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Volumn 11, Issue 1, 2011, Pages 57-63

Full genomic analysis of a simian SA11-like G3P[2] rotavirus strain isolated from an asymptomatic infant: Identification of novel VP1, VP6 and NSP4 genotypes

Author keywords

Group A rotavirus; Human; Novel genotypes; Simian; Zoonosis

Indexed keywords

PROTEIN VP1; PROTEIN VP2; PROTEIN VP3; PROTEIN VP4; PROTEIN VP6; PROTEIN VP7; ROTAVIRUS NONSTRUCTURAL PROTEIN 1; ROTAVIRUS NONSTRUCTURAL PROTEIN 2; ROTAVIRUS NONSTRUCTURAL PROTEIN 3; ROTAVIRUS NONSTRUCTURAL PROTEIN 4; ROTAVIRUS NONSTRUCTURAL PROTEIN 5; UNCLASSIFIED DRUG; VIRUS PROTEIN;

EID: 78650185097     PISSN: 15671348     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.meegid.2010.10.010     Document Type: Article
Times cited : (20)

References (38)
  • 1
    • 23044481567 scopus 로고    scopus 로고
    • Unexpected detection of simian SA11-human reassortant strains of rotavirus G3P[8] genotype from diarrhea epidemic among tribal children of Western India
    • Awachat P.S., Kelkar S.D. Unexpected detection of simian SA11-human reassortant strains of rotavirus G3P[8] genotype from diarrhea epidemic among tribal children of Western India. J. Med. Virol. 2005, 77:128-135.
    • (2005) J. Med. Virol. , vol.77 , pp. 128-135
    • Awachat, P.S.1    Kelkar, S.D.2
  • 4
    • 34548407520 scopus 로고    scopus 로고
    • Rotaviruses and their replication
    • Lippincott, Williams & Wilkins, Philadelphia, B.N. Fields, D.M. Knipe, P.M. Howley, D.E. Griffin, R.A. Lamb, M.A. Martin, B. Roizman, S.E. Straus (Eds.)
    • Estes M.K., Kapikian A.Z. Rotaviruses and their replication. Fields Virology 2007, 1917-1974. Lippincott, Williams & Wilkins, Philadelphia. 5th ed. B.N. Fields, D.M. Knipe, P.M. Howley, D.E. Griffin, R.A. Lamb, M.A. Martin, B. Roizman, S.E. Straus (Eds.).
    • (2007) Fields Virology , pp. 1917-1974
    • Estes, M.K.1    Kapikian, A.Z.2
  • 6
    • 77956285928 scopus 로고    scopus 로고
    • Complete genome constellation of a caprine group A rotavirus strain reveals common evolution with ruminant and human rotavirus strains
    • Ghosh S., Alam M.M., Ahmed M.U., Talukdar R.I., Paul S.K., Kobayashi N. Complete genome constellation of a caprine group A rotavirus strain reveals common evolution with ruminant and human rotavirus strains. J. Gen. Virol. 2010, 91:2367-2373.
    • (2010) J. Gen. Virol. , vol.91 , pp. 2367-2373
    • Ghosh, S.1    Alam, M.M.2    Ahmed, M.U.3    Talukdar, R.I.4    Paul, S.K.5    Kobayashi, N.6
  • 7
    • 70350497604 scopus 로고    scopus 로고
    • Molecular characterization of full-length genomic segment 2 of a bovine picobirnavirus (PBV) strain: evidence for high genetic diversity with genogroup I PBVs
    • Ghosh S., Kobayashi N., Nagashima S., Naik T.N. Molecular characterization of full-length genomic segment 2 of a bovine picobirnavirus (PBV) strain: evidence for high genetic diversity with genogroup I PBVs. J. Gen. Virol. 2009, 90:2519-2524.
    • (2009) J. Gen. Virol. , vol.90 , pp. 2519-2524
    • Ghosh, S.1    Kobayashi, N.2    Nagashima, S.3    Naik, T.N.4
  • 9
    • 33745156265 scopus 로고    scopus 로고
    • Molecular characterization of a porcine group A rotavirus strain with G12 genotype specificity
