-
1
-
-
0030589683
-
Ultrastructure of the nucleus in relation to transcription and splicing: roles of perichromatin fibrils and interchromatin granules
-
Puvion E., PuvionDutilleul F. Ultrastructure of the nucleus in relation to transcription and splicing: roles of perichromatin fibrils and interchromatin granules. Exp. Cell Res. 1996, 229:217-225.
-
(1996)
Exp. Cell Res.
, vol.229
, pp. 217-225
-
-
Puvion, E.1
PuvionDutilleul, F.2
-
2
-
-
4544304312
-
The functional architecture of the nucleus as analysed by ultrastructural cytochemistry
-
Fakan S. The functional architecture of the nucleus as analysed by ultrastructural cytochemistry. Histochem. Cell Biol. 2004, 122:83-93.
-
(2004)
Histochem. Cell Biol.
, vol.122
, pp. 83-93
-
-
Fakan, S.1
-
3
-
-
35649020707
-
The perichromatin region: a functional compartment in the nucleus that determines large-scale chromatin folding
-
Fakan S., van Driel R. The perichromatin region: a functional compartment in the nucleus that determines large-scale chromatin folding. Semin. Cell Dev. Biol. 2007, 18:676-681.
-
(2007)
Semin. Cell Dev. Biol.
, vol.18
, pp. 676-681
-
-
Fakan, S.1
van Driel, R.2
-
4
-
-
62149151774
-
Spatial organization of nucleotide excision repair proteins after UV-induced DNA damage in the human cell nucleus
-
Solimando L., Luijsterburg M.S., Vecchio L., Vermeulen W., van Driel R., Fakan S. Spatial organization of nucleotide excision repair proteins after UV-induced DNA damage in the human cell nucleus. J. Cell Sci. 2009, 122:83-91.
-
(2009)
J. Cell Sci.
, vol.122
, pp. 83-91
-
-
Solimando, L.1
Luijsterburg, M.S.2
Vecchio, L.3
Vermeulen, W.4
van Driel, R.5
Fakan, S.6
-
5
-
-
0015091214
-
Localisation of rapidly and slowly labelled nuclear RNA as visualized by high resolution autoradiography
-
Fakan S., Bernhard W. Localisation of rapidly and slowly labelled nuclear RNA as visualized by high resolution autoradiography. Exp. Cell Res. 1971, 67:129-141.
-
(1971)
Exp. Cell Res.
, vol.67
, pp. 129-141
-
-
Fakan, S.1
Bernhard, W.2
-
6
-
-
0014510121
-
Fine structural organization of the interphase nucleus in some mammalian cells
-
Monneron A., Bernhard W. Fine structural organization of the interphase nucleus in some mammalian cells. J. Ultrastruct. Res. 1969, 27:266-288.
-
(1969)
J. Ultrastruct. Res.
, vol.27
, pp. 266-288
-
-
Monneron, A.1
Bernhard, W.2
-
7
-
-
0014510120
-
A new staining procedure for electron microscopical cytology
-
Bernhard W. A new staining procedure for electron microscopical cytology. J. Ultrastruct. Res. 1969, 27:250-265.
-
(1969)
J. Ultrastruct. Res.
, vol.27
, pp. 250-265
-
-
Bernhard, W.1
-
8
-
-
0016776807
-
Perichromatin fibrils as components of rapidly labeled extranucleolar RNA
-
Nash R.E., Puvion E., Bernhard W. Perichromatin fibrils as components of rapidly labeled extranucleolar RNA. J. Ultrastruct. Res. 1975, 53:395-405.
-
(1975)
J. Ultrastruct. Res.
, vol.53
, pp. 395-405
-
-
Nash, R.E.1
Puvion, E.2
Bernhard, W.3
-
9
-
-
0017169932
-
Localization and characterization of newly synthesized nuclear RNA in isolated rat hepatocytes
-
Fakan S., Puvion E., Spohr G. Localization and characterization of newly synthesized nuclear RNA in isolated rat hepatocytes. Exp. Cell Res. 1976, 99:155-164.
