Genome-wide analysis of caesium and strontium accumulation in Saccharomyces cerevisiae

Yeast

Volumn 27, Issue 10, 2010, Pages 817-835

  Heuck, Sabine ^a   Gerstmann, Udo C ^a   Michalke, Bernhard ^a   Kanter, Ulrike ^a  

^a INSTITUTE OF EPIDEMIOLOGY   (Germany)

Author keywords

Caesium; Comparison of essential and non essential ions; Ion homeostasis; Strontium

Indexed keywords

CALCIUM; CESIUM 137; POTASSIUM; STRONTIUM 90;

ARTICLE; BIOGENESIS; CELL VACUOLE; FUNGAL GENETICS; FUNGAL STRAIN; GENETIC IDENTIFICATION; HAPLOIDY; HOMEOSTASIS; MOLECULAR MECHANICS; MUTANT; NONHUMAN; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE; YEAST;

BIOLOGICAL TRANSPORT; CALCIUM; CESIUM; COMPUTATIONAL BIOLOGY; CULTURE MEDIA; GENE EXPRESSION REGULATION, FUNGAL; GENOME, FUNGAL; HOMEOSTASIS; MUTATION; POTASSIUM; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; STRONTIUM; VACUOLES;

SACCHAROMYCES CEREVISIAE;

EID: 78650407595     PISSN: 0749503X     EISSN: 10970061     Source Type: Journal    
DOI: 10.1002/yea.1780     Document Type: Article

References (54)

