Evaluation of copper-induced stress on eggplant (Solanum melongena L.) seedlings at the molecular and population levels by use of various biomarkers

Mutation Research - Genetic Toxicology and Environmental Mutagenesis

Volumn 719, Issue 1-2, 2011, Pages 29-34

  Körpe, Didem Aksoy ^a   Aras, Sümer ^a  

^a ANKARA UNIVERSITY   (Turkey)

Author keywords

Eggplant; Genomic template stability; Heavy metal; RAPD

Indexed keywords

BIOLOGICAL MARKER; COPPER; VEGETABLE PROTEIN;

ARTICLE; AUBERGINE; DRY WEIGHT; ECOTOXICOLOGY; GENE AMPLIFICATION; NONHUMAN; PLANT STRESS; PRIORITY JOURNAL; RANDOM AMPLIFICATION OF POLYMORPHIC DNA; ROOT GROWTH; SEEDLING;

BIOLOGICAL MARKERS; BIOMASS; COPPER; DOSE-RESPONSE RELATIONSHIP, DRUG; PLANT PROTEINS; PLANT ROOTS; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; SEEDLING; SOIL POLLUTANTS; SOLANUM MELONGENA; TIME FACTORS;

SOLANUM MELONGENA;

EID: 78650562311     PISSN: 13835718     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mrgentox.2010.10.003     Document Type: Article

References (64)