-
(1976)
Exp. Cell Res.
, vol.99
, pp. 155-164
-
-
Fakan, S.1
Puvion, E.2
Spohr, G.3
-
10
-
-
0028158279
-
Perichromatin fibrils are in situ forms of nascent transcripts
-
Fakan S. Perichromatin fibrils are in situ forms of nascent transcripts. Trends Cell Biol. 1994, 4:86-90.
-
(1994)
Trends Cell Biol.
, vol.4
, pp. 86-90
-
-
Fakan, S.1
-
11
-
-
0030589482
-
Nuclear organization and gene expression
-
Spector D.L. Nuclear organization and gene expression. Exp. Cell Res. 1996, 229:189-197.
-
(1996)
Exp. Cell Res.
, vol.229
, pp. 189-197
-
-
Spector, D.L.1
-
12
-
-
0042767995
-
The dynamics of chromosome organization and gene regulation
-
Spector D.L. The dynamics of chromosome organization and gene regulation. Annu. Rev. Biochem. 2003, 72:573-608.
-
(2003)
Annu. Rev. Biochem.
, vol.72
, pp. 573-608
-
-
Spector, D.L.1
-
13
-
-
38149093150
-
Perichromatin fibrils as early markers of transcriptional alterations
-
Biggiogera M., Cisterna B., Spedito A., Vecchio L., Malatesta M. Perichromatin fibrils as early markers of transcriptional alterations. Differentiation 2008, 76:57-65.
-
(2008)
Differentiation
, vol.76
, pp. 57-65
-
-
Biggiogera, M.1
Cisterna, B.2
Spedito, A.3
Vecchio, L.4
Malatesta, M.5
-
14
-
-
0032917782
-
Ultrastructural analysis of transcription and splicing in the cell nucleus after bromo-UTP microinjection
-
Cmarko D., Verschure P.J., Martin T.E., Dahmus M.E., Krause S., Fu X.D., Van Driel R., Fakan S. Ultrastructural analysis of transcription and splicing in the cell nucleus after bromo-UTP microinjection. Mol. Biol. Cell 1999, 10:211-223.
-
(1999)
Mol. Biol. Cell
, vol.10
, pp. 211-223
-
-
Cmarko, D.1
Verschure, P.J.2
Martin, T.E.3
Dahmus, M.E.4
Krause, S.5
Fu, X.D.6
Van Driel, R.7
Fakan, S.8
-
15
-
-
0042335997
-
Visualization of transcription sites at the electron microscope
-
Trentani A., Testillano P.S., Risueno M.C., Biggiogera M. Visualization of transcription sites at the electron microscope. Eur. J. Histochem. 2003, 47:195-200.
-
(2003)
Eur. J. Histochem.
, vol.47
, pp. 195-200
-
-
Trentani, A.1
Testillano, P.S.2
Risueno, M.C.3
Biggiogera, M.4
-
16
-
-
0021334795
-
Ultrastructural distribution of nuclear ribonucleoproteins as visualized by immunocytochemistry on thin sections
-
Fakan S., Leser G., Martin T.E. Ultrastructural distribution of nuclear ribonucleoproteins as visualized by immunocytochemistry on thin sections. J. Cell Biol. 1984, 98:358-363.
-
(1984)
J. Cell Biol.
, vol.98
, pp. 358-363
-
-
Fakan, S.1
Leser, G.2
Martin, T.E.3
-
17
-
-
0025936626
-
Associations between distinct pre-mRNA splicing components and the cell nucleus
-
Spector D.L., Fu X.D., Maniatis T. Associations between distinct pre-mRNA splicing components and the cell nucleus. EMBO J. 1991, 10:3467-3481.
-
(1991)
EMBO J.
, vol.10
, pp. 3467-3481
-
-
Spector, D.L.1
Fu, X.D.2
Maniatis, T.3
-
18
-
-
0141867857
-
Challenging the dogma: the hidden layer of non-protein-coding RNAs in complex organisms
-
Mattick J.S. Challenging the dogma: the hidden layer of non-protein-coding RNAs in complex organisms. Bioessays 2003, 25:930-939.
