-
1
-
-
0026784986
-
Two novel heat shock genes encoding proteins produced in response to heterologous protein expression in Escherichia coli
-
Allen, S. P., Polazzi, J. O., Gierse, J. K. & Easton, A. M. (1992). Two novel heat shock genes encoding proteins produced in response to heterologous protein expression in Escherichia coli. J Bacteriol 174, 6938-6947.
-
(1992)
J Bacteriol
, vol.174
, pp. 6938-6947
-
-
Allen, S.P.1
Polazzi, J.O.2
Gierse, J.K.3
Easton, A.M.4
-
2
-
-
77949346874
-
The IbpA and IbpB small heat-shock proteins are substrates of the AAA+ Lon protease
-
Bissonnette, S. A., Rivera-Rivera, I., Sauer, R. T. & Baker, T. A. (2010). The IbpA and IbpB small heat-shock proteins are substrates of the AAA+ Lon protease. Mol Microbiol 75, 1539-1549.
-
(2010)
Mol Microbiol
, vol.75
, pp. 1539-1549
-
-
Bissonnette, S.A.1
Rivera-Rivera, I.2
Sauer, R.T.3
Baker, T.A.4
-
3
-
-
0027932830
-
Antisense RNA-mediated transcriptional attenuation occurs faster than stable antisense/target RNA pairing: An in vitro study of plasmid pIP501
-
Brantl, S. & Wagner, E. G. (1994). Antisense RNA-mediated transcriptional attenuation occurs faster than stable antisense/target RNA pairing: an in vitro study of plasmid pIP501. EMBO J 13, 3599-3607.
-
(1994)
EMBO J
, vol.13
, pp. 3599-3607
-
-
Brantl, S.1
Wagner, E.G.2
-
4
-
-
13444283630
-
Interaction network containing conserved and essential protein complexes in Escherichia coli
-
Butland, G., Peregrin-Alvarez, J. M., Li, J., Yang, W., Yang, X., Canadien, V., Starostine, A., Richards, D. & other authors (2005). Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433, 531-537.
-
(2005)
Nature
, vol.433
, pp. 531-537
-
-
Butland, G.1
Peregrin-Alvarez, J.M.2
Li, J.3
Yang, W.4
Yang, X.5
Canadien, V.6
Starostine, A.7
Richards, D.8
-
5
-
-
42049122814
-
Regulation of bacterial RNA polymerase s factor activity: A structural perspective
-
Campbell, E. A., Westblade, L. F. & Darst, S. A. (2008). Regulation of bacterial RNA polymerase s factor activity: a structural perspective. Curr Opin Microbiol 11, 121-127.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 121-127
-
-
Campbell, E.A.1
Westblade, L.F.2
Darst, S.A.3
-
6
-
-
35548995356
-
The RNA degradosome of Escherichia coli: An mRNA-degrading machine assembled on RNase e
-
Carpousis, A. J. (2007). The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E. Annu Rev Microbiol 61, 71-87.
-
(2007)
Annu Rev Microbiol
, vol.61
, pp. 71-87
-
-
Carpousis, A.J.1
-
7
-
-
0027445907
-
Sequence analysis of four new heat-shock genes constituting the hslTS/ibpAB and hslVU operons in Escherichia coli
-
Chuang, S. E., Burland, V., Plunkett, G., III, Daniels, D. L. & Blattner, F. R. (1993). Sequence analysis of four new heat-shock genes constituting the hslTS/ibpAB and hslVU operons in Escherichia coli. Gene 134, 1-6.
-
(1993)
Gene
, vol.134
, pp. 1-6
-
-
Chuang, S.E.1
Burland, V.2
Plunkett, G.3
Iii Daniels, D.L.4
Blattner, F.R.5
-
8
-
-
0026559344
-
Specificity of Escherichia coli endoribonuclease RNase E: In vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site
-
Ehretsmann, C. P., Carpousis, A. J. & Krisch, H. M. (1992). Specificity of Escherichia coli endoribonuclease RNase E: in vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site. Genes Dev 6, 149-159.
