Identifying unique populations in long-dispersal marine species: Gulfs as priority conservation areas

Biological Conservation

Volumn 144, Issue 1, 2011, Pages 330-338

  Machado Schiaffino, Gonzalo ^a   Juanes, Francis ^b   Garcia Vazquez, Eva ^a  

^a UNIVERSITY OF OVIEDO   (Spain)

^b UNIVERSITY OF MASSACHUSETTS   (United States)

Author keywords

Conservation targets; Gulf; Hake species; Merluccius bilinearis; Merluccius hubbsi; Microsatellite loci; Mitochondrial DNA; Population structure

Indexed keywords

CONSERVATION MANAGEMENT; DEMERSAL FISH; GADOID; GENE FLOW; GENETIC MARKER; MARINE ECOSYSTEM; MARINE PARK; OPEN OCEAN; PELAGIC FISH; POPULATION STRUCTURE; STOCK ASSESSMENT;

ATLANTIC OCEAN;

MERLUCCIUS BILINEARIS; MERLUCCIUS HUBBSI; REXEA SOLANDRI;

EID: 78751584777     PISSN: 00063207     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.biocon.2010.09.010     Document Type: Article

References (57)

1. Alheit J., Pitcher T.J. Hake: Fisheries, Ecology, and Markets 1995, Chapman and Hall, London.
2. Bandelt H.J., Foster P., Rohl A. Median-joining networks for inferring intraspecific phylogenies. Molecular Biology and Evolution 1999, 16:37-48.
3. Banks S.C., Piggott L.M., Williamson J.E., Bové U., Holbrook N.J., Beheregaray L.B. Oceanic variability and coastal topography shape genetic structure in a long-dispersing sea urchin. Ecology 2007, 88(12):3055-3064.
4. Beerli P., Felsenstein J. Maximum likelihood estimation of migration rates and population numbers of two populations using a coalescent approach. Genetics 1999, 152:763-773.
5. Bernardi G., Findley L., Rocha-Olivares A. Vicariance and dispersal across Baja California in disjunct marine fish populations. Evolution 2003, 57:1599-1609.
6. Bezzi S.I., Verazay G.A., Dato C.V. Biology and fisheries of Argentine hakes (M. hubbsi and M. australis). Hake: Fisheries, Ecology, and Markets 1995, 239-267. Chapman and Hall, London. J. Alheit, T.J. Pitcher (Eds.).
7. Birky C.W., Fuerst P., Maruyama T. Organelle gene diversity under migration, mutation and drift: equilibrium expectations, approach to equilibrium, effects of heteroplasmic cells and comparison to nuclear genes. Genetics 1989, 121:613-627.
8. Castillo A.G.F., Martinez J.L., Garcia-Vazquez E. Fine spatial structure of Atlantic hake (Merluccius merluccius) stocks revealed by variation at microsatellite loci. Marine Biotechnology 2004, 6:299-306.
9. Castillo A.G.F., Alvarez P., Garcia-Vazquez E. Population structure of Merluccius merluccius along the Iberian Peninsula coast. ICES Journal of Marine Science 2005, 62:1699-1704.
10. Cimmaruta R., Bondanelli P., Nascetti G. Genetic structure and environmental heterogeneity in the European hake (Merluccius merluccius). Molecular Ecology 2005, 14:2577-2591.
11. Crowder L.B., Lyman S.J., Figueira W.F., Priddy J. Source-sink population dynamics and the problem of siting marine reserves. Bulletin of Marine Science 2000, 66:799-820.
12. D'Amato M.E. Demographic expansion and subtle differentiation in the long-tailed hake Macruronus magellanicus: evidence from microsatellite data. Marine Biotechnology 2006, 8:189-201.
13. Di Giácomo E.E., Calvo J., Perier M.R., Morriconi E. Spawning aggregations of Merluccius hubbsi, in Patagonian waters: evidence for a single stock?. Fisheries Research 1993, 16:9-16.
14. Ehrlich, M., 1998. Areas de desove y cría de merluza Merluccius hubbsi en el Golfo San Matías. Evidencias de un stock independiente al de la plataforma, p. 8 (INIDEP).
15. Estoup A., Largiadèr C.R., Perrot E., Chourrout D. Rapid one-tube DNA extraction for reliable PCR detection of fish polymorphic marker and transgenes. Molecular Marine Biology and Biotechnology 1996, 5:295-298.