-
(2003)
Bioessays
, vol.25
, pp. 930-939
-
-
Mattick, J.S.1
-
19
-
-
33846169089
-
Eukaryotic regulatory RNAs: an answer to the 'genome complexity' conundrum
-
Prasanth K.V., Spector D.L. Eukaryotic regulatory RNAs: an answer to the 'genome complexity' conundrum. Genes Dev. 2007, 21:11-42.
-
(2007)
Genes Dev.
, vol.21
, pp. 11-42
-
-
Prasanth, K.V.1
Spector, D.L.2
-
20
-
-
33751258576
-
Chromatin domains and the interchromatin compartment form structurally defined and functionally interacting nuclear networks
-
Albiez H., Cremer M., Tiberi C., Vecchio L., Schermelleh L., Dittrich S., Kupper K., Joffe B., Thormeyer T., von Hase J., Yang S., Rohr K., Leonhardt H., Solovei I., Cremer C., Fakan S., Cremer T. Chromatin domains and the interchromatin compartment form structurally defined and functionally interacting nuclear networks. Chrom. Res 2006, 14:707-733.
-
(2006)
Chrom. Res
, vol.14
, pp. 707-733
-
-
Albiez, H.1
Cremer, M.2
Tiberi, C.3
Vecchio, L.4
Schermelleh, L.5
Dittrich, S.6
Kupper, K.7
Joffe, B.8
Thormeyer, T.9
von Hase, J.10
Yang, S.11
Rohr, K.12
Leonhardt, H.13
Solovei, I.14
Cremer, C.15
Fakan, S.16
Cremer, T.17
-
21
-
-
34248566787
-
Comparison of nucleic acid targets prepared from total RNA or poly(A) RNA for DNA oligonucleotide microarray hybridization
-
Petersen K., Oyan A.M., Rostad K., Olsen S., Bo T.H., Salvesen H.B., Gjertsen B.T., Bruserud O., Halvorsen O.J., Akslen L.A., Steen V.M., Jonassen I., Kalland K.H. Comparison of nucleic acid targets prepared from total RNA or poly(A) RNA for DNA oligonucleotide microarray hybridization. Anal. Biochem. 2007, 366:46-58.
-
(2007)
Anal. Biochem.
, vol.366
, pp. 46-58
-
-
Petersen, K.1
Oyan, A.M.2
Rostad, K.3
Olsen, S.4
Bo, T.H.5
Salvesen, H.B.6
Gjertsen, B.T.7
Bruserud, O.8
Halvorsen, O.J.9
Akslen, L.A.10
Steen, V.M.11
Jonassen, I.12
Kalland, K.H.13
-
22
-
-
0036784576
-
Rev inhibition strongly affects intracellular distribution of human immunodeficiency virus type 1 RNAs
-
Cmarko D., Boe S.O., Scassellati C., Szilvay A.M., Davanger S., Fu X.D., Haukenes G., Kalland K.H., Fakan S. Rev inhibition strongly affects intracellular distribution of human immunodeficiency virus type 1 RNAs. J. Virol. 2002, 76:10473-10484.
-
(2002)
J. Virol.
, vol.76
, pp. 10473-10484
-
-
Cmarko, D.1
Boe, S.O.2
Scassellati, C.3
Szilvay, A.M.4
Davanger, S.5
Fu, X.D.6
Haukenes, G.7
Kalland, K.H.8
Fakan, S.9
-
23
-
-
60349107342
-
Visualisation of RNA by electron microscopic in situ hybridisation
-
Rouquette J., Kalland K.H., Fakan S. Visualisation of RNA by electron microscopic in situ hybridisation. Meth. Mol. Biol. 2009, 464:403-413.
-
(2009)
Meth. Mol. Biol.