    • Ghosh S., Varghese V., Samajdar S., Bhattacharya S.K., Kobayashi N., Naik T.N. Molecular characterization of a porcine group A rotavirus strain with G12 genotype specificity. Arch. Virol. 2006, 151:1329-1344.
    • (2006) Arch. Virol. , vol.151 , pp. 1329-1344
    • Ghosh, S.1    Varghese, V.2    Samajdar, S.3    Bhattacharya, S.K.4    Kobayashi, N.5    Naik, T.N.6
  • 10
    • 55549113560 scopus 로고    scopus 로고
    • Group A human rotavirus genomics: evidence that gene constellations are influenced by viral protein interactions
    • Heiman E.M., McDonald S.M., Barro M., Taraporewala Z.F., Bar-Magen T., Patton J.T. Group A human rotavirus genomics: evidence that gene constellations are influenced by viral protein interactions. J. Virol. 2008, 82:11106-11116.
    • (2008) J. Virol. , vol.82 , pp. 11106-11116
    • Heiman, E.M.1    McDonald, S.M.2    Barro, M.3    Taraporewala, Z.F.4    Bar-Magen, T.5    Patton, J.T.6
  • 11
    • 0019966822 scopus 로고
    • Rapid diagnosis of rotavirus infection by direct detection of viral nucleic acid in silver-stained polyacrylamide gels
    • Herring A.J., Inglis N.F., Ojeh C.K., Snodgrass D.R., Menzies J.D. Rapid diagnosis of rotavirus infection by direct detection of viral nucleic acid in silver-stained polyacrylamide gels. J. Clin. Microbiol. 1982, 16:473-477.
    • (1982) J. Clin. Microbiol. , vol.16 , pp. 473-477
    • Herring, A.J.1    Inglis, N.F.2    Ojeh, C.K.3    Snodgrass, D.R.4    Menzies, J.D.5
  • 12
    • 30844465056 scopus 로고    scopus 로고
    • A rotavirus strain isolated from pig-tailed macaque (Macaca nemestrina) with diarrhea bears a P6[1]:G8 specificity
    • Hoshino Y., Honma S., Jones R.W., Santos N., Nakagomi O., Nakagomi T., Kapikian A.Z., Thouless M.E. A rotavirus strain isolated from pig-tailed macaque (Macaca nemestrina) with diarrhea bears a P6[1]:G8 specificity. Virology 2006, 345:1-12.
    • (2006) Virology , vol.345 , pp. 1-12
    • Hoshino, Y.1    Honma, S.2    Jones, R.W.3    Santos, N.4    Nakagomi, O.5    Nakagomi, T.6    Kapikian, A.Z.7    Thouless, M.E.8
  • 14
    • 0025187601 scopus 로고
    • Identification of operationally overlapping and independent cross-reactive neutralization regions on human rotavirus VP4
    • Kobayashi N., Taniguchi K., Urasawa S. Identification of operationally overlapping and independent cross-reactive neutralization regions on human rotavirus VP4. J. Gen. Virol. 1990, 71:2615-2623.
    • (1990) J. Gen. Virol. , vol.71 , pp. 2615-2623
    • Kobayashi, N.1    Taniguchi, K.2    Urasawa, S.3
  • 15
    • 0026380972 scopus 로고
    • Preparation and characterization of a neutralizing monoclonal antibody directed to VP4 of rotavirus strain K8 which has unique VP4 neutralization epitopes
    • Kobayashi N., Taniguchi K., Urasawa T., Urasawa S. Preparation and characterization of a neutralizing monoclonal antibody directed to VP4 of rotavirus strain K8 which has unique VP4 neutralization epitopes. Arch. Virol. 1991, 121:153-162.
    • (1991) Arch. Virol. , vol.121 , pp. 153-162
    • Kobayashi, N.1    Taniguchi, K.2    Urasawa, T.3    Urasawa, S.4
  • 16
    • 0001000040 scopus 로고
    • The cytopathic effects of ververt monkey viruses
    • Malherbe H., Harwin R., Ulrich M. The cytopathic effects of ververt monkey viruses. S. Afr. Med. J. 1963, 37:407-411.
