Metabolomic, proteomic and biophysical analyses of Arabidopsis thaliana cells exposed to a caesium stress. Influence of potassium supply

Biochimie

Volumn 88, Issue 11, 2006, Pages 1533-1547

  Le Lay, P ^a   Isaure, M P ^a   Sarry, J E ^a   Kuhn, L ^a   Fayard, B ^b   Le Bail, J L ^a   Bastien, O ^a   Garin, J ^a   Roby, C ^a   Bourguignon, J ^a  

^a CEA GRENOBLE   (France)

^b EUROPEAN SYNCHROTRON RADIATION FACILITY   (France)

Author keywords

2D gel electrophoresis; Arabidopsis thaliana; Caesium toxicity; mass spectrometry; metabolic NMR; potassium depletion; proteomics; synchrotron X ray fluorescence microscopy

Indexed keywords

CESIUM; CHLOROPHYLL; POTASSIUM; PROTEOME;

ARABIDOPSIS; ARTICLE; CELL SUSPENSION; GEL ELECTROPHORESIS; METABOLOMICS; MOLECULAR MODEL; NONHUMAN; NUCLEAR MAGNETIC RESONANCE; PHYTOTOXICITY; PROTEOMICS; CELL DIVISION; DRUG EFFECT; GROWTH, DEVELOPMENT AND AGING; KINETICS; METABOLISM; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY;

ARABIDOPSIS; ARABIDOPSIS THALIANA;

ARABIDOPSIS; CELL DIVISION; CESIUM; CESIUM RADIOISOTOPES; CHLOROPHYLL; KINETICS; MAGNETIC RESONANCE SPECTROSCOPY; POTASSIUM; PROTEOME;

EID: 33751255671     PISSN: 03009084     EISSN: 61831638     Source Type: Journal    
DOI: 10.1016/j.biochi.2006.03.013     Document Type: Article

References (52)

