Integrated molecular and morphological biogeography of the calanoid copepod family Eucalanidae

Deep-Sea Research Part II: Topical Studies in Oceanography

Volumn 57, Issue 24-26, 2010, Pages 2110-2129

  Goetze, Erica ^a   Ohman, Mark D ^b  

^a UNIVERSITY OF HAWAII   (United States)

^b INTEGRATIVE OCEANOGRAPHY DIVISION   (United States)

Author keywords

Cryptic species; Mitochondrial 16S rRNA; Nuclear internal transcribed spacer 2; Pelagic biogeography; Phylogeography

Indexed keywords

16S RRNA; CRYPTIC SPECIES; INTERNAL TRANSCRIBED SPACERS; PELAGIC BIOGEOGRAPHY; PHYLOGEOGRAPHY;

ECOSYSTEMS; MITOCHONDRIA; RNA; TRANSCRIPTION;

OCEANOGRAPHY;

BIOLOGICAL SURVEY; CRUSTACEAN; CRYPSIS; DIVERGENCE; GEOGRAPHICAL DISTRIBUTION; MOLECULAR ANALYSIS; MORPHOLOGY; PELAGIC ECOSYSTEM; PHYLOGENETICS; PHYLOGEOGRAPHY; SPECIES DIVERSITY; TAXONOMY; ZOOGEOGRAPHY; ZOOPLANKTON;

ATLANTIC OCEAN; INDIAN OCEAN; PACIFIC OCEAN;

CALANOIDA; COPEPODA; EUCALANIDAE; PAREUCALANUS; PAREUCALANUS ATTENUATUS; PAREUCALANUS LANGAE; PAREUCALANUS PARKI; PAREUCALANUS SEWELLI; RHINCALANUS; RHINCALANUS NASUTUS; RHINCALANUS ROSTRIFRONS; SUBEUCALANUS; SUBEUCALANUS CRASSUS; SUBEUCALANUS MUCRONATUS; SUBEUCALANUS PILEATUS; SUBEUCALANUS SUBCRASSUS; SUBEUCALANUS SUBTENUIS;

EID: 78650177798     PISSN: 09670645     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.dsr2.2010.09.014     Document Type: Article

References (52)

