-
1
-
-
45049087254
-
Industrial carbohydrate biotransformations
-
Buchholz K, Seibel J. Industrial carbohydrate biotransformations. Carbohydr Res 2008; 343: 1966-1979.
-
(2008)
Carbohydr Res
, vol.343
, pp. 1966-1979
-
-
Buchholz, K.1
Seibel, J.2
-
2
-
-
0035831255
-
Relationship of sequence and structure to specificity in the alpha-amylase family of enzymes
-
MacGregor EA, Janecek S, Svensson B. Relationship of sequence and structure to specificity in the alpha-amylase family of enzymes. Biochim Biophys Acta 2001; 1546: 1-20.
-
(2001)
Biochim Biophys Acta
, vol.1546
, pp. 1-20
-
-
MacGregor, E.A.1
Janecek, S.2
Svensson, B.3
-
3
-
-
0034711947
-
Crystal structure of amylomaltase from Thermus aquaticus, a glycosyltransferase catalysing the production of large cyclic glucans
-
Przylas I, Tomoo K, Terada Y, Takaha T, Fujii K, Saenger W, Strater N. Crystal structure of amylomaltase from Thermus aquaticus, a glycosyltransferase catalysing the production of large cyclic glucans. J Mol Biol 2000; 296: 873-886.
-
(2000)
J Mol Biol
, vol.296
, pp. 873-886
-
-
Przylas, I.1
Tomoo, K.2
Terada, Y.3
Takaha, T.4
Fujii, K.5
Saenger, W.6
Strater, N.7
-
4
-
-
28844506194
-
The maltodextrin system of Escherichia coli: metabolism and transport
-
Dippel R, Boos W. The maltodextrin system of Escherichia coli: metabolism and transport. J Bacteriol 2005; 187: 8322-8331.
-
(2005)
J Bacteriol
, vol.187
, pp. 8322-8331
-
-
Dippel, R.1
Boos, W.2
-
5
-
-
0032810126
-
The functions of 4-α-glucanotransferases and their use for the production of cyclic glucans
-
Takaha T, Smith SM. The functions of 4-α-glucanotransferases and their use for the production of cyclic glucans. Biotechnol Genet Eng Rev 1999; 16: 257-280.
-
(1999)
Biotechnol Genet Eng Rev
, vol.16
, pp. 257-280
-
-
Takaha, T.1
Smith, S.M.2
-
6
-
-
0030062091
-
Potato D-enzyme catalyzes the cyclization of amylose to produce cycloamylose, a novel cyclic glucan
-
Takaha T, Yanase M, Takata H, Okada S, Smith SM. Potato D-enzyme catalyzes the cyclization of amylose to produce cycloamylose, a novel cyclic glucan. J Biol Chem 1996; 271: 2902-2908.
-
(1996)
J Biol Chem
, vol.271
, pp. 2902-2908
-
-
Takaha, T.1
Yanase, M.2
Takata, H.3
Okada, S.4
Smith, S.M.5
-
7
-
-
0032985721
-
Thermus aquaticus ATCC 33923 amylomaltase gene cloning and expression and enzyme characterization: production of cycloamylose
-
Terada Y, Fujii K, Takaha T, Okada S. Thermus aquaticus ATCC 33923 amylomaltase gene cloning and expression and enzyme characterization: production of cycloamylose. Appl Environ Microbiol 1999; 65: 910-915.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 910-915
-
-
Terada, Y.1
Fujii, K.2
Takaha, T.3
Okada, S.4
-
8
-
-
0033950563
-
The three transglycosylation reactions catalyzed by cyclodextrin glycosyltransferase from Bacillus circulans (strain 251) proceed via different kinetic mechanisms
-
van der Veen BA, van Alebeek GJ, Uitdehaag JC, Dijkstra BW, Dijkhuizen L. The three transglycosylation reactions catalyzed by cyclodextrin glycosyltransferase from Bacillus circulans (strain 251) proceed via different kinetic mechanisms. Eur J Biochem 2000; 267: 658-665.