1. Raskin I.I., Smith R.D., and Salt D.E. Phytoremediation of metals: using plants to remove pollutants from the environment. Curr. Opin. Biotechnol. 8 (1997) 221-226
2. 137Cs from a contaminated soil. Plant Soil 195 (1997) 99-106
3. Sheahan J.J., Ribeiro-Neto L., and Sussman M.R. Cesium-insensitive mutants of Arabidopsis thaliana. Plant J. 3 (1993) 647-656
4. Heredia M.A., Zapico R., Garcia-Sanchez M.J., and Fernandez J.A. Effect of calcium, sodium and pH on uptake and accumulation of radiocesium by Riccia fluitans. Aquat. Bot. 74 (2002) 245-256
5. White P.J., and Broadley M.R. Mechanisms of caesium uptake by plants. New Phytol. 147 (2000) 241-256
6. Rodriguez-Navarro A. Potassium transport in fungi and plants. Biochim. Biophys. Acta 1469 (2000) 1-30
7. + transport mechanisms. Biochim. Biophys. Acta 1465 (2000) 127-139
8. + channels. Plant Physiol. 114 (1997) 1141-1149
9. Leigh R.A. Potassium homeostasis and membrane transport. Journal of Plant Nutrition and Soil Science Zeitschrift Fur Pflanzenernahrung Und Bodenkunde 164 (2001) 193-198
10. + transport in higher plants. Annu. Rev. Plant Biol. 54 (2003) 575-603
11. Roca Jove M.C., and Vallejo Calzada V.R. Predicting radiocaesium root uptake based on potassium uptake parameters. A mechanistic approach. Plant Soil 222 (2000) 35-49
12. Zhu Y.G., Shaw G., F. N.A., and Wilkins B.T. Effects of external potassium supply on compartmentation and flux characteristics of radiocaesium in intact spring wheat roots. Ann. Bot. (Lond.) 84 (1999) 639-644
13. + transport. Plant J. 10 (1996) 579-589
14. Sahr T., Voigt G., Paretzke H.G., Schramel P., and Ernst D. Caesium affected gene expression in Arabidopsis thaliana. New Phytol. 165 (2005) 747-754
15. Hampton C.R., Bowen H.C., Broadley M.R., Hammond J.P., Mead A., Payne K.A., Pritchard J., and White P.J. Cesium toxicity in Arabidopsis. Plant Physiol. 136 (2004) 3824-3837
16. Ratcliffe R.G., and Shachar-Hill Y. Probing plant metabolism with NMR. Annu. Rev. Plant Physiol. Plant Mol. Biol. 52 (2001) 499-526
17. Sarry J.-E., Kuhn L., Le Lay P., Garin J., and Bourguignon J. Dynamics of Arabidopsis thaliana soluble proteome in response to different nutrient culture conditions. Electrophoresis 27 (2006) 495-507
18. Chandler M.T., Tandeau de Marsac N., and de Kouchkovsky Y. Photosynthetic growth of tobacco cells in liquid suspension. Canadian Journal of Botany Revue Canadienne De Botanique 50 (1972) 2265-2272
19. Inskeep W.P., and Bloom P.R. Extinction coefficients of chlorophyll a and b in N,N-dimethylformamide and 80% acetone. Plant Physiol. 77 (1985) 483-485
20. Roby C., Martin J.-B., Bligny R., and Douce R. Biochemical changes during sucrose deprivation in higher plant cells. Phosphorus-31 nuclear magnetic resonance studies. J. Biol. Chem. 262 (1987) 5000-5007
21. 133Cs-NMR a probe for studying subcellular compartmentation and ion uptake in maize root tissue. Biochim. Biophys. Acta 1054 (1990) 169-175
22. 133Cs nuclear magnetic resonance evidence for variable cytosolic and cytoplasmic nitrate pools in maize root tips. Plant Cell Environ. 28 (2005) 1379-1387
23. 31P NMR. Nature 283 (1980) 870-872
24. 31P-NMR) and lactate during normoxic and anoxic transitions in maize root tips. Eur. J. Biochem. 200 (1991) 477-482
25. Fan T.W.M. In: Shachar-Hill Y., and Pfeffer P.E. (Eds). Nuclear Magnetic Resonance in Plant Biology (1996), The American Society of Plant Physiologists 181-255
26. Susini J., Salome M., Fayard B., Ortega R., and Kaulich B. The scanning X-ray microprobe at the ESRF "X-ray microscopy" beamline. Surf. Rev. Lett. 9 (2002) 203-211
27. Vanespen P., Janssens K., and Nobels J. Axil-PC, software for the analysis of complex X-ray spectra. Chemom. Intell. Lab. Syst. 1 (1986) 109-114
28. Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1976) 248-254
29. Ihaka R., and Gentleman R. R: a language for data analysis and graphics. Journal of Computationnal and Graphical Statistics 5 (1996) 299-314
30. Manly B.F.J. Randomization, Bootstrap and Monte Carlo Methods in Biology (1997), CRC, London 34-68
