메뉴 건너뛰기




Volumn 35, Issue 2, 2011, Pages 93-101

The impact of self-identified race on epidemiologic studies of gene expression

Author keywords

Ancestry; Gene expression; Population stratification; Self identified race

Indexed keywords

RNA;

EID: 78751488208     PISSN: 07410395     EISSN: 10982272     Source Type: Journal    
DOI: 10.1002/gepi.20560     Document Type: Article
Times cited : (13)

References (53)
  • 1
    • 0029090616 scopus 로고
    • Standardization of spirometry, 1994 update
    • American Thoracic Society
    • American Thoracic Society. 1995. Standardization of spirometry, 1994 update. Am J Respir Crit Care Med 152:1107-1136.
    • (1995) Am J Respir Crit Care Med , vol.152 , pp. 1107-1136
  • 2
    • 34347326155 scopus 로고    scopus 로고
    • On the design and analysis of gene expression studies in human populations
    • author reply 808-809.
    • Akey JM, Biswas S, Leek JT, Storey JD. 2007. On the design and analysis of gene expression studies in human populations. Nat Genet 39:807-808; author reply 808-809.
    • (2007) Nat Genet , vol.39 , pp. 807-808
    • Akey, J.M.1    Biswas, S.2    Leek, J.T.3    Storey, J.D.4
  • 4
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. 1995. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc 57:289-300.
    • (1995) J R Stat Soc , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 8
    • 68949211709 scopus 로고    scopus 로고
    • Genetics of human gene expression: mapping DNA variants that influence gene expression
    • Cheung VG, Spielman RS. 2009. Genetics of human gene expression: mapping DNA variants that influence gene expression. Nat Rev Genet 10:595-604.
    • (2009) Nat Rev Genet , vol.10 , pp. 595-604
    • Cheung, V.G.1    Spielman, R.S.2
  • 10
    • 0033012176 scopus 로고    scopus 로고
    • The Childhood Asthma Management Program (CAMP): design, rationale, and methods
    • Childhood Asthma Management Program Research Group
    • Childhood Asthma Management Program Research Group. 1999. The Childhood Asthma Management Program (CAMP): design, rationale, and methods. Control Clin Trials 20:91-120.
    • (1999) Control Clin Trials , vol.20 , pp. 91-120
  • 12
    • 33847655715 scopus 로고    scopus 로고
    • Race: a risk factor for dengue hemorrhagic fever
    • de la CSB, Kouri G, Guzman MG. 2007. Race: a risk factor for dengue hemorrhagic fever. Arch Virol 152:533-542.
    • (2007) Arch Virol , vol.152 , pp. 533-542
    • de la, C.S.B.1    Kouri, G.2    Guzman, M.G.3
  • 13
    • 0035528921 scopus 로고    scopus 로고
    • Genomic control, a new approach to genetic-based association studies
    • Devlin B, Roeder K, Wasserman L. 2001. Genomic control, a new approach to genetic-based association studies. Theor Popul Biol 60:155-166.
    • (2001) Theor Popul Biol , vol.60 , pp. 155-166
    • Devlin, B.1    Roeder, K.2    Wasserman, L.3
  • 14
    • 70450222707 scopus 로고    scopus 로고
    • Sequence variations of ABCB1, SLC6A2, SLC6A3, SLC6A4, CREB1, CRHR1 and NTRK2: association with major depression and antidepressant response in Mexican-Americans
    • Dong C, Wong ML, Licinio J. 2009. Sequence variations of ABCB1, SLC6A2, SLC6A3, SLC6A4, CREB1, CRHR1 and NTRK2: association with major depression and antidepressant response in Mexican-Americans. Mol Psychiatry 14:1105-1118.
    • (2009) Mol Psychiatry , vol.14 , pp. 1105-1118
    • Dong, C.1    Wong, M.L.2    Licinio, J.3
  • 15
    • 77949353338 scopus 로고    scopus 로고
    • Contribution of genome-wide HCV genetic differences to outcome of interferon-based therapy in Caucasian American and African American patients
    • Donlin MJ, Cannon NA, Aurora R, Li J, Wahed AS, Di Bisceglie AM, Tavis JE. 2010. Contribution of genome-wide HCV genetic differences to outcome of interferon-based therapy in Caucasian American and African American patients. PLoS One 5:e9032.
    • (2010) PLoS One , vol.5
    • Donlin, M.J.1    Cannon, N.A.2    Aurora, R.3    Li, J.4    Wahed, A.S.5    Di Bisceglie, A.M.6    Tavis, J.E.7
  • 16
    • 46249088370 scopus 로고    scopus 로고
    • lumi: a pipeline for processing Illumina microarray
    • Du P, Kibbe WA, Lin SM. 2008. lumi: a pipeline for processing Illumina microarray. Bioinformatics 24:1547-1548.
    • (2008) Bioinformatics , vol.24 , pp. 1547-1548