, vol.464
, pp. 403-413
-
-
Rouquette, J.1
Kalland, K.H.2
Fakan, S.3
-
24
-
-
0015847493
-
Mise évidence de l'ADN et des polysaccharides à l'aide d'un nouveau réactif "de type Schiff"
-
Cogliati R., Gautier A. Mise évidence de l'ADN et des polysaccharides à l'aide d'un nouveau réactif "de type Schiff". C. R. Acad. Sci. Paris Ser. D 1973, 276:3041-3044.
-
(1973)
C. R. Acad. Sci. Paris Ser. D
, vol.276
, pp. 3041-3044
-
-
Cogliati, R.1
Gautier, A.2
-
25
-
-
0027133037
-
The study of the cell nucleus using cryofixation and cryosubstitution
-
von Schack M.L., Fakan S. The study of the cell nucleus using cryofixation and cryosubstitution. Micron 1993, 24:507-519.
-
(1993)
Micron
, vol.24
, pp. 507-519
-
-
von Schack, M.L.1
Fakan, S.2
-
26
-
-
0036349409
-
Spatial preservation of nuclear chromatin architecture during three- dimensional fluorescence in situ hybridization (3D-FISH)
-
Solovei I., Cavallo A., Schermelleh L., Jaunin F., Scasselati C., Cmarko D., Cremer C., Fakan S., Cremer T. Spatial preservation of nuclear chromatin architecture during three- dimensional fluorescence in situ hybridization (3D-FISH). Exp. Cell Res. 2002, 276:10-23.
-
(2002)
Exp. Cell Res.
, vol.276
, pp. 10-23
-
-
Solovei, I.1
Cavallo, A.2
Schermelleh, L.3
Jaunin, F.4
Scasselati, C.5
Cmarko, D.6
Cremer, C.7
Fakan, S.8
Cremer, T.9
-
27
-
-
0017111574
-
Effects of alpha-amanitine on chromatin in regenerating rat hepatocytes: a biochemical and morphologic study
-
Derenzini M., Marinozzi V., Novello F. Effects of alpha-amanitine on chromatin in regenerating rat hepatocytes: a biochemical and morphologic study. Virchows Arch. 1976, 20:307-318.
-
(1976)
Virchows Arch.
, vol.20
, pp. 307-318
-
-
Derenzini, M.1
Marinozzi, V.2
Novello, F.3
-
28
-
-
37249005861
-
Use of halogenated precursors for simultaneous DNA and RNA detection by means of immunoelectron and immunofluorescence microscopy
-
Vecchio L., Solimando L., Biggiogera M., Fakan S. Use of halogenated precursors for simultaneous DNA and RNA detection by means of immunoelectron and immunofluorescence microscopy. J. Histochem. Cytochem. 2008, 56:45-55.
-
(2008)
J. Histochem. Cytochem.
, vol.56
, pp. 45-55
-
-
Vecchio, L.1
Solimando, L.2
Biggiogera, M.3
Fakan, S.4
-
29
-
-
33646526019
-
Chromosome territories-a functional nuclear landscape
-
Cremer T., Cremer M., Dietzel S., Muller S., Solovei I., Fakan S. Chromosome territories-a functional nuclear landscape. Curr. Opin. Cell Biol. 2006, 18:307-316.
-
(2006)
Curr. Opin. Cell Biol.
, vol.18
, pp. 307-316
-
-
Cremer, T.1
Cremer, M.2
Dietzel, S.3
Muller, S.4
Solovei, I.5
Fakan, S.6
-
30
-
-
33646729244
-
Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations
-
Branco M.R., Pombo A. Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations. PLoS Biol. 2006, 4:e138.
-
(2006)
PLoS Biol.
, vol.4
-
-
Branco, M.R.1
Pombo, A.2
-
31
-
-
35648930913
-
The role of transcription factories in large-scale structure and dynamics of interphase chromatin
-
Sexton T., Umlauf D., Kurukuti S., Fraser P. The role of transcription factories in large-scale structure and dynamics of interphase chromatin. Semin. Cell Dev. Biol. 2007, 18:691-697.
-
(2007)
Semin. Cell Dev. Biol.