31. Papayannopoulos I.A. The interpretation of collision-induced dissociation tandem mass spectra of peptides. Mass Spectro. Rev. 14 (1995) 49-73
32. Epstein E. Mineral Nutrition in Plants: Principles and Perspectives (1972), John Wiley and Sons, New-York
33. Shalygo N.V., Mock H.P., Averina N.G., and Grimm B. Photodynamic action of uroporphyrin and protochlorophyllide in greening barley leaves treated with cesium chloride. J. Photochem. Photobiol. B 42 (1998) 151-158
34. Isaure M.P., Fraysse A., Devès G., Le Lay P., Fayard B., Susini J., Bourguignon J., Ortega R., Micro-chemical imaging of caesium distribution in Arabidopsis thaliana plant and its interaction with potassium and essential trace elements, submitted.
35. Twining B.S., Baines S.B., Fischer N.S., Jacobsen C., and Maser J. Quantification and localization of trace metals in natural cells using a synchrotron X-Ray microfluorescence microprobe. Journal de Physique IV 104 (2003) 435-438
36. Takemoto K., Ueki T., Fayard B., Yamamoto A., Salome M., Scippa S., Susini J., Uyama T., Michibata H., and Kihara H. Local distribution of vanadium in the living blood cells of ascidians by fluorescence scanning X-ray microscopy ID 21 at ESRF. Journal de Physique IV 104 (2003) 333-336
37. Ben-Izhak Monselise E., Parola A.H., and Kost D. Low-frequency electromagnetic fields induce a stress effect upon higher plants, as evident by the universal stress signal, alanine. Biochem. Biophys. Res. Chem. 302 (2003) 427-434
38. Smith C.R., Knowles V.L., and Plaxton W.C. Purification and characterization of cytosolic pyruvate kinase from Brassica napus (rapeseed) suspension cell cultures: implications for the integration of glycolysis with nitrogen assimilation. Eur. J. Biochem. 267 (2000) 4477-4485
39. Hasegawa H., Bressan R.A., Zhu J.-K., and Bohnert H.J. Plant cellular and molecular responses to high salinity. Annu. Rev. Plant Physiol. Plant Mol. Biol. 51 (2000) 463-499
40. Wang H.L., Lee P.D., Chen W.L., Huang D.J., and Su J.C. Osmotic stress-induced changes of sucrose metabolism in cultured sweet potato cells. J. Exp. Bot. 51 (2000) 1991-1999
41. Casati P., Drincovich M.F., and Edwards G.E. Malate metabolism by NADP-malic enzyme in plant defense. Photosynth. Res. 61 (1999) 99-105
42. Crecelius F., Streb P., and Feierabend J. Malate metabolism and reactions of oxidoreduction in cold-hardened winter rye (Secale cereale L.) leaves. J. Exp. Bot. 54 (2003) 1075-1083
43. Ilag L.L., Kumar A.M., and Soll D. Light regulation of chlorophyll biosynthesis at the level of 5-aminolevulinate formation in Arabidopsis. Plant Cell 6 (1994) 265
44. Liu J., and Zhu J.-K. Proline accumulation and salt induced gene expression in a salt-hypersensitive mutant of Arabidopsis. Plant Physiol. 114 (1997) 591-596
45. Hare P.D., Cress W.A., and van Staden J. Proline synthesis and degradation-a model system for elucidating stress-related signal transduction. J. Exp. Bot. 50 (1999) 413-434
46. + deficiency in Arabidopsis thaliana. Proteomics 4 (2004) (00000)
47. Hua X.J., Van de Cotte B., Van Montagu M., and Verbruggen N. The 5′ untranslated region of the At-P5R gene is involved in both transcriptional and post-transcriptional regulation. Plant J. 26 (2001) 157-169
48. Kiyosue T., Yoshiba Y., Yamaguchi-Shinozaki K., and Shinozaki K. A nuclear gene encoding mitochondrial proline dehydrogenase, an enzyme involved in proline metabolism, is upregulated by proline but downregulated by dehydration in Arabidopsis. Plant Cell 8 (1996) 1323-1335
49. Smalle J., and Vierstra R.D. The ubiquitin 26S proteasome proteolytic pathway. Annu. Rev. Plant Biol. 55 (2004) 555-590
50. Shin R., and Schachtman D.P. Hydrogen peroxide mediates plant root cell response to nutrient deprivation. Proc. Natl. Acad. Sci. USA 101 (2004) 8827-8832
51. Schweighofer A., Hirt H., and Meskiene I. Plant PP2C phosphatases: emerging functions in stress signaling. Trends Plant Sci. 9 (2004) 236-243
52. Cherel I., Michard E., Platet N., Mouline K., Alcon C., Sentenac H., and Thibaud J.B. Physical and functional interaction of the Arabidopsis K(+) channel AFT2 and phosphatase AtPP2CA. Plant Cell 14 (2002) 1133-1146