Hemoglobin depletion from plasma: Considerations for proteomic discovery in Sickle Cell disease and other hemolytic processes

Proteomics - Clinical Applications

Volumn 4, Issue 12, 2010, Pages 926-930

  Williams, Lisa M ^a   Fu, Zongming ^a   Dulloor, Pratima ^a   Yen, Timothy ^a   Barron Casella, Emily ^a   Savage, William ^a   Van Eyk, Jennifer E ^a   Casella, James F ^a   Everett, Allen ^a  

^a JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Biomarkers; Hemoglobin depletion; Plasma proteomics; Sickle Cell disease

Indexed keywords

ALPHA 2 MACROGLOBULIN; APOLIPOPROTEIN B100; HEMOGLOBIN; HUMAN ALBUMIN; L SELECTIN; NICKEL; NITRILOTRIACETIC ACID; THROMBOSPONDIN 1;

AFFINITY CHROMATOGRAPHY; ARTICLE; CHILD; CLINICAL ARTICLE; CONTROLLED STUDY; ENZYME LINKED IMMUNOSORBENT ASSAY; GEL ELECTROPHORESIS; HEMOGLOBIN BLOOD LEVEL; HEMOLYSIS; HUMAN; MASS SPECTROMETRY; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEOMICS; SICKLE CELL ANEMIA;

ADOLESCENT; ANEMIA, SICKLE CELL; BLOOD PROTEINS; CHILD; CHILD, PRESCHOOL; CHROMATOGRAPHY, AFFINITY; HEMOGLOBINS; HEMOLYSIS; HUMANS; NITRILOTRIACETIC ACID; ORGANOMETALLIC COMPOUNDS; PLASMA; PROTEOMICS;

EID: 78649718815     PISSN: 18628346     EISSN: 18628354     Source Type: Journal    
DOI: 10.1002/prca.201000054     Document Type: Article

References (18)

1. Lezcano, N. E., Odo, N., Kutlar, A., Brambilla, D. et al., Regular transfusion lowers plasma free hemoglobin in children with sickle-cell disease at risk for stroke. Stroke 2006, 37, 1424-1426.
2. Levine, J., Weickert, M., Pagratis, M., Etter, J. et al., Identification of a nickel(II) binding site on hemoglobin which confers susceptibility to oxidative deamination and intramolecular cross-linking. J. Biol. Chem. 1998, 273, 13037-13046.
3. Ringrose, J. H., van Solinge, W. W., Mohammed, S., O'Flaherty, M. C. et al., Highly efficient depletion strategy for the two most abundant erythrocyte soluble proteins improves proteome coverage dramatically. J. Proteome Res. 2008, 7, 3060-3063.
4. Casella, J. F., King, A. A., Barton, B., White, D. A. et al., Design of the silent cerebral infarct transfusion (SIT) trial. Pediatr. Hematol. Oncol. 2010, 27, 69-89.
5. Sebastiani, P., Nolan, V. G., Baldwin, C. T., Abad-Grau, M. M. et al., A network model to predict the risk of death in sickle cell disease. Blood 2007, 110, 2727-2735.
6. Laemmli, U. K., Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970, 227, 680-6855.
7. Arrell, D. K., Elliott, S. T., Kane, L. A., Guo, Y. et al., Proteomic analysis of pharmacological preconditioning: novel protein targets converge to mitochondrial metabolism pathways. Circ. Res. 2006, 99, 706-714.
8. Vizcaíno, J. A., Côté, R., Reisinger, F., Foster, J. M. et al., A guide to the proteomics identifications database proteomics data repository. Proteomics 2009, 9, 4276-4283.
9. Porath, J., Olin, B., Immobilized metal ion affinity adsorption and immobilized metal ion affinity chromatography of biomaterials. Serum protein affinities for gel-immobilized iron and nickel ions. Biochemistry 1983, 22, 1621-1630.
10. Bornstein, P., Thrombospondins function as regulators of angiogenesis. J. Cell Commun. Sig. 2009, 3, 189-200.
11. Isenberg, J. S., Hyodo, F., Matsumoto, K., Romeo, M. J. et al., Thrombospondin-1 limits ischemic tissue survival by inhibiting nitric oxide-mediated vascular smooth muscle relaxation. Blood 2007, 109, 1945-1952.
12. Sugihara, K., Sugihara, T., Mohandas, N., Hebbel, R. P., Thrombospondin mediates adherence of CD36+sickle reticulocytes to endothelial cells. Blood 1992, 80, 2634-2642.
13. Bargatze, R. F., Kurk, S., Butcher, E. C., Jutila, M. A., Neutrophils roll on adherent neutrophils bound to cytokine-induced endothelial cells via L-selectin on the rolling cells. J. Exp. Med. 1994, 180, 1785-1792
14. Qian, W. J., Kaleta, D. T., Petritis, B. O., Jiang, H. et al., Enhanced detection of low abundance human plasma proteins using a tandem IgY12-SuperMix immunoaffinity separation strategy. Mol. Cell. Proteomics 2008, 7, 1963-1973.
15. Choi, H., Fermin, D., Nesvizhskii, A. I., Significance analysis of spectral count data in label-free shotgun proteomics. Mol. Cell. Proteomics 2008, 7, 2373-2385.
16. Lundgren, D. H., Hwang, S. I., Wu, L., Han, D. K., Role of spectral counting in quantitative proteomics. Exp. Rev. Proteomics 2010, 7, 39-53.
17. Ross, P. L., Huang, Y. N., Marchese, J. N., Williamson, B. et al., Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol. Cell. Proteomics 2004, 3, 1154-1169.
18. Wu, W. W., Wang, G., Baek, S. J., Shen, R. F., Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF. J. Proteome Res. 2006, 5, 651-658.