1. Muccifora S. Effects of copper on spore germination, growth and ultrastructure of Polypodium cambricum L. Gametophytes. Environ. Pollut. 2007, 153:369-375.
2. Costa G., Michaut J.C., Morel J.L. Influence of cadmium on water relations and gas exchanges in phosphorus deficient Lupinus alba. Plant Physiol. Biochem. 1994, 32:105.
3. Nussbaum S., Shemutz D., Brunold C. Regulation of assimilatory sulfate reduction by cadmium Zea mays L. Plant Physiol. 1988, 88:1407.
4. Marschner H. Mineral Nutrition of Higher Plants 1995, Academic Press, London.
5. 2-evolving organisms. Photosynth. Res. 1999, 60:111-149.
6. Ralph P.J., Burchett M.D. Photosynthetic response of Halophila ovalis to heavy metal stress. Environ. Pollut. 1998, 103:91-101.
7. Mediouni C., Benzarti O., Tray B., Mohamed H.G., Jemal F. Cadmium and copper toxicity for tomato seedlings. Agron. Sustain. Dev. 2006, 26:227-232.
8. De Vos C.H.R., Ten Boukum W.M., Vooijs R., Schat H., De Kok L.J. Effect of copper on fatty acid composition and peroxidation of lipids in the roots of copper-tolerant and sensitive Silene cucubalus. Plant Physiol. Biochem. 1993, 31:151-158.
9. Girotti A.W. Photosensitized oxidation of membrane lipids: reaction pathways, cytotoxic effects, and cytoprotective mechanisms. J. Photochem. Photobiol. B: Biol. 2001, 63:103-113.
10. Doncheva S., Nikolov B., Ogneva V. Effect of excess copper on the morphology of the nucleus in maize root meristem cells. Physiol. Plantarum 1996, 96:118-122.
11. Imlay J.A., Linn S. DNA damage and oxygen radical toxicity. Science 1986, 240:1302-1309.
12. Conte C., Mutti I., Puglisi P., Ferrarini A., Regina G.R.G., Maestri E., Marmiroli N. DNA fingerprinting analysis by a PCR based method for monitoring the genotoxic effects of heavy metals pollution. Chemosphere 1998, 37:2739-2749.
13. Mengoni A., Gonnelli C., Galardi F., Gabbrielli R., Bazzicalupo M. Genetic diversity and heavy metal tolerance in populations of Silene paradoxa L. (Caryophyllaceae): a random amplified polymorphic DNA analysis. Mol. Ecol. 2000, 9:1319-1324.
14. Atienzar F.A., Cordi B., Donkin M.E., Evenden A.J., Jha A.N., Depledge M.H. Comparison of ultraviolet-induced genotoxicity detected by random amplified polymorphic DNA with chlorophyll florescence and growth in a marine macroalgae, Palmaria palmata. Aquat. Toxicol. 2000, 50:1-12.
15. Atienzar F.A., Cheung V.V., Jha A.N., Depledge M.H. Fitness parameters and DNA effects are sensitive indicators of copper-induced toxicity in Daphnia magna. Toxicol. Sci. 2001, 59:241-250.
16. Liu W., Li P., Qi X.M., Zhou Q., Zheng L., Sun T., Yang Y. DNA changes in barley (Hordeum vulgare) seedlings induced by cadmium pollution using RAPD analysis. Chemosphere 2005, 61:158-167.
17. Liu W., Yang Y., Zhou Q., Xie L., Li P., Sun T. Impact assessment of cadmium contamination on rice (Oryza sativa L.) seedlings at molecular and population levels using multiple biomarkers. Chemosphere 2007, 67:1155-1163.
18. Liu W., Yang Y., Li P., Zhou Q., Xie L., Han Y. Risk assessment of cadmium-contaminated soil on plant DNA damage using RAPD and physiological indices. J. Hazard. Mater. 2009, 161:878-883.
19. Gupta M., Sarin N.B. Heavy metal induced DNA changes in DNA analysis and identification of sequence characterized amplified region marker. J. Environ. Sci. 2009, 21:686-690.
20. Muller L.A.H., Lambaerts M., Vangronsueld J., Colpaert J.V. AFLP-based assessment of the effects of environmental heavy metal pollution on the genetic structure of Pioneer populations of Suillus luteus. New Phytol. 2004, 164:297-303.
21. Morton R.A. Evolution of Drosophila insecticide resistance. Genome 1993, 36:1-7.
22. Belfiore N.M., Anderson S.L. Effects of contaminants on genetic patterns in aquatic organisms: a review. Mutat. Res. 2001, 489:97-122.
23. Becerril C., Acevedo H., Ferrero M., Sanz F., Castano A. DNA fingerprint comparison of rainbow trout and RTG-2 cell line using random amplified polymorphic DNA. Ecotoxicology 2001, 10:115-124.
24. Theodorakis C.W., Bickham J.W., Lamb T. Integration of genotoxicity and population genetic analyses in kangaroo rats (Dipodomys merriami) exposed to radionuclide contamination at the Nevada test site, USA. Environ. Toxicol. Chem. 2001, 20:317-326.
25. Fiskesjo G. Allium Test for Screening Chemicals: Evaluation of Cytological Parameters 1997, Lewis Publisher, New York, pp. 307-333.
26. Koppen G., Verschaeve L. The alkaline comet test on plant cells: a new genotoxicity test for DNA strand breaks in Vicia faba root cells. Mutat. Res. 1996, 360:193-200.
27. Citterio S., Aina R., Labra M., Ghiani A., Fumagalli P., Sgorbati S., Santagostino A. Soil genotoxicity: a new strategy based on biomolecular tools and plants bioindicators. Environ. Sci. Technol. 2002, 36:2748-2753.
28. Fomin A., Paschke A., Arndt A. Assessment of the genotoxicity of mine-dumo material using the tradescantia-stamen hair (Trad-SHM) and the tradescantia-micronucleus (Trad-MCN) bioassays. Mutat. Res. 1999, 426:173-181.
29. Constantin M.J., Nilan R.A. Chromosome aberration assays in barley (Hordeum vulgare). A report of the U.S. environmental protection agency Gen-Tox program. Mutat. Res. 1982, 99:13-36.
30. Tardiff R.G., Lohman P.H.M., Wogan G.N. Methods to Assess DNA Damage and Repair 1994, John Wiley and Sons, New York.
31. Savva D. The use of Arbitrarily primed PCR (AP-PCR) fingerprinting detects exposure to genotoxic chemicals. Ecotoxicology 2000, 9:341-353.
32. Labra M., Di Fabio T., Grassi F., Regondi S.M., Bracale M., Vannini C., Agradi E. AFLP analysis as biomarker of exposure to organic and inorganic genotoxic substances in plants. Chemosphere 2003, 52:1183-1188.
