Correlation between desorption force measured by atomic force microscopy and adsorption free energy measured by surface plasmon resonance spectroscopy for peptide - Surface interactions

Langmuir

Volumn 26, Issue 24, 2010, Pages 18852-18861

  Wei, Yang ^a   Latour, Robert A ^a  

^a South   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADSORPTION BEHAVIOR; ADSORPTION FORCE; ADSORPTION FREE ENERGY; AFM; AFM METHODS; ALKANETHIOLS; DATA INTERPRETATION; EXPERIMENTAL DATABASE; FLAT SURFACES; FORCE FIELD PARAMETERS; HOST-GUEST PEPTIDES; LINEAR CORRELATION; MOLECULAR SIMULATIONS; NANO-METER SCALE; PEPTIDE-SURFACE INTERACTIONS; PROTEIN ADSORPTION; STANDARDIZED METHODS; SURFACE PLASMON RESONANCE SPECTROSCOPY; SURFACE SYSTEMS; THIN LAYERS;

ADSORPTION; ATOMIC FORCE MICROSCOPY; ATOMIC SPECTROSCOPY; BIOSENSORS; DESORPTION; FREE ENERGY; PEPTIDES; PLASMONS; SELF ASSEMBLED MONOLAYERS;

SURFACE PLASMON RESONANCE;

PEPTIDE;

ADSORPTION; AMINO ACID SEQUENCE; ARTICLE; ATOMIC FORCE MICROSCOPY; CHEMICAL PHENOMENA; CHEMISTRY; METABOLISM; METHODOLOGY; PROTEIN BINDING; SURFACE PLASMON RESONANCE; THERMODYNAMICS;

ADSORPTION; AMINO ACID SEQUENCE; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; MICROSCOPY, ATOMIC FORCE; PEPTIDES; PROTEIN BINDING; SURFACE PLASMON RESONANCE; THERMODYNAMICS;

EID: 78650183774     PISSN: 07437463     EISSN: 15205827     Source Type: Journal    
DOI: 10.1021/la103685d     Document Type: Article

References (61)