, vol.18
, pp. 691-697
-
-
Sexton, T.1
Umlauf, D.2
Kurukuti, S.3
Fraser, P.4
-
32
-
-
38149133051
-
Transcription factories are nuclear subcompartments that remain in the absence of transcription
-
Mitchell J.A., Fraser P. Transcription factories are nuclear subcompartments that remain in the absence of transcription. Genes Dev. 2008, 22:20-25.
-
(2008)
Genes Dev.
, vol.22
, pp. 20-25
-
-
Mitchell, J.A.1
Fraser, P.2
-
33
-
-
21044431735
-
Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution
-
Cheng J., Kapranov P., Drenkow J., Dike S., Brubaker S., Patel S., Long J., Stern D., Tammana H., Helt G., Sementchenko V., Piccolboni A., Bekiranov S., Bailey D.K., Ganesh M., Ghosh S., Bell I., Gerhard D.S., Gingeras T.R. Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. Science 2005, 308:1149-1154.
-
(2005)
Science
, vol.308
, pp. 1149-1154
-
-
Cheng, J.1
Kapranov, P.2
Drenkow, J.3
Dike, S.4
Brubaker, S.5
Patel, S.6
Long, J.7
Stern, D.8
Tammana, H.9
Helt, G.10
Sementchenko, V.11
Piccolboni, A.12
Bekiranov, S.13
Bailey, D.K.14
Ganesh, M.15
Ghosh, S.16
Bell, I.17
Gerhard, D.S.18
Gingeras, T.R.19
-
34
-
-
30044434769
-
Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome
-
Ravasi T., Suzuki H., Pang K.C., Katayama S., Furuno M., Okunishi R., Fukuda S., Ru K., Frith M.C., Gongora M.M., Grimmond S.M., Hume D.A., Hayashizaki Y., Mattick J.S. Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome. Genome Res. 2006, 16:11-19.
-
(2006)
Genome Res.
, vol.16
, pp. 11-19
-
-
Ravasi, T.1
Suzuki, H.2
Pang, K.C.3
Katayama, S.4
Furuno, M.5
Okunishi, R.6
Fukuda, S.7
Ru, K.8
Frith, M.C.9
Gongora, M.M.10
Grimmond, S.M.11
Hume, D.A.12
Hayashizaki, Y.13
Mattick, J.S.14
-
35
-
-
34147112685
-
Noncoding RNA transcription beyond annotated genes
-
Carninci P., Hayashizaki Y. Noncoding RNA transcription beyond annotated genes. Curr. Opin. Gen. Developm. 2007, 17:139-144.
-
(2007)
Curr. Opin. Gen. Developm.
, vol.17
, pp. 139-144
-
-
Carninci, P.1
Hayashizaki, Y.2
-
36
-
-
0018166569
-
Intranuclear migration of newly synthesized extranucleolar ribonucleoproteins. A high resolution quantitative autoradiographical and cytochemical study
-
Puvion E., Moyne G. Intranuclear migration of newly synthesized extranucleolar ribonucleoproteins. A high resolution quantitative autoradiographical and cytochemical study. Exp. Cell Res. 1978, 115:79-88.
-
(1978)
Exp. Cell Res.
, vol.115
, pp. 79-88
-
-
Puvion, E.1
Moyne, G.2
-
37
-
-
1842376906
-
The dynamics of a pre-mRNA splicing factor in living cells
-
Misteli T., Caceres J.F., Spector D.L. The dynamics of a pre-mRNA splicing factor in living cells. Nature 1997, 387:523-527.
-
(1997)
Nature
, vol.387
, pp. 523-527
-
-
Misteli, T.1
Caceres, J.F.2
Spector, D.L.3
-
38
-
-
0035912782
-
Assembly and transport of a premessenger RNP particle
-
Daneholt B. Assembly and transport of a premessenger RNP particle. Proc. Natl Acad. Sci. USA 2001, 98:7012-7017.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 7012-7017
-
-
Daneholt, B.1
-
39
-
-
0015117099
-
Comparative ultrastructural study of perichromatin- and Balbiai rin granules
-
Vazquez-Nin G., Bernhard W. Comparative ultrastructural study of perichromatin- and Balbiai rin granules. J. Ultrastruct. Res. 1971, 36:842-860.