-
(1992)
Genes Dev
, vol.6
, pp. 149-159
-
-
Ehretsmann, C.P.1
Carpousis, A.J.2
Krisch, H.M.3
-
9
-
-
0019476056
-
Inactivation of the ribonucleic acid-processing enzyme ribonuclease e blocks cell division
-
Goldblum, K. & Apririon, D. (1981). Inactivation of the ribonucleic acid-processing enzyme ribonuclease E blocks cell division. J Bacteriol 146, 128-132.
-
(1981)
J Bacteriol
, vol.146
, pp. 128-132
-
-
Goldblum, K.1
Apririon, D.2
-
10
-
-
0032459427
-
The functional and regulatory roles of sigma factors in transcription
-
Gross, C. A., Chan, C., Dombroski, A., Gruber, T., Sharp, M., Tupy, J. & Young, B. (1998). The functional and regulatory roles of sigma factors in transcription. Cold Spring Harb Symp Quant Biol 63, 141-155.
-
(1998)
Cold Spring Harb Symp Quant Biol
, vol.63
, pp. 141-155
-
-
Gross, C.A.1
Chan, C.2
Dombroski, A.3
Gruber, T.4
Sharp, M.5
Tupy, J.6
Young, B.7
-
11
-
-
51949087754
-
Convergence of molecular, modeling, and systems approaches for an understanding of the Escherichia coli heat shock response
-
Guisbert, E., Yura, T., Rhodius, V. A. & Gross, C. A. (2008). Convergence of molecular, modeling, and systems approaches for an understanding of the Escherichia coli heat shock response. Microbiol Mol Biol Rev 72, 545-554.
-
(2008)
Microbiol Mol Biol Rev
, vol.72
, pp. 545-554
-
-
Guisbert, E.1
Yura, T.2
Rhodius, V.A.3
Gross, C.A.4
-
12
-
-
8844219685
-
Roles and applications of small heat shock proteins in the production of recombinant proteins in Escherichia coli
-
Han, M. J., Park, S. J., Park, T. J. & Lee, S. Y. (2004). Roles and applications of small heat shock proteins in the production of recombinant proteins in Escherichia coli. Biotechnol Bioeng 88, 426-436.
-
(2004)
Biotechnol Bioeng
, vol.88
, pp. 426-436
-
-
Han, M.J.1
Park, S.J.2
Park, T.J.3
Lee, S.Y.4
-
13
-
-
0024252185
-
Extension inhibition analysis of translation initiation complexes
-
Hartz, D., McPheeters, D. S., Traut, R. & Gold, L. (1988). Extension inhibition analysis of translation initiation complexes. Methods Enzymol 164, 419-425.
-
(1988)
Methods Enzymol
, vol.164
, pp. 419-425
-
-
Hartz, D.1
McPheeters, D.S.2
Traut, R.3
Gold, L.4
-
14
-
-
0036714331
-
Signal transduction and regulatory mechanisms involved in control of the sS (RpoS) subunit of RNA polymerase
-
Hengge-Aronis, R. (2002). Signal transduction and regulatory mechanisms involved in control of the sS (RpoS) subunit of RNA polymerase. Microbiol Mol Biol Rev 66, 373-395.
-
(2002)
Microbiol Mol Biol Rev
, vol.66
, pp. 373-395
-
-
Hengge-Aronis, R.1
-
15
-
-
0036921485
-
Degradation of mRNA in Escherichia coli
-
Jain, C. (2002). Degradation of mRNA in Escherichia coli. IUBMB Life 54, 315-321.
-
(2002)
IUBMB Life
, vol.54
, pp. 315-321
-
-
Jain, C.1
-
16
-
-
0034653760
-
Small heat shock proteins, IbpA and IbpB, are involved in resistances to heat and superoxide stresses in Escherichia coli
-
Kitagawa, M., Matsumura, Y. & Tsuchido, T. (2000). Small heat shock proteins, IbpA and IbpB, are involved in resistances to heat and superoxide stresses in Escherichia coli. FEMS Microbiol Lett 184, 165-171.