-
(2000)
Eur J Biochem
, vol.267
, pp. 658-665
-
-
van der Veen, B.A.1
van Alebeek, G.J.2
Uitdehaag, J.C.3
Dijkstra, B.W.4
Dijkhuizen, L.5
-
9
-
-
0026055308
-
A classification of glycosyl hydrolases based on amino acid sequence similarities
-
Henrissat B. A classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem J 1991; 280(Pt 2): 309-316.
-
(1991)
Biochem J
, vol.280
, Issue.PART 2
, pp. 309-316
-
-
Henrissat, B.1
-
10
-
-
0029645404
-
Structures and mechanisms of glycosyl hydrolases
-
Davies G, Henrissat B. Structures and mechanisms of glycosyl hydrolases. Structure 1995; 3: 853-859.
-
(1995)
Structure
, vol.3
, pp. 853-859
-
-
Davies, G.1
Henrissat, B.2
-
11
-
-
44649096836
-
The unique glycoside hydrolase family 77 amylomaltase from Borrelia burgdorferi with only catalytic triad conserved
-
Godany A, Vidova B, Janecek S. The unique glycoside hydrolase family 77 amylomaltase from Borrelia burgdorferi with only catalytic triad conserved. FEMS Microbiol Lett 2008; 284: 84-91.
-
(2008)
FEMS Microbiol Lett
, vol.284
, pp. 84-91
-
-
Godany, A.1
Vidova, B.2
Janecek, S.3
-
12
-
-
25144432239
-
Amylomaltase of Pyrobaculum aerophilum IM2 produces thermoreversible starch gels
-
Kaper T, Talik B, Ettema TJ, Bos H, van der Maarel MJ, Dijkhuizen L. Amylomaltase of Pyrobaculum aerophilum IM2 produces thermoreversible starch gels. Appl Environ Microbiol 2005; 71: 5098-5106.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 5098-5106
-
-
Kaper, T.1
Talik, B.2
Ettema, T.J.3
Bos, H.4
van der Maarel, M.J.5
Dijkhuizen, L.6
-
13
-
-
0033694762
-
X-ray structure of acarbose bound to amylomaltase from Thermus aquaticus. Implications for the synthesis of large cyclic glucans
-
Przylas I, Terada Y, Fujii K, Takaha T, Saenger W, Strater N. X-ray structure of acarbose bound to amylomaltase from Thermus aquaticus. Implications for the synthesis of large cyclic glucans. Eur J Biochem 2000; 267: 6903-6913.
-
(2000)
Eur J Biochem
, vol.267
, pp. 6903-6913
-
-
Przylas, I.1
Terada, Y.2
Fujii, K.3
Takaha, T.4
Saenger, W.5
Strater, N.6
-
14
-
-
34247575657
-
Identification of acceptor substrate binding subsites +2 and +3 in the amylomaltase from Thermus thermophilus HB8
-
Kaper T, Leemhuis H, Uitdehaag JC, van der Veen BA, Dijkstra BW, van der Maarel MJ, Dijkhuizen L. Identification of acceptor substrate binding subsites +2 and +3 in the amylomaltase from Thermus thermophilus HB8. Biochemistry 2007; 46: 5261-5269.
-
(2007)
Biochemistry
, vol.46
, pp. 5261-5269
-
-
Kaper, T.1
Leemhuis, H.2
Uitdehaag, J.C.3
van der Veen, B.A.4
Dijkstra, B.W.5
van der Maarel, M.J.6
Dijkhuizen, L.7
-
15
-
-
0035976993
-
Hydrophobic amino acid residues in the acceptor binding site are main determinants for reaction mechanism and specificity of cyclodextrin-glycosyltransferase
-
van der Veen BA, Leemhuis H, Kralj S, Uitdehaag JC, Dijkstra BW, Dijkhuizen L. Hydrophobic amino acid residues in the acceptor binding site are main determinants for reaction mechanism and specificity of cyclodextrin-glycosyltransferase. J Biol Chem 2001; 276: 44557-44562.
