Ramachandran redux

Proceedings of the National Academy of Sciences of the United States of America

Volumn 108, Issue 1, 2011, Pages 3-4

  Shi, Zhengshuang ^a   Kallenbach, Neville R ^b  

^a HUAZHONG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^b NEW YORK UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DIPEPTIDE;

ALPHA HELIX; BETA SHEET; CRYSTAL STRUCTURE; HYDROGEN BOND; MOLECULAR INTERACTION; NOTE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN STRUCTURE; STEREOSPECIFICITY;

AMIDES; HYDROGEN BONDING; MODELS, MOLECULAR; PROTEIN CONFORMATION; PROTEIN FOLDING;

EID: 78651113298     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1017021108     Document Type: Note

References (13)

1. Creighton TE (1993) Proteins, Structures and Molecular Properties (WH Freeman, New York).
2. Bernstein FC, et al. (1977) The Protein Data Bank: A computer-based archival file for macromolecular structures. J Mol Biol 112:535-542.
3. Ramachandran GN, Ramakrishnan C, Sasisekharan V (1963) Stereochemistry of polypeptide chain configurations. J Mol Biol 7:95-99.
4. Porter LL, Rose GD (2011) Redrawing the Ramachandran plot after inclusion of hydrogen-bonding constraints. Proc Natl Acad Sci USA 108:109-113.
5. Fleming PJ, Rose GD (2005) Do all backbone polar groups in proteins form hydrogen bonds? Protein Sci 14:1911-1917.
6. Perskie LL, Street TO, Rose GD (2008) Structures, basins, and energies: A deconstruction of the Protein Coil Library. Protein Sci 17:1151-1161.
7. Bartlett GJ, Choudhary A, Raines RT, Woolfson DN (2010) n→π* interactions in proteins. Nat Chem Biol 6:615-620.
8. Fufezan C (2010) The role of Buergi-Dunitz interactions in the structural stability of proteins. Proteins 78: 2831-2838.
9. Pophristic V, Goodman L (2001) Hyperconjugation not steric repulsion leads to the staggered structure of ethane. Nature 411:565-568.
10. Weinhold F (2001) Chemistry. A new twist on molecular shape. Nature 411:539-541.
11. Shi ZS, Chen K, Liu ZG, Kallenbach NR (2006) Conformation of the backbone in unfolded proteins. Chem Rev 106:1877-1897.
12. Avbelj F, Baldwin RL (2004) Origin of the neighboring residue effect on peptide backbone conformation. Proc Natl Acad Sci USA 101:10967-10972.
13. Shaw DE, et al. (2010) Atomic-level characterization of the structural dynamics of proteins. Science 330:341-346.