-
(2000)
FEMS Microbiol Lett
, vol.184
, pp. 165-171
-
-
Kitagawa, M.1
Matsumura, Y.2
Tsuchido, T.3
-
17
-
-
0036315595
-
Escherichia coli small heat shock proteins, IbpA and IbpB, protect enzymes from inactivation by heat and oxidants
-
Kitagawa, M., Miyakawa, M., Matsumura, Y. & Tsuchido, T. (2002). Escherichia coli small heat shock proteins, IbpA and IbpB, protect enzymes from inactivation by heat and oxidants. Eur J Biochem 269, 2907-2917.
-
(2002)
Eur J Biochem
, vol.269
, pp. 2907-2917
-
-
Kitagawa, M.1
Miyakawa, M.2
Matsumura, Y.3
Tsuchido, T.4
-
19
-
-
0034804837
-
Transcription of the ibpB heat-shock gene is under control of σ32-and s54-promoters, a third regulon of heat-shock response
-
Kuczyńska-Wisńik, D., Laskowska, E. & Taylor, A. (2001). Transcription of the ibpB heat-shock gene is under control of σ32-and s54-promoters, a third regulon of heat-shock response. Biochem Biophys Res Commun 284, 57-64.
-
(2001)
Biochem Biophys Res Commun
, vol.284
, pp. 57-64
-
-
Kuczyńska-Wisńik, D.1
Laskowska, E.2
Taylor, A.3
-
20
-
-
0039870135
-
IbpA and IbpB, the new heat-shock proteins, bind to endogenous Escherichia coli proteins aggregated intracellularly by heat shock
-
Laskowska, E., Wawrzynow, A. & Taylor, A. (1996). IbpA and IbpB, the new heat-shock proteins, bind to endogenous Escherichia coli proteins aggregated intracellularly by heat shock. Biochimie 78, 117-122.
-
(1996)
Biochimie
, vol.78
, pp. 117-122
-
-
Laskowska, E.1
Wawrzynow, A.2
Taylor, A.3
-
21
-
-
23244464653
-
The small heatshock proteins IbpA and IbpB reduce the stress load of recombinant Escherichia coli and delay degradation of inclusion bodies
-
Lethanh, H., Neubauer, P. & Hoffmann, F. (2005). The small heatshock proteins IbpA and IbpB reduce the stress load of recombinant Escherichia coli and delay degradation of inclusion bodies. Microb Cell Fact 4, 6.
-
(2005)
Microb Cell Fact
, vol.4
, pp. 6
-
-
Lethanh, H.1
Neubauer, P.2
Hoffmann, F.3
-
22
-
-
0025981908
-
Gene 32 transcription and mRNA processing in T4-related bacteriophages
-
Loayza, D., Carpousis, A. J. & Krisch, H. M. (1991). Gene 32 transcription and mRNA processing in T4-related bacteriophages. Mol Microbiol 5, 715-725.
-
(1991)
Mol Microbiol
, vol.5
, pp. 715-725
-
-
Loayza, D.1
Carpousis, A.J.2
Krisch, H.M.3
-
23
-
-
16844368450
-
The small heat shock protein IbpA of Escherichia coli cooperates with IbpB in stabilization of thermally aggregated proteins in a disaggregation competent state
-
Matuszewska, M., Kuczyńska-Wisńik, D., Laskowska, E. & Liberek, K. (2005). The small heat shock protein IbpA of Escherichia coli cooperates with IbpB in stabilization of thermally aggregated proteins in a disaggregation competent state. J Biol Chem 280, 12292-12298.
-
(2005)
J Biol Chem
, vol.280
, pp. 12292-12298
-
-
Matuszewska, M.1
Kuczyńska-Wisńik, D.2
Laskowska, E.3
Liberek, K.4
-
24
-
-
48449102208
-
Escherichia coli heat-shock proteins IbpA/B are involved in resistance to oxidative stress induced by copper
-
Matuszewska, E., Kwiatkowska, J., Kuczyńska-Wisńik, D. & Laskowska, E. (2008). Escherichia coli heat-shock proteins IbpA/B are involved in resistance to oxidative stress induced by copper. Microbiology 154, 1739-1747.