1. Bradford-Grieve JM The marine fauna of New Zealand: pelagic calanoid Copepoda: Megacalanidae, Calanidae, Paracalanidae, Mecynoceridae, Eucalanidae, Spinocalanidae, Clausocalanidae. New Zealand Oceanographic Institute Memoir, 1994, 102:1-160.
2. Braga E, Zardoya R, Meyer A, Yen J Mitochondrial and nuclear rRNA based copepod phylogeny with emphasis on the Euchaetidae (Calanoida). Marine Biology (Berlin) 1999, 133:79-90.
3. Carl J Copepodes d'Amboines. Revue Suisse de Zoologie 1907, 15:7-18. (pl 11).
4. Castresana J Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular Biology and Evolution 2000, 17:540-552.
5. Chen Y-Q (1986) The vertical distribution of some pelagic copepods in the Eastern Tropical Pacific. CalCOFI Rep XXVII:205-227.
6. Clement M, Posada D, Crandall KA TCS: a computer program to estimate gene geneologies. Molecular Ecology 2000, 9:1657-1660.
7. Cleve PT Plankton from the Indian Ocean and Malay Archipelago. K svenska Vetensk Akad Handl 1901, 35:58.
8. Dana J D Crustacea. Part II. United States Exploring Expedition During the Years 1838, 1839, 1840, 1841, 1842 Under the Command of Charles Wilkes, U. S. N. 1852, 13(2):689-1618. folio atlas pls. 1-96 (1855).
9. Darling KF, Kucera M, Pudsey CJ, Wade CM Molecular evidence links cryptic diversification in polar planktonic protists to Quaternary climate dynamics. Proc Natl Acad Sci 2004, 101:7657-7662.
10. De Decker AHB Near-surface copepod distribution in the South-Western Indian Ocean and the South-Eastern Atlantic Ocean. Ann S Afr Mus 1984, 93:303-370.
11. de Vargas C, Bonzon M, Rees NW, Pawlowski J, Zaninetti L A molecular approach to biodiversity and biogeography in the planktonic foraminifer Globigerinella siphonifera (d/Orbigny). Marine Micropaleontology 2002, 45:101-116.
12. de Vargas C, Norris R, Zaninetti L, Gibb SW, Pawlowski J Molecular evidence of cryptic speciation in planktonic foraminifers and their relation to oceanic provinces. P Natl Acad Sci USA 1999, 96:2864-2868.
13. de Vargas C, Saez AG, Medlin LK, Thierstein HR Super-species in the calcareous plankton. Coccolithophores: from molecular processes to global impact 2004, 271-298. Springer. H.R. Theirstein, J.R. Young (Eds.).
14. Farran GP (1929) Crustacea, Pt 10. Copepoda. British Antarctic ('Terra Nova') Expedition, 1910 Natural History Reports, Zoology:203-306.
15. Fleminger A Distributional atlas of calanoid copepods in the California Current region, Part II. California Cooperative Oceanic Fisheries Investigations, Atlas No 1967, 7:1-213.
16. Fleminger A Pattern, number, variability, and taxonomic significance of integumental organs (sensilla and glandular pores) in the genus Eucalanus (Copepoda, Calanoida). Fishery Bulletin 1973, 71:965-1010.
17. Giesbrecht W. Elenco dei Copepodi pelagici raccolti dal Tenente di vascello Gaetano Chierchia durante il viaggio della R. Corvetta 'Vettor Pisani' negli anni 1882-1885 e dal Tenente di vascello Francesco Orsini nel Mar Rosso, nel 1884. Atti della Accademia Nazionale dei Lincei, Rendiconti dell' Classe di Scienze Fisiche Matematiche e Naturali. (4)4 sem 1888, 2(284-287):330-338.
18. Giesbrecht W. Systematik und Faunistik der pelagischen Copepoden des Golfes von Neapel und der angrezenden Meeres-Abschnitte. Fauna und Flora des Golfes von Neapel und der angrenzenden Meeresabschnitte 1893, 19:1-831. pls 1-54.
19. Goetze E Cryptic speciation on the high seas; global phylogenetics of the copepod family Eucalanidae. Proc R Soc Lond B 2003, 270:2321-2331.
20. Goetze E Global population genetic structure and biogeography of the oceanic copepods, Eucalanus hyalinus and E. spinifer. Evolution 2005, 59:2378-2398.
21. Goetze E Species discovery in marine planktonic invertebrates through global molecular screening. Molecular Ecology 2010, 19, 952-967.
22. Goetze E, Bradford-Grieve J Genetic and morphological description of Eucalanus spinifer T. Scott 1894 (Copepoda: Calanoida), a circumglobal sister species of E. hyalinus s. s. (Claus 1866). Progress in Oceanography 2005, 65:55-87.
23. Grice GD Calanoid copepods from equatorial waters of the Pacific Ocean. Fishery Bulletin 186 61 1962, 172-246.
24. Johnson MW The developmental stages of the copepod Eucalanus elongatus Dana Var. bungii Giesbrecht. Trans Am Micr Soc 1937, 54:79-98.
