pp. 6436-6442
    • Comellas, F.1    Diaz-Lopez, J.2
  • 27
    • 0036104165 scopus 로고    scopus 로고
    • Extremal metrics on graphs I
    • D. Jakobson and I. Rivin. Extremal metrics on graphs, I. Forum Math., 14(1):147-163, 2002.
    • (2002) Forum Math. , vol.14 , Issue.1 , pp. 147-163
    • Jakobson, D.1    Rivin, I.2
  • 29
    • 0036578795 scopus 로고    scopus 로고
    • Network motifs in the transcriptional regulation network of escherichia coli
    • S.S. Shen-Orr, R. Milo, S. Mangan, and U. Alon. Network motifs in the transcriptional regulation network of Escherichia coli. Nat. Genet., 31:64-68, 2002.
    • (2002) Nat. Genet. , vol.31 , pp. 64-68
    • Shen-Orr, S.S.1    Milo, R.2    Mangan, S.3    Alon, U.4
  • 30
    • 67649855560 scopus 로고    scopus 로고
    • Global network properties
    • In B.H. Junker and F. Schreiber editors Wiley
    • R. Steuer and G. Zamora Lopez. Global network properties. In B.H. Junker and F. Schreiber, editors, Analysis of biological networks, pages 31-64. Wiley, 2008.
    • (2008) Analysis of Biological Networks , pp. 31-64
    • Steuer, R.1    Zamora Lopez, G.2


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