1. Wei, Y.; Latour, R. A. Determination of the adsorption free energy for peptide-surface interactions by SPR spectroscopy Langmuir 2008, 24, 6721-6797
2. Singh, N.; Husson, S. M. Adsorption thermodynamics of short-chain peptides on charged and uncharged nanothin polymer films Langmuir 2006, 22, 8443-8451
3. Wei, Y.; Latour, R. A. Benchmark experimental data set and assessment of adsorption free energy for peptide-surface interactions Langmuir 2009, 25, 5637-5646
4. Seker, U. O. S.; Wilson, B.; Sahin, D.; Tamerler, C.; Sarikaya, M. Quantitative affinity of genetically engineered repeating polypeptides to inorganic surfaces Biomacromolecules 2008, 10, 250-257
5. Luk, Y.-Y.; Kato, M.; Mrksich, M. Self-assembled monolayers of alkanethiolates presenting mannitol groups are inert to protein adsorption and cell attachment Langmuir 2000, 16, 9604-9608
6. Matharu, Z.; Bandodkar, A. J.; Sumana, G.; Solanki, P. R.; Ekanayake, E. M. I. M.; Kaneto, K.; Gupta, V.; Malhotra, B. D. Low density lipoprotein detection based on antibody immobilized self-assembled monolayer: investigations of kinetic and thermodynamic properties J. Phys. Chem. B 2009, 113, 14405-14412
7. Vellore, N. A.; Yancey, J. A.; Collier, G.; Latour, R. A.; Stuart, S. J. Assessment of the transferability of a protein force field for the simulation of peptide-surface interactions Langmuir 2010, 26, 7396-7404
8. Allison, D. P.; Hinterdorfer, P.; Han, W. Biomolecular force measurements and the atomic force microscope Curr. Opin. Biotechnol. 2002, 13, 47-51 (Pubitemid 34146547)
9. Lal, R.; John, S. A. Biological applications of atomic force microscopy Am. J. Physiol.: Cell Physiol. 1994, 266, C1-C21
10. Lee, C.-K.; Wang, Y.-M.; Huang, L.-S.; Lin, S. Atomic force microscopy: determination of unbinding force, off rate and energy barrier for protein-ligand interaction Micron 2007, 38, 446-461
11. Muller, D. J.; Dufrene, Y. F. Atomic force microscopy as a multifunctional molecular toolbox in nanobiotechnology Nat. Nanotechnol. 2008, 3, 261-269
12. Willemsen, O. H.; Snel, M. M.; Cambi, A.; Greve, J.; De Grooth, B. G.; Figdor, C. G. Biomolecular interactions measured by atomic force microscopy Biophys. J. 2000, 79, 3267-3281
13. Blanchette, C. D.; Loui, A.; Ratto, T. V. Tip Functionalization: Applications to Chemical Force Spectroscopy. In Handbook of Molecular Force Spectroscopy; Noy, A., Ed.; Springer: New York, 2008; pp 185 - 203.
14. Hards, A.; Zhou, C.; Seitz, M.; Brauchle, C.; Zumbusch, A. Simultaneous AFM manipulation and fluorescence imaging of single DNA strands ChemPhysChem 2005, 6, 534-540
15. Horinek, D.; Serr, A.; Bonthuis, D. J.; Bostrom, M.; Kunz, W.; Netz, R. R. Molecular hydrophobic attraction and ion-specific effects studied by molecular dynamics Langmuir 2008, 24, 1271-1283
16. Horinek, D.; Serr, A.; Geisler, M.; Pirzer, T.; Slotta, U.; Lud, S. Q.; Garrido, J. A.; Scheibel, T.; Hugel, T.; Netz, R. R. Peptide adsorption on a hydrophobic surface results from an interplay of solvation, surface, and intrapeptide forces Proc. Natl. Acad. Sci. U.S.A. 2008, 105, 2842-2847
17. Kamruzzahan, A. S. M.; Ebner, A.; Wildling, L.; Kienberger, F.; Riener, C. K.; Hahn, C. D.; Pollheimer, P. D.; Winklehner, P.; Holzl, M.; Lackner, B.; Schorkl, D. M.; Hinterdorfer, P.; Gruber, H. J. Antibody linking to atomic force microscope tips via disulfide bond formation Bioconjugate Chem. 2006, 17, 1473-1481
18. Pirzer, T.; Geisler, M.; Scheibel, T.; Hugel, T. Single molecule force measurements delineate salt, pH and surface effects on biopolymer adhesion Phys. Biol. 2009, 6, 025004
19. Scherer, A.; Zhou, C.; Michaelis, J.; Brauchle, C.; Zumbusch, A. Intermolecular interactions of polymer molecules determined by single-molecule force spectroscopy Macromolecules 2005, 38, 9821-9825