-
(1971)
J. Ultrastruct. Res.
, vol.36
, pp. 842-860
-
-
Vazquez-Nin, G.1
Bernhard, W.2
-
40
-
-
0025139732
-
Isolation and initial characterization of a specific premessenger ribonucleoprotein particle
-
Wurtz T., Lonnroth A., Ovchinnikov L., Skoglund U., Daneholt B. Isolation and initial characterization of a specific premessenger ribonucleoprotein particle. Proc. Natl Acad. Sci. USA 1990, 87:831-835.
-
(1990)
Proc. Natl Acad. Sci. USA
, vol.87
, pp. 831-835
-
-
Wurtz, T.1
Lonnroth, A.2
Ovchinnikov, L.3
Skoglund, U.4
Daneholt, B.5
-
41
-
-
0031281996
-
Effects of hypophyseal hormones on transcription and RNA export to the cytoplasm
-
Vazquez Nin G.H., Echeverria O.M., Ortiz R., Ubaldo E., Fakan S. Effects of hypophyseal hormones on transcription and RNA export to the cytoplasm. Exp. Cell Res. 1997, 236:519-526.
-
(1997)
Exp. Cell Res.
, vol.236
, pp. 519-526
-
-
Vazquez Nin, G.H.1
Echeverria, O.M.2
Ortiz, R.3
Ubaldo, E.4
Fakan, S.5
-
42
-
-
28044451048
-
Mechanism of mRNA transport in the nucleus
-
Vargas D.Y., Raj A., Marras S.A.E., Kramer F.R., Tyagi S. Mechanism of mRNA transport in the nucleus. Proc. Natl Acad. Sci. USA 2005, 102:17008-17013.
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 17008-17013
-
-
Vargas, D.Y.1
Raj, A.2
Marras, S.A.E.3
Kramer, F.R.4
Tyagi, S.5
-
43
-
-
33644850343
-
Rapid, diffusional shuttling of Poly(A) RNA between nuclear speckles and the nucleoplasm
-
Ritland-Politz J.C., Tuft R.A., Prasanth K.V., Baudendistel N., Fogarty K.E., Lifshitz L.M., Langowski J., Spector D.L., Pederson T. Rapid, diffusional shuttling of Poly(A) RNA between nuclear speckles and the nucleoplasm. Mol. Biol. Cell 2006, 17:1239-1249.
-
(2006)
Mol. Biol. Cell
, vol.17
, pp. 1239-1249
-
-
Ritland-Politz, J.C.1
Tuft, R.A.2
Prasanth, K.V.3
Baudendistel, N.4
Fogarty, K.E.5
Lifshitz, L.M.6
Langowski, J.7
Spector, D.L.8
Pederson, T.9
-
44
-
-
34147151617
-
A reaction-diffusion model to study RNA motion by quantitative fluorescence recovery after photobleaching
-
Braga J., McNally J.G., CarmoFonseca M. A reaction-diffusion model to study RNA motion by quantitative fluorescence recovery after photobleaching. Biophys. J. 2007, 92:2694-2703.
-
(2007)
Biophys. J.
, vol.92
, pp. 2694-2703
-
-
Braga, J.1
McNally, J.G.2
CarmoFonseca, M.3
-
45
-
-
0037439634
-
Polycomb group gene silencing proteins are concentrated in the perichromatin compartment of the mammalian nucleus
-
Cmarko D., Verschure P.J., Otte A.R., van Driel R., Fakan S. Polycomb group gene silencing proteins are concentrated in the perichromatin compartment of the mammalian nucleus. J. Cell Sci. 2003, 116:335-343.
-
(2003)
J. Cell Sci.
, vol.116
, pp. 335-343
-
-
Cmarko, D.1
Verschure, P.J.2
Otte, A.R.3
van Driel, R.4
Fakan, S.5
|