Zygotic resetting of the HISTONE 3 variant repertoire participates in epigenetic reprogramming in arabidopsis

Current Biology

Volumn 20, Issue 23, 2010, Pages 2137-2143

  Ingouff, Mathieu ^a   Rademacher, Svenja ^b   Holec, Sarah ^a   Šoljić, Lucija ^b   Xin, Nie ^a   Readshaw, Anne ^a   Foo, Shi Hui ^a   Lahouze, Benoît ^a   Sprunck, Stefanie ^b   Berger, Frédéric ^a  

^a NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

^b UNIVERSITY OF REGENSBURG   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS PROTEIN; HISTONE;

ARABIDOPSIS; ARTICLE; CYTOLOGY; FERTILIZATION; GENETIC EPIGENESIS; GENETICS; METABOLISM; PLANT GENOME; ZYGOTE;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; EPIGENESIS, GENETIC; FERTILIZATION; GENOME, PLANT; HISTONES; ZYGOTE;

ANIMALIA; ARABIDOPSIS; EUKARYOTA;

EID: 78650170188     PISSN: 09609822     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cub.2010.11.012     Document Type: Article

References (44)

1. A.D. Goldberg, L.A. Banaszynski, K.M. Noh, P.W. Lewis, S.J. Elsaesser, S. Stadler, S. Dewell, M. Law, X. Guo, and X. Li Distinct factors control histone variant H3.3 localization at specific genomic regions Cell 140 2010 678 691
2. S. Henikoff, and K. Ahmad Assembly of variant histones into chromatin Annu. Rev. Cell Dev. Biol. 21 2005 133 153
3. A. Loyola, and G. Almouzni Marking histone H3 variants: How, when and why? Trends Biochem. Sci. 32 2007 425 433
4. M. Hemberger, W. Dean, and W. Reik Epigenetic dynamics of stem cells and cell lineage commitment: Digging Waddington's canal Nat. Rev. Mol. Cell Biol. 10 2009 526 537
5. H. Saze Epigenetic memory transmission through mitosis and meiosis in plants Semin. Cell Dev. Biol. 19 2008 527 536
6. S.B. Hake, and C.D. Allis Histone H3 variants and their potential role in indexing mammalian genomes: The "H3 barcode hypothesis" Proc. Natl. Acad. Sci. USA 103 2006 6428 6435
7. M. Ingouff, and F. Berger Histone3 variants in plants Chromosoma 119 2010 27 33
8. T. Okada, M. Endo, M.B. Singh, and P.L. Bhalla Analysis of the histone H3 gene family in Arabidopsis and identification of the male-gamete-specific variant AtMGH3 Plant J. 44 2005 557 568
9. P.B. Talbert, R. Masuelli, A.P. Tyagi, L. Comai, and S. Henikoff Centromeric localization and adaptive evolution of an Arabidopsis histone H3 variant Plant Cell 14 2002 1053 1066
10. A. Corpet, and G. Almouzni Making copies of chromatin: The challenge of nucleosomal organization and epigenetic information Trends Cell Biol. 19 2009 29 41
11. P. Fransz, J.H. De Jong, M. Lysak, M.R. Castiglione, and I. Schubert Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate Proc. Natl. Acad. Sci. USA 99 2002 14584 14589
12. M. Ingouff, Y. Hamamura, M. Gourgues, T. Higashiyama, and F. Berger Distinct dynamics of HISTONE3 variants between the two fertilization products in plants Curr. Biol. 17 2007 1032 1037
13. M. Gebert, T. Dresselhaus, and S. Sprunck F-actin organization and pollen tube tip growth in Arabidopsis are dependent on the gametophyte-specific Armadillo repeat protein ARO1 Plant Cell 20 2008 2798 2814
14. F. Berger, Y. Hamamura, M. Ingouff, and T. Higashiyama Double fertilization - caught in the act Trends Plant Sci. 13 2008 437 443
15. D. Schümperli Cell-cycle regulation of histone gene expression Cell 45 1986 471 472
16. A. Durbarry, I. Vizir, and D. Twell Male germ line development in Arabidopsis. duo pollen mutants reveal gametophytic regulators of generative cell cycle progression Plant Physiol. 137 2005 297 307
17. H.Q. Tian, T. Yuan, and S.D. Russell Relationship between double fertilization and the cell cycle in male and female gametes of tobacco Sex. Plant Reprod. 17 2005 243 252
18. S.J. Aw, Y. Hamamura, Z. Chen, A. Schnittger, and F. Berger Sperm entry is sufficient to trigger division of the central cell but the paternal genome is required for endosperm development in Arabidopsis Development 137 2010 2683 2690
19. S.L. Ooi, J.R. Priess, and S. Henikoff Histone H3.3 variant dynamics in the germline of Caenorhabditis elegans PLoS Genet. 2 2006 e97
20. I. Hammoud, D.M. Gomes, M. Bergere, R. Wainer, J. Selva, and F. Vialard Sperm chromosome analysis of an infertile patient with a 95% mosaic r(21) karyotype and normal phenotype Fertil. Steril. 91 2009 930.e13 930.e15
21. G.W. van der Heijden, A.A. Derijck, E. Pósfai, M. Giele, P. Pelczar, L. Ramos, D.G. Wansink, J. van der Vlag, A.H. Peters, and P. de Boer Chromosome-wide nucleosome replacement and H3.3 incorporation during mammalian meiotic sex chromosome inactivation Nat. Genet. 39 2007 251 258