20. Geisler, M.; Pirzer, T.; Ackerschott, C.; Lud, S.; Garrido, J.; Scheibel, T.; Hugel, T. Hydrophobic and Hofmeister effects on the adhesion of spider silk proteins onto solid substrates: an AFM-based single-molecule study Langmuir 2008, 24, 1350-1355
21. Seitz, M.; Friedsam, C.; Jostl, W.; Hugel, T.; Gaub, H. E. Probing solid surfaces with single polymers ChemPhysChem 2003, 4, 986-990
22. Chilkoti, A.; Boland, T.; Ratner, B. D.; Stayton, P. S. The relationship between ligand-binding thermodynamics and protein-ligand interaction forces measured by atomic force microscopy Biophys. J. 1995, 69, 2125-2130
23. Mandapativ, R. R.; Mahalakshmi, A.; Moganty, R. R. Specific interactions between amino acid side chains-a partial molar volume study Can. J. Chem. 1988, 66, 487-490
24. Wang, H.; Chen, S.; Li, L.; Jiang, S. Improved method for the preparation of carboxylic acid and amine terminated self-assembled monolayers of alkanethiolates Langmuir 2005, 21, 2633-2636
25. Vernekar, V. N.; Latour, R. A. Adsorption thermodynamics of a mid-chain peptide residue on functionalized SAM surfaces using SPR Mater. Res. Innovations 2005, 9, 337-353
26. Li, X.; Husson, S. M. Adsorption of dansylated amino acids on molecularly imprinted surfaces: a surface plasmon resonance study Biosens. Bioelectron. 2006, 22, 336-348
27. Seker, U. O.; Wilson, B.; Dincer, S.; Kim, I. W.; Oren, E. E.; Evans, J. S.; Tamerler, C.; Sarikaya, M. Adsorption behavior of linear and cyclic genetically engineered platinum binding peptides Langmuir 2007, 23, 7895-7900
28. BIAtechnology Handbook; Biacore AB: Uppsala, Sweden, 1998; pp 4-1 - 4-4.
29. Raut, V. P.; Agashe, M. A.; Stuart, S. J.; Latour, R. A. Molecular dynamics simulations of peptide-surface interactions Langmuir 2005, 21, 1629-1639
30. Ebner, A.; Hinterdorfer, P.; Gruber, H. J. Comparison of different aminofunctionalization strategies for attachment of single antibodies to AFM cantilevers Ultramicroscopy 2007, 107, 922-927
31. Hinterdorfer, P.; Baumgartner, W.; Gruber, H. J.; Schilcher, K.; Schindler, H. Detection and localization of individual antibody-antigen recognition events by atomic force microscopy Proc. Natl. Acad. Sci. U.S.A. 1996, 93, 3477-3481
32. Kopycinska-Müller, M.; Geiss, R. H.; Hurley, D. C. Contact mechanics and tip shape in AFM-based nanomechanical measurements Ultramicroscopy 2006, 106, 466-474
33. Bulletin of Statistics on World Trade in Engineering Products; United Nations: New York, 1966; p v.
34. Sigal, G. B.; Mrksich, M.; Whitesides, G. M. Effect of surface wettability on the adsorption of proteins and detergents J. Am. Chem. Soc. 1998, 120, 3464-3473
35. Silin, V. V.; Weetall, H.; Vanderah, D. J. SPR studies of the nonspecific adsorption kinetics of human IgG and BSA on gold surfaces modified by self-assembled monolayers (SAMs) J. Colloid Interface Sci. 1997, 185, 94-103
36. Siegel, R. R.; Harder, P.; Dahint, R.; Grunze, M.; Josse, F.; Mrksich, M.; Whitesides, G. M. On-line detection of nonspecific protein adsorption at artificial surfaces Anal. Chem. 1997, 69, 3321-3328
37. Mark, S. S.; Sandhyarani, N.; Zhu, C.; Campagnolo, C.; Batt, C. A. Dendrimer-functionalized self-assembled monolayers as a surface plasmon resonance sensor surface Langmuir 2004, 20, 6808-6817
38. Toworfe, G. K.; Composto, R. J.; Shapiro, I. M.; Ducheyne, P. Nucleation and growth of calcium phosphate on amine-, carboxyl- and hydroxyl-silane self-assembled monolayers Biomaterials 2006, 27, 631-642
39. Dubois, L. H.; Nuzzo, R. G. Synthesis, structure, and properties of model organic surfaces Annu. Rev. Phys. Chem. 1992, 43, 437-463
40. Tanahashi, M.; Matsuda, T. Surface functional group dependence on apatite formation on self-assembled monolayers in a simulated body fluid J. Biomed. Mater. Res. 1997, 34, 305-315