-
(2008)
Microbiology
, vol.154
, pp. 1739-1747
-
-
Matuszewska, E.1
Kwiatkowska, J.2
Kuczyńska-Wisńik, D.3
Laskowska, E.4
-
25
-
-
0003785155
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
-
Miller, J. H. (1972). Experiments in Molecular Genetics. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
26
-
-
85011941305
-
Translational control of bacterial heat shock and virulence genes by temperature-sensing mRNAs
-
Narberhaus, F. (2010). Translational control of bacterial heat shock and virulence genes by temperature-sensing mRNAs. RNA Biol 7, 84-89.
-
(2010)
RNA Biol
, vol.7
, pp. 84-89
-
-
Narberhaus, F.1
-
27
-
-
70349906229
-
Regulatory RNAs in prokaryotes: Here, there and everywhere
-
Narberhaus, F. & Vogel, J. (2009). Regulatory RNAs in prokaryotes: here, there and everywhere. Mol Microbiol 74, 261-269.
-
(2009)
Mol Microbiol
, vol.74
, pp. 261-269
-
-
Narberhaus, F.1
Vogel, J.2
-
28
-
-
33644884747
-
RNA thermometers
-
Narberhaus, F., Waldminghaus, T. & Chowdhury, S. (2006). RNA thermometers. FEMS Microbiol Rev 30, 3-16.
-
(2006)
FEMS Microbiol Rev
, vol.30
, pp. 3-16
-
-
Narberhaus, F.1
Waldminghaus, T.2
Chowdhury, S.3
-
29
-
-
0023663908
-
Differential mRNA stability controls relative gene expression within a polycistronic operon
-
Newbury, S. F., Smith, N. H. & Higgins, C. F. (1987). Differential mRNA stability controls relative gene expression within a polycistronic operon. Cell 51, 1131-1143.
-
(1987)
Cell
, vol.51
, pp. 1131-1143
-
-
Newbury, S.F.1
Smith, N.H.2
Higgins, C.F.3
-
30
-
-
33745618956
-
Regulon and promoter analysis of the E. coli heat-shock factor, s32, reveals a multifaceted cellular response to heat stress
-
Nonaka, G., Blankschien, M., Herman, C., Gross, C. A. & Rhodius, V. A. (2006). Regulon and promoter analysis of the E. coli heat-shock factor, s32, reveals a multifaceted cellular response to heat stress. Genes Dev 20, 1776-1789.
-
(2006)
Genes Dev
, vol.20
, pp. 1776-1789
-
-
Nonaka, G.1
Blankschien, M.2
Herman, C.3
Gross, C.A.4
Rhodius, V.A.5
-
31
-
-
0021073779
-
Construction of improved M13-vectors using oligodeoxynucleotide-directed mutagenesis
-
Norrander, J., Kempe, T. & Messing, J. (1983). Construction of improved M13-vectors using oligodeoxynucleotide-directed mutagenesis. Gene 26, 101-106.
-
(1983)
Gene
, vol.26
, pp. 101-106
-
-
Norrander, J.1
Kempe, T.2
Messing, J.3
-
32
-
-
0024639409
-
Cytoplasmic heat shock granules are formed from precursor particles and are associated with a specific set of mRNAs
-
Nover, L., Scharf, K. D. & Neumann, D. (1989). Cytoplasmic heat shock granules are formed from precursor particles and are associated with a specific set of mRNAs. Mol Cell Biol 9, 1298-1308.
-
(1989)
Mol Cell Biol
, vol.9
, pp. 1298-1308
-
-
Nover, L.1
Scharf, K.D.2
Neumann, D.3
-
33
-
-
0023629563
-
New and versatile cloning vectors with kanamycin-resistance marker
-
Pridmore, R. D. (1987). New and versatile cloning vectors with kanamycin-resistance marker. Gene 56, 309-312.