33. Savva D. DNA fingerprinting as a biomarker assay in ecotoxicology. Toxicol. Ecotoxicol. News Rev. 1996, 3:110-114.
34. Savva D. Use of DNA fingerprinting to detect genotoxic effects. Ecotoxicol. Environ. Saf. 1998, 41:103-106.
35. Aras S., Kanli{dotless}tepe C., Duman D.C., Hali{dotless}ci{dotless} M.G., Beyaztas T. Assessment of air pollution genotoxicity by molecular markers in the exposed samples of Pseudevernia furfuracea (L.) Zopf in the province of Kayseri (Central Anatolia). J. Environ. Monit. 2010, 12:536-543.
36. Omran R.G. Peroxide levels and the activities of catalase, peroxidase, and indolacetic acid oxidase during and after chilling cucumber seedlings. Plant Physiol. 1980, 65:407-408.
37. Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 1976, 72:254-284.
38. Aras S., Cansaran D. Isolation of DNA for sequence analysis from herbarium material of some lichen species. Turk. J. Bot. 2006, 30:449-453.
39. Williams J., Kubelik A.R., Livak K.J. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acid Res. 1990, 18:6531-6535.
40. Baron M., Arellano J.B., Gerge L. Copper and photosystem II: a controversial relationship. Physiol. Plantarum 1995, 94:174-180.
41. Ouariti O., Boussama N., Zarrouk M. Cadmium- and copper-induced changes in tomato membrane lipids. Photochemistry 1997, 45:1343-1350.
42. Dinakar N., Nagajyothi P.C., Suresh S., Udaykiran Y., Damodharam T. Phytotoxicity of cadmium on protein, proline and antioxidant enzyme activities in growing Arachis hypogaea L. seedlings. J. Environ. Sci. 2008, 20:199-206.
43. Shah K., Kumar R.G., Verma S., Dubey R.S. Effect of cadmium on lipid peroxidation, superoxide anion generation and activities of antioxidant enzymes in growing rice seedlings. Plant Sci. 2001, 161:1135-1144.
44. Steinkellner H., Mun-Sik K., Helma C., Ecker S., Ma T.H., Horak O., Kundi M., Knasmüller S. Genotoxic effects of heavy metals: comparative investigation with plant bioassays. Environ. Mol. Mutagen. 1998, 31:183-191.
45. Piraino F., Aina R., Palin L., Prato N., Sgorbati S., Santagostino A., Citterio S. Air quality biomonitoring: assessment of air pollution genotoxicity in the Province of Novara (North Italy) by using Trifolium repens L. and molecular markers. Sci. Total Environ. 2006, 372:350-359.
46. Ellsworth D.L., Rittenhouse K.D., Honeycutt R.L. Artifactual variation in randomly amplified polymorphic DNA banding patterns. Biotechniques 1993, 14:214-217.
47. Atienzar F.A., Conradi M., Evenden A.J., Jha A.N., Depledge M.H. Qualitative assessment of genotoxicity using random amplified polymorphic DNA: comparison of genomic template stability with key fitness parameters in Daphnia magna exposed to benzo[a]pyrene. Environ. Toxicol. Chem. 1999, 18:2275-2282.
48. Becerril C., Ferrero M., Sanz F., Castano A. Detection of mitomycin C-induced genetic damage in fish cells by use of RAPD. Mutagenesis 1999, 14:449-456.
49. Grayson T.H., Cooper L.F., Atienzar F.A., Knowles M.R., Gilpin M.L. Molecular differentiation of Renibacterium salmoninarum isolates from world-wide locations. Appl. Environ. Microbiol. 1999, 65:961-968.
50. De Wolf H., Blust R., Backeljau T. The use of RAPD in ecotoxicology. Mutat. Res. 2004, 566:249-262.
51. Rothuizen J., Van Wolferen M. Randomly amplified DNA polymorphisms in dogs are reproducible and display Mendelian transmission. Anim. Genet. 1994, 25:13-18.
52. Benter T., Papadopoulos S., Pape M., Manns M., Poliwoda H. Optimization and reproducibility of random amplified polymorphic DNA in human. Anal. Biochem. 1995, 230:92-100.
53. Fraga J., Rodriguez J., Fuentes O., Fernandez-Calienes A., Castex M. Optimization of random amplified polymorphic DNA techniques for use in genetic studies of Cuban triatominae. Rev. Inst. Med. Trop. Sao Paulo 2005, 47:295-300.
54. Castano A., Becerril C. In vitro assessment of DNA damage after short- and long-term exposure to benzo(a)pyrene using RAPD and the RTG-2 fish cell line. Mutat. Res. 2004, 552:141-151.
55. Enan M.R. Application of random amplified polymorphic DNA to detect genotoxic effect of heavy metals. Biotechnol. Appl. Biochem. 2006, 43:147-154.
56. Kuroda S., Yano H., Koga-Ban Y., Tabei Y., Takaiwa F., Kayano T., Tanaka H. Identification of DNA polymorphism induced by X-ray and UV irradiation in plant cells. Jpn. Agric. Res. Quart. 1999, 33:223-226.
57. Atak C., Alikamanoglu S., Acik L., Canbolat Y. Induced of plastid mutations in soybean plant (Glycine max L. Merrill) with gamma radiation and determination with RAPD. Mutat. Res. 2004, 556:35-44.
58. Fernandes J.C., Henriques F.S. Biochemical, physiological and structural effect of excess copper in plants. Bot. Rev. 1991, 57:246-273.
59. 2+) on the growth of root, shoot and leaf of bean (Phaseolus vulgaris L.) seedlings. G.U. J. Sci. 2004, 17:1-10.
60. Wong M.H., Bradshaw A.D. A comparison of the toxicity of heavy metals, using root elongation of ryegrass, Lolium perene. New Phytol. 1982, 91:255-261.
61. Barcelo J., Poschenrieder C. Plant water relations as effected by heavy metal stress. J. Plant Nutr. 1990, 13(1990):1-37.
62. Singh P.K., Tewari R.K. Cadmium toxicity induced changes in plant water relations and oxidative metabolism of Brassica juncea L. plants. J. Environ. Biol. 2003, 24:107-112.
63. Anastassopoulou J. Metal-DNA interactions. J. Mol. Struct. 2003, 651/653:19-26.
64. Nelson J.R., Lawrence C.W., Hinkle D.C. Thymine-thymine dimer bypass by yeast DNA-polymerase-zeta. Science 1996, 272:1646-1649.