25. Lang BT The taxonomic problem of Eucalanus elongatus Dana. Ann Fac Sci Saigon 1967, 93-102.
26. Lang BT Taxonomic review and geographical survey of the copepod genera Eucalanus and Rhincalanus in the Pacific Ocean 1965, PhD., University of California, San Diego.
27. Lee CE, Frost BW Morphological stasis in the Eurytemora affinis species complex (Copepoda: Temoridae). Hydrobiologia 2002, 480:111-128.
28. Maddison DR, Maddison WP MacClade 4.0: Analysis of phylogeny and character evolution 2000, Sinauer Associates, Sunderland, MA.
29. Marukawa H Plankton list and some new species of Copepoda from northern waters of Japan. Bull Inst Oceanogr Monaco 1921, 384:1-15. (14 pls).
30. McGowan JA Oceanic biogeography of the Pacific. The Micropaleontology of the Oceans 1971, 3-74. Cambridge University Press. B.M. Funnell, W.R. Riedel (Eds.).
31. Miller CB Biological Oceanography 2004, Blackwell Science Ltd, Malden, MA.
32. Mori T (1937) Pelagic copepods from the neighboring waters of Japan, Tokyo, 150 pp.
33. Nei M Molecular Evolutionary Genetics 1987, Columbia University Press, New York.
34. Pawlowich R (2006) M_Map Mapping Package for Matlab.
35. Prusova IY Pareucalanus smithae sp. nov. (Copepoda: Eucalanidae), a new copepod species from the Arabian Sea. Marine Ecological Journal 2007, 6:61-65.
36. Prusova IY, Al-Yamani F, Al-Mutairi H Subeucalanus flemingeri sp. n. from the Arabian Gulf (Copepoda: Eucalanidae). Zoosystematica Rossica 2001, 10:47-54.
37. Reid JL, Brinton E, Fleminger A, Venrick EL, McGowan JA Ocean Circulation and Marine Life. Advances in Oceanography 1978, 65-130. Plenum Press, New York. H. Charnock, G. Deacon (Eds.).
38. Schmaus PH, Lehnhofer K Copepoda (4): Rhincalanus Dana der Deutschen Tiefsee Expedition. Systematik und Verbreitung der Gattung. Wissenschaftliche Ergebnisse der Deutschen Tiefsee-Expedition auf em Dampfer "Valdivia" 1898-1899 1927, 23:355-400.
39. Schneider S, Roessli D, Excoffier L Arlequin ver 2.000: A software for population genetics data analysis. Genetics and Biometry Laboratory 2000, University of Geneva, Geneva, Switzerland.
40. Scott A Copepoda of the Siboga Expedition. Part I. Free-swimming, littoral, and semi-littoral Copepods. Siboga Exped Mon 1909, XXIX a:323. 369 pls.
41. Sewell RBS, British Museum (Natural History) (1947) The free-swimming planktonic Copepoda: systematic account. Printed by order of the Trustees of the British Museum, London.
42. Smith SL The Arabian Sea: mesozooplankton response to seasonal climate in a tropical ocean. ICES Journal of Marine Science 1995, 52:427-438.
43. Smith SL, Roman M, Prusova I, Wishner K, Gowing M, Codispoti LA, Barber R, Marra J, Flagg C Seasonal response of zooplankton to monsoonal reversals in the Arabian Sea. Deep-Sea Research II 1998, 45:2369-2403.
44. * and other methods) 2002, Sinauer Associates, Sunderland, MA.
45. Tamura K, Dudley J, Nei M, Kumar S MEGA 4: Molecular Evolutionary Genetics Analysis software version 4.0. Molecular Biology and Evolution 2007, 24:1596-1599.
46. Tanaka O The pelagic copepods of the Izu region, middle Japan. Systematic account. I. Families Calanidae and Eucalanidae. Publications of the Seto Marine Biological Laboratory 1956, 5:251-272.
47. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 1997, 25:4876-4882.
48. van der Spoel S, Heyman RP A Comparative Atlas of Zooplankton: Biological Patterns in the Oceans 1983, Springer-Verlag.
49. Vervoort W Biological results of the Snellius Expedition XV. The Bathypelagic Copepoda Calanoida of the Snellius Expedition I. Families Calanidae, Eucalanidae, Paracalanidae, and Pseudocalanidae. Temminckia: a Journal of Systematic Zoology 1949, VIII:1-181.
50. Vervoort W Pelagic Copepoda, Part I. Copepoda Calanoida of the Families Calanidae up to and including Euchaetidae. Atlantide Report 1963, 88-102.
51. Wilson CB Contributions to the Biology of the Philippine Archipelago and adjacent regions. Copepods gathered by the United States fisheries steamer "Albatross" from 1887-1909, chiefly in the Pacific Ocean. United States National Museum, Bulletin 1950, 100(14):141-441. Part 4.
52. Wolfenden RN Notes on the collection of Copepoda. The fauna and geography of the Maldive and Laccadive Archipelagoes 1905, 2:989-1040. (pls 1096-1100).