-
(1987)
Gene
, vol.56
, pp. 309-312
-
-
Pridmore, R.D.1
-
34
-
-
65249187165
-
YbeY, a heat shock protein involved in translation in Escherichia coli
-
Rasouly, A., Schonbrun, M., Shenhar, Y. & Ron, E. Z. (2009). YbeY, a heat shock protein involved in translation in Escherichia coli. J Bacteriol 191, 2649-2655.
-
(2009)
J Bacteriol
, vol.191
, pp. 2649-2655
-
-
Rasouly, A.1
Schonbrun, M.2
Shenhar, Y.3
Ron, E.Z.4
-
35
-
-
58549098512
-
Distinct activities of Escherichia coli small heat shock proteins IbpA and IbpB promote efficient protein disaggregation
-
Ratajczak, E., Zietkiewicz, S. & Liberek, K. (2009). Distinct activities of Escherichia coli small heat shock proteins IbpA and IbpB promote efficient protein disaggregation. J Mol Biol 386, 178-189.
-
(2009)
J Mol Biol
, vol.386
, pp. 178-189
-
-
Ratajczak, E.1
Zietkiewicz, S.2
Liberek, K.3
-
36
-
-
0032939521
-
MRNA degradation in bacteria
-
Rauhut, R. & Klug, G. (1999). mRNA degradation in bacteria. FEMS Microbiol Rev 23, 353-370.
-
(1999)
FEMS Microbiol Rev
, vol.23
, pp. 353-370
-
-
Rauhut, R.1
Klug, G.2
-
37
-
-
0033214149
-
Genome-wide expression profiling in Escherichia coli K-12
-
Richmond, C. S., Glasner, J. D., Mau, R., Jin, H. & Blattner, F. R. (1999). Genome-wide expression profiling in Escherichia coli K-12.Nucleic Acids Res 27, 3821-3835.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 3821-3835
-
-
Richmond, C.S.1
Glasner, J.D.2
Mau, R.3
Jin, H.4
Blattner, F.R.5
-
38
-
-
0004136246
-
-
2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
-
Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
39
-
-
60549112198
-
Temperature sensors of eubacteria
-
Schumann, W. (2009). Temperature sensors of eubacteria. Adv Appl Microbiol 67, 213-256.
-
(2009)
Adv Appl Microbiol
, vol.67
, pp. 213-256
-
-
Schumann, W.1
-
40
-
-
0033537845
-
Biochemical characterization of the small heat shock protein IbpB from Escherichia coli
-
Shearstone, J. R. & Baneyx, F. (1999). Biochemical characterization of the small heat shock protein IbpB from Escherichia coli. J Biol Chem 274, 9937-9945.
-
(1999)
J Biol Chem
, vol.274
, pp. 9937-9945
-
-
Shearstone, J.R.1
Baneyx, F.2
-
41
-
-
0032077184
-
Interaction of DNA with bovine lens alpha-crystallin: Its functional implications
-
Singh, K., Groth-Vasselli, B. & Farnsworth, P. N. (1998). Interaction of DNA with bovine lens alpha-crystallin: its functional implications. Int J Biol Macromol 22, 315-320.
-
(1998)
Int J Biol Macromol
, vol.22
, pp. 315-320
-
-
Singh, K.1
Groth-Vasselli, B.2
Farnsworth, P.N.3
-
42
-
-
0016731333
-
Genetic mapping of a mutation that causes ribonucleases III deficiency in Escherichia coli
-
Studier, F. W. (1975). Genetic mapping of a mutation that causes ribonucleases III deficiency in Escherichia coli. J Bacteriol 124, 307-316.