-
(2001)
J Biol Chem
, vol.276
, pp. 44557-44562
-
-
van der Veen, B.A.1
Leemhuis, H.2
Kralj, S.3
Uitdehaag, J.C.4
Dijkstra, B.W.5
Dijkhuizen, L.6
-
16
-
-
34848871965
-
Conversion of a cyclodextrin glucanotransferase into an α-amylase: assessment of directed evolution strategies
-
Kelly RM, Leemhuis H, Dijkhuizen L. Conversion of a cyclodextrin glucanotransferase into an α-amylase: assessment of directed evolution strategies. Biochemistry 2007; 46: 11216-11222.
-
(2007)
Biochemistry
, vol.46
, pp. 11216-11222
-
-
Kelly, R.M.1
Leemhuis, H.2
Dijkhuizen, L.3
-
17
-
-
33845592355
-
Cloning and overexpression of 4-glucanotransferase from Thermus brockianus (TBGT) in E. coli
-
Bang BY, Kim HJ, Kim HY, Baik MY, Ahn SC, Kim CH, Park CS. Cloning and overexpression of 4-glucanotransferase from Thermus brockianus (TBGT) in E. coli. J Microbiol Biotechnol 2006; 16: 1809-1813.
-
(2006)
J Microbiol Biotechnol
, vol.16
, pp. 1809-1813
-
-
Bang, B.Y.1
Kim, H.J.2
Kim, H.Y.3
Baik, M.Y.4
Ahn, S.C.5
Kim, C.H.6
Park, C.S.7
-
18
-
-
34447132905
-
Three-way stabilization of the covalent intermediate in amylomaltase, an α-amylase-like transglycosylase
-
Barends TR, Bultema JB, Kaper T, van der Maarel MJ, Dijkhuizen L, Dijkstra BW. Three-way stabilization of the covalent intermediate in amylomaltase, an α-amylase-like transglycosylase. J Biol Chem 2007; 282: 17242-17249.
-
(2007)
J Biol Chem
, vol.282
, pp. 17242-17249
-
-
Barends, T.R.1
Bultema, J.B.2
Kaper, T.3
van der Maarel, M.J.4
Dijkhuizen, L.5
Dijkstra, B.W.6
-
19
-
-
33749619183
-
Contribution of W229 to the transglycosylation activity of 4-α-glucanotransferase from Pyrococcus furiosus
-
Tang SY, Yang SJ, Cha H, Woo EJ, Park C, Park KH. Contribution of W229 to the transglycosylation activity of 4-α-glucanotransferase from Pyrococcus furiosus. Biochim Biophys Acta 2006; 1764: 1633-1638.
-
(2006)
Biochim Biophys Acta
, vol.1764
, pp. 1633-1638
-
-
Tang, S.Y.1
Yang, S.J.2
Cha, H.3
Woo, E.J.4
Park, C.5
Park, K.H.6
-
20
-
-
34548495553
-
Changes in the catalytic properties of Pyrococcus furiosus thermostable amylase by mutagenesis of the substrate binding sites
-
Yang SJ, Min BC, Kim YW, Jang SM, Lee BH, Park KH. Changes in the catalytic properties of Pyrococcus furiosus thermostable amylase by mutagenesis of the substrate binding sites. Appl Environ Microbiol 2007; 73: 5607-5612.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5607-5612
-
-
Yang, S.J.1
Min, B.C.2
Kim, Y.W.3
Jang, S.M.4
Lee, B.H.5
Park, K.H.6
-
21
-
-
0034302052
-
Acceptor specificity of 4-α-glucanotransferase from Pyrococcus kodakaraensis KOD1, and synthesis of cycloamylose
-
Tachibana Y, Takaha T, Fujiwara S, Takagi M, Imanaka T. Acceptor specificity of 4-α-glucanotransferase from Pyrococcus kodakaraensis KOD1, and synthesis of cycloamylose. J Biosci Bioeng 2000; 90: 406-409.