16. Estoup A., Angers B. Microsatellites and minisatellites for molecular ecology: theoretical and practical applications. Advances in Molecular Ecology 1998, 55-86. IOS Press, Amsterdam. G. Muyzer, G.R. Carvalho (Eds.).
17. Fu Y.X. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 1997, 147:915-925.
18. Galleguillos R., Troncoso L., Oyarzún C., Astorga M., Peñaloza M. Genetic differentiation in Chilean hake Merluccius gayi gayi (Pisces: Merlucciidae). Hydrobiologia 2000, 420:49-54.
19. Game E.T., Grantham H.S., Hobday A.J., Pressey R.L., Lombard A.T., Beckley L.E., Gjerde K., Bustamante R., Possingham H.P., Richardson A.J. Pelagic protected areas: the missing dimension in ocean conservation. Trends in Ecology and Evolution 2009, 24:360-369.
20. González-Suárez M., Flatz R., Aurioles-Gamboa D., Hedrick P.W., Gerber L.R. Isolation by distance among California sea lion populations in Mexico: redefining management stocks. Molecular Ecology 2009, 18(6):1088-1099.
21. Graur D., Li W.H. Fundamentals of Molecular Evolution 2000, Sinuaer Associates, Sunderland, MA.
22. Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 1999, 41:95-98.
23. Harpending R.C. Signature of ancient population growth in a low resolution mitochondrial DNA mismatch distribution. Human Biology 1994, 66:591-600.
24. Helser T.E., Almeida F.P., Waldron D.E. Biology and fisheries of north-west Atlantic hake (silver hake: M. bilinearis). Hake: Fisheries, Ecology, and Markets 1995, 203-237. Chapman and Hall, London. J. Alheit, T.J. Pitcher (Eds.).
25. Houghton S.D., Guptha M.V.S. Monsoonal and fertility controls on recent marginal sea and continental-shelf coccolith assemblages from the eastern Pacific and northern Indian oceans. Marine Geology 1991, 97:251-259.
26. Kenchington E.L., Harding G.C., Jones M.W., Prodöhl P.A. Pleistocene glaciation events shape genetic structure across the range of the American lobster, Homarus americanus. Molecular Ecology 2009, 18(8):1654-1667.
27. Lock, M.C., Packer, D.B., 2004. Silver hake, Merluccius bilinearis, life history and habitat characteristics. NOAA Technical Memorandum NMFS-NE, second ed., vol. 186, pp. 1-67.
28. Lundy C.J., Morán P., Millner R., Rico C., Hewitt G. Macrogeographic population differentiation in oceanic environments: a case study of European hake (Merluccius merluccius), a commercially important fish. Molecular Ecology 1999, 8:1889-1898.
29. Lundy C.J., Rico C., Hewitt G.M. Temporal and spatial genetic variation in spawning grounds of European hake (Merluccius merluccius) in the Bay of Biscay. Molecular Ecology 2000, 9:2067-2079.
30. Machado-Schiaffino G., Garcia-Vazquez E. Isolation and characterization of microsatellite loci in Merluccius australis and cross-species amplification. Molecular Ecology Resources 2009, 9:585-587.
31. Machado-Schiaffino G., Campo D., Garcia-Vazquez E. Strong genetic differentiation of the Austral hake (Merluccius australis) across the species range. Molecular Phylogenetics and Evolution 2009, 53:351-356.
32. Machado-Schiaffino G., Juanes F., Garcia-Vazquez E. Introgressive hybridization in North American hakes after secondary contact. Molecular Phylogenetics and Evolution 2010, 55:552-558.
33. Manni F., Guérard E., Heyer E. Geographic patterns of (genetic, morphologic, linguistic) variation: how barriers can be detected by " Monmonier's algorithm" Human Biology 2004, 76(2):173-190.
34. Mathews L.M. Cryptic biodiversity and phylogeographical patterns in a snapping shrimp species complex. Molecular Ecology 2006, 15(13):4049-4063.
35. Mills L.S., Allendorf F.W. The one-migrant-per-generation rule in conservation and management. Conservation Biology 1996, 10:1509-1518.
36. Morán P., Lundy C.J., Rico C., Hewitt G.M. Isolation and characterization of microsatellite loci in European hake, Merluccius merluccius (Merlucidae, Teleostei). Molecular Ecology 1999, 8:1357-1358.