    • Du, P.1    Kibbe, W.A.2    Lin, S.M.3
  • 21
    • 0344765507 scopus 로고    scopus 로고
    • Repression of the PKR protein kinase by the hepatitis C virus NS5A protein: a potential mechanism of interferon resistance
    • Gale Jr MJ, Korth MJ, Katze MG. 1998. Repression of the PKR protein kinase by the hepatitis C virus NS5A protein: a potential mechanism of interferon resistance. Clin Diagn Virol 10:157-162.
    • (1998) Clin Diagn Virol , vol.10 , pp. 157-162
    • Gale Jr, M.J.1    Korth, M.J.2    Katze, M.G.3
  • 22
    • 0032914156 scopus 로고    scopus 로고
    • Identification and isolation of differentially expressed genes from very small tissue samples
    • 888-892.
    • Gonzalez P, Zigler Jr JS, Epstein DL, Borras T. 1999. Identification and isolation of differentially expressed genes from very small tissue samples. Biotechniques 26:884-886, 888-892.
    • (1999) Biotechniques , vol.26 , pp. 884-886
    • Gonzalez, P.1    Zigler Jr, J.S.2    Epstein, D.L.3    Borras, T.4
  • 23
    • 0034704593 scopus 로고    scopus 로고
    • Control of TH2 polarization by the chemokine monocyte chemoattractant protein-1
    • Gu L, Tseng S, Horner RM, Tam C, Loda M, Rollins BJ. 2000. Control of TH2 polarization by the chemokine monocyte chemoattractant protein-1. Nature 404:407-411.
    • (2000) Nature , vol.404 , pp. 407-411
    • Gu, L.1    Tseng, S.2    Horner, R.M.3    Tam, C.4    Loda, M.5    Rollins, B.J.6
  • 24
    • 60549110715 scopus 로고    scopus 로고
    • Screening and association testing of common coding variation in steroid hormone receptor co-activator and co-repressor genes in relation to breast cancer risk: the Multiethnic Cohort
    • Haiman CA, Garcia RR, Hsu C, Xia L, Ha H, Sheng X, Le Marchand L, Kolonel LN, Henderson BE, Stallcup MR, et al. 2009. Screening and association testing of common coding variation in steroid hormone receptor co-activator and co-repressor genes in relation to breast cancer risk: the Multiethnic Cohort. BMC Cancer 9:43.
    • (2009) BMC Cancer , vol.9 , pp. 43
    • Haiman, C.A.1    Garcia, R.R.2    Hsu, C.3    Xia, L.4    Ha, H.5    Sheng, X.6    Le Marchand, L.7    Kolonel, L.N.8    Henderson, B.E.9    Stallcup, M.R.10
  • 25
    • 0035055544 scopus 로고    scopus 로고
    • The family based association test method: strategies for studying general genotype-phenotype associations
    • Horvath S, Xu X, Laird NM. 2001. The family based association test method: strategies for studying general genotype-phenotype associations. Eur J Hum Genet 9:301-306.
    • (2001) Eur J Hum Genet , vol.9 , pp. 301-306
    • Horvath, S.1    Xu, X.2    Laird, N.M.3
  • 26
    • 11244346557 scopus 로고    scopus 로고
    • Variance stabilization applied to microarray data calibration and to the quantification of differential expression
    • Huber W, von Heydebreck A, Sultmann H, Poustka A, Vingron M. 2002. Variance stabilization applied to microarray data calibration and to the quantification of differential expression. Bioinformatics 18:S96-S104.
    • (2002) Bioinformatics , vol.18
    • Huber, W.1    von Heydebreck, A.2    Sultmann, H.3    Poustka, A.4    Vingron, M.5
  • 28
    • 0034613767 scopus 로고    scopus 로고
    • Induction of interleukin 10-producing, nonproliferating CD4(+) T cells with regulatory properties by repetitive stimulation with allogeneic immature human dendritic cells
    • Jonuleit H, Schmitt E, Schuler G, Knop J, Enk AH. 2000. Induction of interleukin 10-producing, nonproliferating CD4(+) T cells with regulatory properties by repetitive stimulation with allogeneic immature human dendritic cells. J Exp Med 192:1213-1222.
    • (2000) J Exp Med , vol.192 , pp. 1213-1222
    • Jonuleit, H.1    Schmitt, E.2    Schuler, G.3    Knop, J.4    Enk, A.H.5
  • 29
    • 62349132210 scopus 로고    scopus 로고
    • Racial and sex differences in chronic obstructive pulmonary disease susceptibility, diagnosis, and treatment
    • Kirkpatrick P, Dransfield MT. 2009. Racial and sex differences in chronic obstructive pulmonary disease susceptibility, diagnosis, and treatment. Curr Opin Pulm Med 15:100-104.
    • (2009) Curr Opin Pulm Med , vol.15 , pp. 100-104
    • Kirkpatrick, P.1    Dransfield, M.T.2
  • 31
    • 39149111937 scopus 로고    scopus 로고
    • Model-based variance-stabilizing transformation for Illumina microarray data