22. G.W. van der Heijden, A.A. Derijck, L. Ramos, M. Giele, J. van der Vlag, and P. de Boer Transmission of modified nucleosomes from the mouse male germline to the zygote and subsequent remodeling of paternal chromatin Dev. Biol. 298 2006 458 469
23. M. Bayer, T. Nawy, C. Giglione, M. Galli, T. Meinnel, and W. Lukowitz Paternal control of embryonic patterning in Arabidopsis thaliana Science 323 2009 1485 1488
24. A. Ronceret, J. Gadea-Vacas, J. Guilleminot, F. Lincker, V. Delorme, S. Lahmy, G. Pelletier, M.E. Chabouté, and M. Devic The first zygotic division in Arabidopsis requires de novo transcription of thymidylate kinase Plant J. 53 2008 776 789
25. N.C. Shaner, M.Z. Lin, M.R. McKeown, P.A. Steinbach, K.L. Hazelwood, M.W. Davidson, and R.Y. Tsien Improving the photostability of bright monomeric orange and red fluorescent proteins Nat. Methods 5 2008 545 551
26. R.Y. Tsien The green fluorescent protein Annu. Rev. Biochem. 67 1998 509 544
27. H. Tagami, D. Ray-Gallet, G. Almouzni, and Y. Nakatani Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis Cell 116 2004 51 61 (Pubitemid 38156183)
28. H. Kaya, K.I. Shibahara, K.I. Taoka, M. Iwabuchi, B. Stillman, and T. Araki FASCIATA genes for chromatin assembly factor-1 in Arabidopsis maintain the cellular organization of apical meristems Cell 104 2001 131 142
29. S.E. Wuest, K. Vijverberg, A. Schmidt, M. Weiss, J. Gheyselinck, M. Lohr, F. Wellmer, J. Rahnenführer, C. von Mering, and U. Grossniklaus Arabidopsis female gametophyte gene expression map reveals similarities between plant and animal gametes Curr. Biol. 20 2010 506 512
30. B. Loppin, E. Bonnefoy, C. Anselme, A. Laurenon, T.L. Karr, and P. Couble The histone H3.3 chaperone HIRA is essential for chromatin assembly in the male pronucleus Nature 437 2005 1386 1390
31. A. Santenard, C. Ziegler-Birling, M. Koch, L. Tora, A.J. Bannister, and M.E. Torres-Padilla Heterochromatin formation in the mouse embryo requires critical residues of the histone variant H3.3 Nat. Cell Biol. 12 2010 853 862
32. M.E. Torres-Padilla, A.J. Bannister, P.J. Hurd, T. Kouzarides, and M. Zernicka-Goetz Dynamic distribution of the replacement histone variant H3.3 in the mouse oocyte and preimplantation embryos Int. J. Dev. Biol. 50 2006 455 461
33. A.Y. Konev, M. Tribus, S.Y. Park, V. Podhraski, C.Y. Lim, A.V. Emelyanov, E. Vershilova, V. Pirrotta, J.T. Kadonaga, A. Lusser, and D.V. Fyodorov CHD1 motor protein is required for deposition of histone variant H3.3 into chromatin in vivo Science 317 2007 1087 1090
34. E. Bonnefoy, G.A. Orsi, P. Couble, and B. Loppin The essential role of Drosophila HIRA for de novo assembly of paternal chromatin at fertilization PLoS Genet. 3 2007 1991 2006
35. T.L. Phelps-Durr, J. Thomas, P. Vahab, and M.C. Timmermans Maize rough sheath2 and its Arabidopsis orthologue ASYMMETRIC LEAVES1 interact with HIRA, a predicted histone chaperone, to maintain knox gene silencing and determinacy during organogenesis Plant Cell 17 2005 2886 2898
36. J. Ogas, S. Kaufmann, J. Henderson, and C. Somerville PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in Arabidopsis Proc. Natl. Acad. Sci. USA 96 1999 13839 13844
37. S.L. Ooi, and S. Henikoff Germline histone dynamics and epigenetics Curr. Opin. Cell Biol. 19 2007 257 265
38. S. Sawatsubashi, T. Murata, J. Lim, R. Fujiki, S. Ito, E. Suzuki, M. Tanabe, Y. Zhao, S. Kimura, and S. Fujiyama A histone chaperone, DEK, transcriptionally coactivates a nuclear receptor Genes Dev. 24 2010 159 170
39. T. Jenuwein, and C.D. Allis Translating the histone code Science 293 2001 1074 1080
40. T. Kouzarides Chromatin modifications and their function Cell 128 2007 693 705
41. S. Henikoff, E. McKittrick, and K. Ahmad Epigenetics, histone H3 variants, and the inheritance of chromatin states Cold Spring Harb. Symp. Quant. Biol. 69 2004 235 243
42. B. Nashun, M. Yukawa, H. Liu, T. Akiyama, and F. Aoki Changes in the nuclear deposition of histone H2A variants during pre-implantation development in mice Development 137 2010 3785 3794
43. Y. Fang, and D.L. Spector Centromere positioning and dynamics in living Arabidopsis plants Mol. Biol. Cell 16 2005 5710 5718
44. J.P. Braselton, M.J. Wilkinson, and S.A. Clulow Feulgen staining of intact plant tissues for confocal microscopy Biotech. Histochem. 71 1996 84 87