37. Morse W.W., Johnson D.L., Berrrien P.L., Wilk S.J. Silver hake, Merluccius bilinearis, life history and habitat characteristics. NOAA Technical Memorandum NMFS-NE 1999, 135:1-42.
38. Nei M. Molecular Evolutionary Genetics 1987, Columbia University Press, New York.
39. Nielsen E.E., Nielsen P.H., Meldrup D., Hansen M.M. Genetic population structure of turbot (Scophthalmus maximus L.) supports the presence of multiple hybrid zones for marine fishes in the transition zone between the Baltic Sea and the North Sea. Molecular Ecology 2004, 13(3):585-595.
40. Palumbi S. Genetic divergence, reproductive isolation and marine speciation. Annual Review of Ecology and Systematics 1994, 25:547-572.
41. Patarnello T., Volckaert F.A., Castilho R. Pillars of Hercules: is the Atlantic-Mediterranean transition a phylogeographical break?. Molecular Ecology 2007, 16:4426-4444.
42. Planes S., Jones G.P., Thorrold S.R. Larval dispersal connects fish populations in a network of marine protected areas. Proceedings of the National Academy of Sciences of the United States of America 2009, 106(14):5693-5697.
43. Posada, D., 2004. Collapse1.2. Program free. .
44. Raymond M., Rousset F. GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity 1995, 86:248-249.
45. Rice W.R. Analyzing tables of statistical tests. Evolution 1989, 43:223-225.
46. Rico C., Ibrahim K.M., Rico I., Hewitt G.M. Stock composition in North Atlantic populations of whiting using microsatellite markers. Journal of Fish Biology 1997, 51:462-475.
47. Roldan M.I. Enzymatic polymorphisms in the Argentinian hake, Merluccius hubbsi Marini, of the Argentinian continental shelf. Journal of Fish Biology 1991, 39:53-59.
48. Roldan M.I., Garcia-Marin J.L., Utter H.M., Pla C. Genetic relationships among Merluccius species. Heredity 1999, 83:79-86.
49. Rönkkönen S., Ojaveer E., Raid T., Viitasalo M. Long-term changes in Baltic herring (Clupea harengus membras) growth in the Gulf of Finland. Canadian Journal of Fisheries and Aquatic Sciences 2004, 61:219-229.
50. Ruzzante D.E., Taggart C.Y., Cook D. A nuclear DNA basis for shelf and bank-scale population structure in Northwest Atlantic cod (Gadus morhua): Labrador to George's Bank. Molecular Ecology 1998, 7:1663-1680.
51. Sardella N.H., Timi J.T. Parasites of Argentine hake in the Argentine Sea: population and infracommunity structure as evidence for host stock discrimination. Journal of Fish Biology 2004, 65:1472-1488.
52. Schneider S., Roessli D., Excoffier L. Arlequin Ver. 2000: A Software for Population Genetics Data Analysis 2000, Genetics and Biometry Laboratory, University of Geneva, Switzerland.
53. Tajima F. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 1989, 123:585-595.
54. Thompson J.D., Higgins D.G., Gibson T.J. CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Research 1994, 22:4673-4680.
55. Van Oosterhout C., William F., Hutchinson D.P., Wills M., Shipley P. Micro-Checker: software for identifying and correcting genotyping errors in microsatellite data. Molecular Ecology Notes 2004, 4:535-538.
56. von der Heyden S., Lipinski M.R., Matthee C.A. Mitochondrial DNA analyses of the Cape hakes reveal an expanding, panmictic population for Merluccius capensis and population structuring for mature fish in Merluccius paradoxus. Molecular Phylogenetics and Evolution 2007, 42:517-527.
57. von der Heyden S., Prochazka K., Bowie R.C. Significant population structure and asymmetric gene flow patterns amidst expanding populations of Clinus cottoides (Perciformes, Clinidae): application of molecular data to marine conservation planning in South Africa. Molecular Ecology 2008, 17(22):4812-4826.