-
(2000)
J Biosci Bioeng
, vol.90
, pp. 406-409
-
-
Tachibana, Y.1
Takaha, T.2
Fujiwara, S.3
Takagi, M.4
Imanaka, T.5
-
22
-
-
33947134880
-
Function of second glucan binding site including tyrosines 54 and 101 in Thermus aquaticus amylomaltase
-
Fujii K, Minagawa H, Terada Y, Takaha T, Kuriki T, Shimada J, Kaneko H. Function of second glucan binding site including tyrosines 54 and 101 in Thermus aquaticus amylomaltase. J Biosci Bioeng 2007; 103: 167-73.
-
(2007)
J Biosci Bioeng
, vol.103
, pp. 167-73
-
-
Fujii, K.1
Minagawa, H.2
Terada, Y.3
Takaha, T.4
Kuriki, T.5
Shimada, J.6
Kaneko, H.7
-
23
-
-
0036888353
-
Improvements in the analysis of domain motions in proteins from conformational change: DynDom version 1.50
-
Hayward S, Lee RA. Improvements in the analysis of domain motions in proteins from conformational change: DynDom version 1.50. J Mol Graph Model 2002; 21: 181-183.
-
(2002)
J Mol Graph Model
, vol.21
, pp. 181-183
-
-
Hayward, S.1
Lee, R.A.2
-
24
-
-
0035874109
-
Enzymatic circularization of a malto-octaose linear chain studied by stochastic reaction path calculations on cyclodextrin glycosyltransferase
-
Uitdehaag JC, van der Veen BA, Dijkhuizen L, Elber R, Dijkstra BW. Enzymatic circularization of a malto-octaose linear chain studied by stochastic reaction path calculations on cyclodextrin glycosyltransferase. Proteins 2001; 43: 327-335.
-
(2001)
Proteins
, vol.43
, pp. 327-335
-
-
Uitdehaag, J.C.1
van der Veen, B.A.2
Dijkhuizen, L.3
Elber, R.4
Dijkstra, B.W.5
-
25
-
-
0031059866
-
Processing of x-ray diffraction data collected in oscillation mode
-
Otwinowski Z, Minor W. Processing of x-ray diffraction data collected in oscillation mode. Methods Enzymol 1997; 276: 306-326.
-
(1997)
Methods Enzymol
, vol.276
, pp. 306-326
-
-
Otwinowski, Z.1
Minor, W.2
-
26
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project, Number 4.
-
Collaborative Computational Project, Number 4. The CCP4 suite: Programs for protein crystallography. Acta Crystallogr Sect D Biol Crystallogr 1994; 50: 760-763.
-
(1994)
Acta Crystallogr Sect D Biol Crystallogr
, vol.50
, pp. 760-763
-
-
-
27
-
-
3543012707
-
Crystallography and NMR system: a new software suite for macromolecular structure determination
-
Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, Grosse-Kunstleve RW, Jiang JS, Kuszewski J, Nilges M, Pannu NS, Read RJ, Rice LM, Simonson T, Warren GL. Crystallography and NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr D Biol Crystallogr 1998; 54: 905-921.
-
(1998)
Acta Crystallogr D Biol Crystallogr
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
29
-
-
0027169515
-
Main-chain bond lengths and bond angles in protein structures
-
Laskowski RA, Moss DS, Thornton JM. Main-chain bond lengths and bond angles in protein structures. J Mol Biol 1993; 231: 1049-1067.
-
(1993)
J Mol Biol
, vol.231
, pp. 1049-1067
-
-
Laskowski, R.A.1
Moss, D.S.2
Thornton, J.M.3
-
30
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994; 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
31
-
-
0036469060
-
Unraveling hot spots in binding interfaces: progress and challenges
-
DeLano WL. Unraveling hot spots in binding interfaces: progress and challenges. Curr Opin Struct Biol 2002; 12: 14-20.
-
(2002)
Curr Opin Struct Biol
, vol.12
, pp. 14-20
-
-
DeLano, W.L.1
|