    • Lin SM, Du P, Huber W, Kibbe WA. 2008. Model-based variance-stabilizing transformation for Illumina microarray data. Nucleic Acids Res 36:e11.
    • (2008) Nucleic Acids Res , vol.36
    • Lin, S.M.1    Du, P.2    Huber, W.3    Kibbe, W.A.4
  • 32
    • 45549107737 scopus 로고    scopus 로고
    • Ethnic differences in the risks of adverse reactions to drugs used in the treatment of psychoses and depression: a systematic review and meta-analysis
    • Ormerod S, McDowell SE, Coleman JJ, Ferner RE. 2008. Ethnic differences in the risks of adverse reactions to drugs used in the treatment of psychoses and depression: a systematic review and meta-analysis. Drug Saf 31:597-607.
    • (2008) Drug Saf , vol.31 , pp. 597-607
    • Ormerod, S.1    McDowell, S.E.2    Coleman, J.J.3    Ferner, R.E.4
  • 40
    • 18944393448 scopus 로고    scopus 로고
    • Assessing the False Discovery Rate in a Statistical Analysis of Gene Expression Data
    • Dortmund: University of Dortmund.
    • Schwender H. 2003. Assessing the False Discovery Rate in a Statistical Analysis of Gene Expression Data. Dortmund: University of Dortmund.
    • (2003)
    • Schwender, H.1
  • 41
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical bayes methods for assessing differential expression in microarray experiments
    • Article3.
    • Smyth GK. 2004. Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 3:Article3.
    • (2004) Stat Appl Genet Mol Biol , vol.3
    • Smyth, G.K.1
  • 43
    • 34249847958 scopus 로고    scopus 로고
    • pcaMethods-a bioconductor package providing PCA methods for incomplete data
    • Stacklies W, Redestig H, Scholz M, Walther D, Selbig J. 2007. pcaMethods-a bioconductor package providing PCA methods for incomplete data. Bioinformatics 23:1164-1167.
    • (2007) Bioinformatics , vol.23 , pp. 1164-1167
    • Stacklies, W.1    Redestig, H.2    Scholz, M.3    Walther, D.4    Selbig, J.5
  • 47
    • 64149130397 scopus 로고    scopus 로고
    • Long-term budesonide or nedocromil treatment, once discontinued, does not alter the course of mild to moderate asthma in children and adolescents
    • Strunk RC, Sternberg AL, Szefler SJ, Zeiger RS, Bender B, Tonascia J. 2009. Long-term budesonide or nedocromil treatment, once discontinued, does not alter the course of mild to moderate asthma in children and adolescents. J Pediatr 154:682-687.
    • (2009) J Pediatr , vol.154 , pp. 682-687
    • Strunk, R.C.1    Sternberg, A.L.2    Szefler, S.J.3    Zeiger, R.S.4    Bender, B.5    Tonascia, J.6
  • 48
    • 0034642066 scopus 로고    scopus 로고
    • Long-term effects of budesonide or nedocromil in children with asthma
    • The Childhood Asthma Management Program Research Group
    • The Childhood Asthma Management Program Research Group. 2000. Long-term effects of budesonide or nedocromil in children with asthma. N Engl J Med 343:1054-1063.
    • (2000) N Engl J Med , vol.343 , pp. 1054-1063
  • 49
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher VG, Tibshirani R, Chu G. 2001. Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci USA 98:5116-5121.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 51
    • 67349226308 scopus 로고    scopus 로고
    • Cytokine SNPs: comparison of allele frequencies by race and implications for future studies
    • Van Dyke AL, Cote ML, Wenzlaff AS, Land S, Schwartz AG. 2009. Cytokine SNPs: comparison of allele frequencies by race and implications for future studies. Cytokine 46:236-244.
    • (2009) Cytokine , vol.46 , pp. 236-244
    • Van Dyke, A.L.1    Cote, M.L.2    Wenzlaff, A.S.3    Land, S.4    Schwartz, A.G.5
  • 53
    • 2442534666 scopus 로고    scopus 로고
    • Minor histocompatibility antigen DBY elicits a coordinated B and T cell response after allogeneic stem cell transplantation
    • Zorn E, Miklos DB, Floyd BH, Mattes-Ritz A, Guo L, Soiffer RJ, Antin JH, Ritz J. 2004. Minor histocompatibility antigen DBY elicits a coordinated B and T cell response after allogeneic stem cell transplantation. J Exp Med 199:1133-1142.
    • (2004) J Exp Med , vol.199 , pp. 1133-1142
    • Zorn, E.1    Miklos, D.B.2    Floyd, B.H.3    Mattes-Ritz, A.4    Guo, L.5    Soiffer, R.J.6    Antin, J.H.7    Ritz, J.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.