    • (1963) S. Afr. Med. J. , vol.37 , pp. 407-411
    • Malherbe, H.1    Harwin, R.2    Ulrich, M.3
  • 21
    • 54449092749 scopus 로고    scopus 로고
    • Two out of the 11 genes of an unusual human G6P[6] rotavirus isolate are of bovine origin
    • Matthijnssens J., Rahman M., Van Ranst M. Two out of the 11 genes of an unusual human G6P[6] rotavirus isolate are of bovine origin. J. Gen. Virol. 2008, 89:2630-2635.
    • (2008) J. Gen. Virol. , vol.89 , pp. 2630-2635
    • Matthijnssens, J.1    Rahman, M.2    Van Ranst, M.3
  • 23
  • 25
    • 11144247913 scopus 로고    scopus 로고
    • Development of a rotavirus-shedding model in rhesus macaques, using a homologous wild-type rotavirus of a new P genotype
    • McNeal M.M., Sestak K., Choi A.H., Basu M., Cole M.J., Aye P.P., Bohm R.P., Ward R.L. Development of a rotavirus-shedding model in rhesus macaques, using a homologous wild-type rotavirus of a new P genotype. J. Virol. 2005, 79:944-954.
    • (2005) J. Virol. , vol.79 , pp. 944-954
    • McNeal, M.M.1    Sestak, K.2    Choi, A.H.3    Basu, M.4    Cole, M.J.5    Aye, P.P.6    Bohm, R.P.7    Ward, R.L.8
  • 26
    • 55949125844 scopus 로고    scopus 로고
    • Phylogenetic analysis of rotaviruses with genotypes G1, G2, G9 and G12 in Bangladesh: evidence for a close relationship between rotaviruses from children and adults
    • Paul S.K., Kobayashi N., Nagashima S., Ishino M., Watanabe S., Alam M.M., Ahmed M.U., Hossain M.A., Naik T.N. Phylogenetic analysis of rotaviruses with genotypes G1, G2, G9 and G12 in Bangladesh: evidence for a close relationship between rotaviruses from children and adults. Arch. Virol. 2008, 153:1999-2012.
    • (2008) Arch. Virol. , vol.153 , pp. 1999-2012
    • Paul, S.K.1    Kobayashi, N.2    Nagashima, S.3    Ishino, M.4    Watanabe, S.5    Alam, M.M.6    Ahmed, M.U.7    Hossain, M.A.8    Naik, T.N.9
  • 27
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N., Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 1987, 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 28
    • 11244302672 scopus 로고    scopus 로고
    • Global distribution of rotavirus serotypes/genotypes and its implication for the development and implementation of an effective rotavirus vaccine
    • Santos N., Hoshino Y. Global distribution of rotavirus serotypes/genotypes and its implication for the development and implementation of an effective rotavirus vaccine. Rev. Med. Virol. 2005, 15:29-56.
    • (2005) Rev. Med. Virol. , vol.15 , pp. 29-56
    • Santos, N.1    Hoshino, Y.2
  • 29
    • 62749113376 scopus 로고    scopus 로고
    • Evidence of interspecies transmission and reassortment among avian group A rotaviruses
    • Schumann T., Hotzel H., Otto P., Johne R. Evidence of interspecies transmission and reassortment among avian group A rotaviruses. Virology 2009, 386:334-343.
    • (2009) Virology , vol.386 , pp. 334-343
    • Schumann, T.1    Hotzel, H.2    Otto, P.3    Johne, R.4
  • 30
    • 33847018523 scopus 로고    scopus 로고
    • Genome heterogeneity of SA11 rotavirus due to reassortment with "O" agent
    • Small C., Barro M., Brown T.L., Patton J.T. Genome heterogeneity of SA11 rotavirus due to reassortment with "O" agent. Virology 2007, 359:415-424.
    • (2007) Virology , vol.359 , pp. 415-424
    • Small, C.1    Barro, M.2    Brown, T.L.3    Patton, J.T.4