1. Avery SV. 1995. Caesium accumulation by microorganisms: uptake mechanisms, cation competition, compartmentalization and toxicity. J Ind Microbiol Biotechnol 14: 76-84.
2. 2+ efflux. Appl Environ Microbiol 65: 1191-1197.
3. Bertl A, Ramos J, Ludwig J, et al. 2003. Characterization of potassium transport in wild-type and isogenic yeast strains carrying all combinations of trk1, trk2 and tok1 null mutations. Mol Microbiol 47: 767-780.
4. Bihler H, Slayman CL, Bertl A. 1998. NSC1: a novel high-current inward rectifier for cations in the plasma membrane of Saccharomyces cerevisiae. FEBS Lett 432: 59-64.
5. Bihler H, Slayman CL, Bertl A. 2002. Low-affinity potassium uptake by Saccharomyces cerevisiae is mediated by NSC1, a calcium-blocked non-specific cation channel. Biochim Biophys Acta 1558: 109-118.
6. Bollard EG, Butler GW. 1966. Mineral Nutrition of Plants. Annu Rev Plant Physiol Plant Mol Biol 17: 77.
7. Borst-Pauwels GW. 1981. Ion transport in yeast. Biochim Biophys Acta 650: 88-127.
8. Borst-Pauwels GW, Theuvenet AP. 1984. Apparent saturation kinetics of divalent cation uptake in yeast caused by a reduction in the surface potential. Biochim Biophys Acta 771: 171-176.
9. Bowers K, Stevens TH. 2005. Protein transport from the late Golgi to the vacuole in the yeast Saccharomyces cerevisiae. Biochim Biophys Acta 1744: 438-454.
10. Cowles CR, Odorizzi G, Payne GS, Emr SD. 1997. The AP-3 adaptor complex is essential for cargo-selective transport to the yeast vacuole. Cell 91: 109-118.
11. 2+ homeostasis. J Cell Biol 157: 1017-1028.
12. Cui J, Kaandorp JA. 2006. Mathematical modeling of calcium homeostasis in yeast cells. Cell Calcium 39: 337-348.
13. 2+ transport in Saccharomyces cerevisiae. J Exp Biol 196: 157-166.
14. 2+ ATPases in Saccharomyces cerevisiae. Mol Cell Biol 16: 2226-2237.
15. Del Vescovo V, Casagrande V, Bianchi MM, et al. 2008. Role of Hog1 and Yaf9 in the transcriptional response of Saccharomyces cerevisiae to cesium chloride. Physiol Genom 33: 110-120.
16. 2+ by yeast vacuoles. J Biol Chem 269: 7273-7278.
17. +-ATPase of Saccharomyces cerevisiae is required for efficient copper detoxification, mitochondrial function, and iron metabolism. Mol Gen Genet 241: 447-456.
18. Eide DJ, Clark S, Nair TM, et al. 2005. Characterization of the yeast ionome: a genome-wide analysis of nutrient mineral and trace element homeostasis in Saccharomyces cerevisiae. Genome Biol 6: R77.
19. Epstein E, Hagen CE. 1952. A Kinetic Study of the absorption of alkali cations by barley roots. Plant Physiol Biochem 27: 457-474.
20. Flis K, Hinzpeter A, Edelman A, Kurlandzka A. 2005. The functioning of mammalian ClC-2 chloride channel in Saccharomyces cerevisiae cells requires an increased level of Kha1p. Biochem J 390: 655-664.
21. Gaxiola RA, Fink GR, Hirschi KD. 2002. Genetic manipulation of vacuolar proton pumps and transporters. Plant Physiol 129: 967-973.
22. 90Sr for 28 winter wheat cultivars. Radiat Environ Biophys 45: 187-194.
23. Hampton CR, Broadley MR, White PJ. 2005. Short review: the mechanisms of radio-caesium uptake by Arabidopsis roots. Nukleonika 50: S3-S8.
24. Ideker T, Ozier O, Schwikowski B, et al. 2002. Discovering regulatory and signalling circuits in molecular interaction networks. Bioinformatics 18(suppl 1): S233-240.
25. Jo WJ, Loguinov A, Chang M, et al. 2008. Identification of genes involved in the toxic response of Saccharomyces cerevisiae against iron and copper overload by parallel analysis of deletion mutants. Toxicol Sci 101: 140-151.
26. +-ATPase. Microbiol Mol Biol Rev 70: 177-191.
27. Kiemer L, Costa S, Ueffing M, Cesareni G. 2007. WI-PHI: a weighted yeast interactome enriched for direct physical interactions. Proteomics 7: 932-943.
28. +-antiporter Nha1 influences the plasma membrane potential of Saccharomyces cerevisiae. FEMS Yeast Res 6: 792-800.
29. Le Lay P, Isaure MP, Sarry JE, et al. 2006. Metabolomic, proteomic and biophysical analyses of Arabidopsis thaliana cells exposed to a caesium stress. Influence of potassium supply. Biochimie 88: 1533-1547.
30. Lesuisse E, Knight SA, Courel M, et al. 2005. Genome-wide screen for genes with effects on distinct iron uptake activities in Saccharomyces cerevisiae. Genetics 169: 107-122.
31. + uptake in Saccharomyces cerevisiae. Mol Cell Biol 18: 926-935.
32. Madrid R, Gomez MJ, Ramos J, Rodriguez-Navarro A. 1998. Ectopic potassium uptake in trk1 trk2 mutants of Saccharomyces cerevisiae correlates with a highly hyperpolarized membrane potential. J Biol Chem 273: 14838-14844.
33. Maere S, Heymans K, Kuiper M. 2005. BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks. Bioinformatics 21: 3448-3449.
34. Menzel RG, Heald WR. 1955. Distribution of potassium, rubidium, cesium, calcium, and strontium within plants grown in nutrient solutions. Soil Science 80: 287-294.
35. 2+ homeostasis in the vps33δ vacuolar biogenesis mutant of Saccharomyces cerevisiae. J Biol Chem 274: 5939-5947.
36. Mulet JM, Alejandro S, Romero C, Serrano R. 2004. The trehalose pathway and intracellular glucose phosphates as modulators of potassium transport and general cation homeostasis in yeast. Yeast 21: 569-582.
37. + exchanger in a late endosomal compartment of yeast. Implications for vacuole biogenesis. J Biol Chem 273: 21054-21060.
38. +-ATPase. V-ATPase. J Bioenerg Biomembr 35: 281-289.
39. 2+ uptake and exacerbates the cdc1(Ts) growth defect. Mol Cell Biol 17: 6339-6347.
40. 2+ channel Cch1pMid1p is essential for tolerance to cold stress and iron toxicity. FEBS Lett 579: 5697-5703.
41. Phelan JP, Millson SH, Parker PJ, et al. 2006. Fab1p and AP-1 are required for trafficking of endogenously ubiquitylated cargoes to the vacuole lumen in S. cerevisiae. J Cell Sci 119: 4225-4234.
42. Posas F, Wurgler-Murphy SM, Maeda T, et al. 1996. Yeast HOG1 MAP kinase cascade is regulated by a multistep phosphorelay mechanism in the SLN1-YPD1-SSK1 'two-component' osmosensor. Cell 86: 865-875.
43. + concentrations and provides a caesium uptake pathway in Arabidopsis. J Exp Bot 59: 595-607.
44. + exchanger. J Bacteriol 180: 5860-5865.
45. Rodriguez-Navarro A. 2000. Potassium transport in fungi and plants. Biochim Biophys Acta 1469: 1-30.
46. 137Cs for 28 winter wheat cultivars as observed in field experiments. Radiat Environ Biophys 42: 275-284.
47. 137Cs in field-grown maize hybrids during two contrasting seasons: assessing the phenotypic variability and its genetic component. Radiat Environ Biophys 47: 241-252.
48. Shannon P, Markiel A, Ozier O, et al. 2003. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 13: 2498-2504.
49. Spang A. 2008. The life cycle of a transport vesicle. Cell Mol Life Sci 65: 2781-2789.
50. Stathopoulos AM, Cyert MS. 1997. Calcineurin acts through the CRZ1/TCN1-encoded transcription factor to regulate gene expression in yeast. Genes Dev 11: 3432-3444.
51. Wang TB, Gassmann W, Rubio F, et al. 1998. Rapid upregulation of HKT1, a high-affinity potassium transporter gene, in roots of barley and wheat following withdrawal of potassium. Plant Physiol 118: 651-659.
52. White PJ, Bowen HC, Demidchik V, et al. 2002. Genes for calcium-permeable channels in the plasma membrane of plant root cells. Biochim Biophys Acta BBA Biomembr 1564: 299-309.
53. White PJ, Broadley MR. 2000. Tansley Review No. 113. Mechanisms of caesium uptake by plants. New Phytol 147: 241-256.
54. Wright MB, Ramos J, Gomez MJ, et al. 1997. Potassium transport by amino acid permeases in Saccharomyces cerevisiae. J Biol Chem 272: 13647-13652.