41. Sethuraman, A.; Han, M.; Kane, R. S.; Belfort, G. Effect of surface wettability on the adhesion of proteins Langmuir 2004, 20, 7779-7788
42. Lee, M. S.; Jo, N. J. Coating of methyltriethoxysilane - modified colloidal silica on polymer substrates for abrasion resistance J. Sol-Gel Sci. Technol. 2002, 24, 175-180
43. Tanglumlert, W.; Prasassarakich, P.; Supaphol, P.; Wongkasemjit, S. Hard-coating materials for poly(methyl methacrylate) from glycidoxypropyltrimethoxysilane-modified silatrane via a sol-gel process Surf. Coat. Technol. 2006, 200, 2784-2790
44. Serra, J.; González, P.; Liste, S.; Serra, C.; Chiussi, S.; León, B.; Pérez-Amor, M.; Ylänen, H. O.; Hupa, M. FTIR and XPS studies of bioactive silica based glasses J. Non-Cryst. Solids 2003, 332, 20-27
45. Winkelmann, M.; Gold, J.; Hauert, R.; Kasemo, B.; Spencer, N. D.; Brunette, D. M.; Textor, M. Chemically patterned, metal oxide based surfaces produced by photolithographic techniques for studying protein- and cell-surface interactions. I: Microfabrication and surface characterization Biomaterials 2003, 24, 1133-1145
46. Wolfenden, R.; Andersson, L.; Cullis, P. M.; Southgate, C. C. B. Affinities of amino acid side chains for solvent water Biochemistry 1981, 20, 849-855
47. Kyte, J.; Doolittle, R. F. A simple method for displaying the hydropathic character of a protein J. Mol. Biol. 1982, 157, 105-132
48. Wiggins, P. M. Hydrophobic hydration, hydrophobic forces and protein folding Physica A 1997, 238, 113-128
49. Tsai, Y. S.; Lin, F. Y.; Chen, W. Y.; Lin, C. C. Isothermal titration microcalorimetric studies of the effect of salt concentrations in the interaction between proteins and hydrophobic adsorbents Colloids Surf., A 2002, 197, 111-118
50. Perkins, T. W.; Mak, D. S.; Root, T. W.; Lightfoot, E. N. Protein retention in hydrophobic interaction chromatography: modeling variation with buffer ionic strength and column hydrophobicity J. Chromatogr., A 1997, 766, 1-14
51. Fears, K. P.; Creager, S. E.; Latour, R. A. Determination of the surface pK of carboxylic- and amine-terminated alkanethiols using surface plasmon resonance spectroscopy Langmuir 2008, 24, 837-843
52. Allen, T. T. Introduction to Engineering Statistics and Six Sigma: Statistical Quality Control and Design of Experiments and Systems, 1 st ed.; Springer: London, 2006; p xxii.
53. Montgomery, D. C.; Runger, G. C.; Hubele, N. F. Engineering Statistics, 4 th ed.; John Wiley: Hoboken, NJ, 2007; p xxiii.
54. Giannotti, M. I.; Vancso, G. J. Interrogation of single synthetic polymer chains and polysaccharides by AFM-based force spectroscopy Chemphyschem 2007, 8, 2290-2307
55. Hodges, C. S. Measuring forces with the AFM: polymeric surfaces in liquids Adv. Colloid Interface Sci. 2002, 99, 13-75
56. Saitta, A. M.; Klein, M. L. First-principles study of bond rupture of entangled polymer chains J. Phys. Chem. B 2000, 104, 2197-2200
57. Huang, H.-M.; Chen, W.-Y.; Ruaan, R.-C. Microcalorimetric studies of the mechanism of interaction between designed peptides and hydrophobic adsorbents J. Colloid Interface Sci. 2003, 263, 23-28
58. Geisler, M.; Balzer, B. N.; Hugel, T. Polymer adhesion at the solid-liquid interface probed by a single-molecule force sensor Small 2009, 5, 2864-2869
59. Zangi, R.; Berne, B. J. Aggregation and dispersion of small hydrophobic particles in aqueous electrolyte solutions J. Phys. Chem. B 2006, 110, 22736-22741
60. Lori, J. A.; Hanawa, T. Characterization of adsorption of glycine on gold and titanium electrodes using electrochemical quartz crystal microbalance Corros. Sci. 2001, 43, 2111-2120
61. 2 glasses as determined by titration of soot particles J. Non-Cryst. Solids 2000, 277, 1-9