-
(1975)
J Bacteriol
, vol.124
, pp. 307-316
-
-
Studier, F.W.1
-
44
-
-
0032079487
-
The small heat-shock protein IbpB from Escherichia coli stabilizes stressdenatured proteins for subsequent refolding by a multichaperone network
-
Veinger, L., Diamant, S., Buchner, J. & Goloubinoff, P. (1998). The small heat-shock protein IbpB from Escherichia coli stabilizes stressdenatured proteins for subsequent refolding by a multichaperone network. J Biol Chem 273, 11032-11037.
-
(1998)
J Biol Chem
, vol.273
, pp. 11032-11037
-
-
Veinger, L.1
Diamant, S.2
Buchner, J.3
Goloubinoff, P.4
-
45
-
-
33748350078
-
Extensive functional overlap between sigma factors in Escherichia coli
-
Wade, J. T., Roa, D. C., Grainger, D. C., Hurd, D., Busby, S. J., Struhl, K. & Nudler, E. (2006). Extensive functional overlap between sigma factors in Escherichia coli. Nat Struct Mol Biol 13, 806-814.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 806-814
-
-
Wade, J.T.1
Roa, D.C.2
Grainger, D.C.3
Hurd, D.4
Busby, S.J.5
Struhl, K.6
Nudler, E.7
-
46
-
-
29044440899
-
RNA thermometers are common in a- and c-proteobacteria
-
Waldminghaus, T., Fippinger, A., Alfsmann, J. & Narberhaus, F. (2005). RNA thermometers are common in a- and c-proteobacteria. Biol Chem 386, 1279-1286.
-
(2005)
Biol Chem
, vol.386
, pp. 1279-1286
-
-
Waldminghaus, T.1
Fippinger, A.2
Alfsmann, J.3
Narberhaus, F.4
-
47
-
-
35248843565
-
Genomewide bioinformatic prediction and experimental evaluation of potential RNA thermometers
-
Waldminghaus, T., Gaubig, L. C. & Narberhaus, F. (2007). Genomewide bioinformatic prediction and experimental evaluation of potential RNA thermometers. Mol Genet Genomics 278, 555-564.
-
(2007)
Mol Genet Genomics
, vol.278
, pp. 555-564
-
-
Waldminghaus, T.1
Gaubig, L.C.2
Narberhaus, F.3
-
48
-
-
85046914523
-
The Escherichia coli ibpA thermometer is comprised of stable and unstable structural elements
-
Waldminghaus, T., Gaubig, L. C., Klinkert, B. & Narberhaus, F. (2009). The Escherichia coli ibpA thermometer is comprised of stable and unstable structural elements. RNA Biol 6, 455-463.
-
(2009)
RNA Biol
, vol.6
, pp. 455-463
-
-
Waldminghaus, T.1
Gaubig, L.C.2
Klinkert, B.3
Narberhaus, F.4
-
49
-
-
60149089144
-
Regulatory RNAs in bacteria
-
Waters, L. S. & Storz, G. (2009). Regulatory RNAs in bacteria. Cell 136, 615-628.
-
(2009)
Cell
, vol.136
, pp. 615-628
-
-
Waters, L.S.1
Storz, G.2
-
50
-
-
17144365857
-
Experimental RNomics in Aquifex aeolicus: Identification of small non-coding RNAs and the putative 6S RNA homolog
-
Willkomm, D. K., Minnerup, J., Huttenhofer, A. & Hartmann, R. K. (2005). Experimental RNomics in Aquifex aeolicus: identification of small non-coding RNAs and the putative 6S RNA homolog. Nucleic Acids Res 33, 1949-1960.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 1949-1960
-
-
Willkomm, D.K.1
Minnerup, J.2
Huttenhofer, A.3
Hartmann, R.K.4
-
51
-
-
27144527479
-
Regulation of bacterial gene expression by riboswitches
-
Winkler, W. C. & Breaker, R. R. (2005). Regulation of bacterial gene expression by riboswitches. Annu Rev Microbiol 59, 487-517.
-
(2005)
Annu Rev Microbiol
, vol.59
, pp. 487-517
-
-
Winkler, W.C.1
Breaker, R.R.2
-
52
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker, M. (2003). Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31, 3406-3415.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|