  • 31
    • 0018843469 scopus 로고
    • Antigenic comparisons of two new rotaviruses from rhesus monkeys
    • Stuker G., Oshiro L.S., Schmidt N.J. Antigenic comparisons of two new rotaviruses from rhesus monkeys. J. Clin. Microbiol. 1980, 11:202-203.
    • (1980) J. Clin. Microbiol. , vol.11 , pp. 202-203
    • Stuker, G.1    Oshiro, L.S.2    Schmidt, N.J.3
  • 32
    • 0023188935 scopus 로고
    • Direct serotyping of human rotavirus in stools by an enzyme-linked immunosorbent assay using serotype 1-, 2-, 3-, and 4-specific monoclonal antibodies to VP7
    • Taniguchi K., Urasawa T., Morita Y., Greenberg H.B., Urasawa S. Direct serotyping of human rotavirus in stools by an enzyme-linked immunosorbent assay using serotype 1-, 2-, 3-, and 4-specific monoclonal antibodies to VP7. J. Infect. Dis. 1987, 155:1159-1166.
    • (1987) J. Infect. Dis. , vol.155 , pp. 1159-1166
    • Taniguchi, K.1    Urasawa, T.2    Morita, Y.3    Greenberg, H.B.4    Urasawa, S.5
  • 33
    • 0021232341 scopus 로고
    • Production of subgroup-specific monoclonal antibodies against human rotaviruses and their application to an enzyme-linked immunosorbent assay for subgroup determination
    • Taniguchi K., Urasawa T., Urasawa S., Yasuhara T. Production of subgroup-specific monoclonal antibodies against human rotaviruses and their application to an enzyme-linked immunosorbent assay for subgroup determination. J. Med. Virol. 1984, 14:115-125.
    • (1984) J. Med. Virol. , vol.14 , pp. 115-125
    • Taniguchi, K.1    Urasawa, T.2    Urasawa, S.3    Yasuhara, T.4
  • 35
    • 62749135922 scopus 로고    scopus 로고
    • The first complete genome sequence of a chicken group A rotavirus indicates independent evolution of mammalian and avian strains
    • Trojnar E., Otto P., Johne R. The first complete genome sequence of a chicken group A rotavirus indicates independent evolution of mammalian and avian strains. Virology 2009, 386:325-333.
    • (2009) Virology , vol.386 , pp. 325-333
    • Trojnar, E.1    Otto, P.2    Johne, R.3
  • 36
    • 53249109344 scopus 로고    scopus 로고
    • Whole genome sequence and phylogenetic analyses reveal human rotavirus G3P[3] strains Ro1845 and HCR3A are examples of direct virion transmission of canine/feline rotaviruses to humans
    • Tsugawa T., Hoshino Y. Whole genome sequence and phylogenetic analyses reveal human rotavirus G3P[3] strains Ro1845 and HCR3A are examples of direct virion transmission of canine/feline rotaviruses to humans. Virology 2008, 380:344-353.
    • (2008) Virology , vol.380 , pp. 344-353
    • Tsugawa, T.1    Hoshino, Y.2
  • 37
    • 77953527094 scopus 로고    scopus 로고
    • Full genomic analysis of a porcine-bovine reassortant G4P[6] rotavirus strain R479 isolated from an infant in China
    • Wang Y.H., Kobayashi N., Nagashima S., Zhou X., Ghosh S., Peng J.S., Hu Q., Zhou D.J., Yang Z.Q. Full genomic analysis of a porcine-bovine reassortant G4P[6] rotavirus strain R479 isolated from an infant in China. J. Med. Virol. 2010, 82:1094-1102.
    • (2010) J. Med. Virol. , vol.82 , pp. 1094-1102
    • Wang, Y.H.1    Kobayashi, N.2    Nagashima, S.3    Zhou, X.4    Ghosh, S.5    Peng, J.S.6    Hu, Q.7    Zhou, D.J.8    Yang, Z.Q.9


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