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Volumn , Issue , 2007, Pages 439-446

Modeling protein-DNA binding time in stochastic discrete event simulation of biological processes

Author keywords

[No Author keywords available]

Indexed keywords

ARTIFICIAL INTELLIGENCE; BINDING SITES; BIOLOGICAL SYSTEMS; DISCRETE EVENT SIMULATION; DNA; HIGHER ORDER STATISTICS; INFORMATION THEORY; PROTEINS; RANDOM PROCESSES; RATE CONSTANTS; STOCHASTIC MODELS; STOCHASTIC SYSTEMS; UNCERTAINTY ANALYSIS;

EID: 78649641028     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/cibcb.2007.4221254     Document Type: Conference Paper
Times cited : (4)

References (16)
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    • Specificity, free energy and information content in protein-DNA interactions
    • DOI 10.1016/S0968-0004(98)01187-6
    • G. D. Stormo and D. Fields, Specificity, free energy and information content in protein-DNA interactions. Trends Biochem. Sci., 1998, 23: 109-113. (Pubitemid 28175261)
    • (1998) Trends in Biochemical Sciences , vol.23 , Issue.3 , pp. 109-113
    • Stormo, G.D.1    Fields, D.S.2
  • 4
    • 10044223573 scopus 로고    scopus 로고
    • Kinetics of protein-DNA interaction: Facilitated target location in sequence-dependent potential
    • DOI 10.1529/biophysj.104.050765
    • M. Slutsky and L. A. Mirny Kinetics of Protein-DNA Interaction: Facilitated Target Location in Sequence-Dependent Potential. Biophysical Journal., 2004, 87: 4021-4035. (Pubitemid 39602906)
    • (2004) Biophysical Journal , vol.87 , Issue.6 , pp. 4021-4035
    • Slutsky, M.1    Mirny, L.A.2
  • 6
    • 0036578786 scopus 로고    scopus 로고
    • Translating the noise
    • J. Hasty and J. J. Collins. Translating the Noise. Nature, Genet., 2002, 31, 13-14.
    • (2002) Nature, Genet , vol.31 , pp. 13-14
    • Hasty, J.1    Collins, J.J.2
  • 7
    • 33645429016 scopus 로고
    • Exact stochastic simulation of coupled chemical reactions
    • D.T. Gillespie. Exact stochastic simulation of coupled chemical reactions. J. Phys. Chem., 1977, 81(25): 2340-2361.
    • (1977) J. Phys. Chem , vol.81 , Issue.25 , pp. 2340-2361
    • Gillespie, D.T.1
  • 10
    • 0032492834 scopus 로고    scopus 로고
    • Predicting temporal fluctuations in an intracellular signalling pathway
    • DOI 10.1006/jtbi.1997.0651
    • C.J. Morton-Firth and D. Bray. Predicting temporal fluctuations in an intracellular signalling pathway. J. Theor. Biol., 1998, 192: 117-28. (Pubitemid 28254411)
    • (1998) Journal of Theoretical Biology , vol.192 , Issue.1 , pp. 117-128
    • Morton-Firth, C.J.1    Bray, D.2
  • 11
    • 38549140657 scopus 로고    scopus 로고
    • online at
    • Cell Illustrator. online at, http://www.fqspl.com.pl/
    • Cell Illustrator
  • 13
    • 33751108995 scopus 로고    scopus 로고
    • An analytical model to estimate the time taken for cytoplasmic reactions for stochastic simulation of complex biological systems
    • May 10-12, Atlanta, USA
    • P. Ghosh, S. Ghosh, K. Basu, S. Das and S. Daefler. An Analytical Model to Estimate the time taken for Cytoplasmic Reactions for Stochastic Simulation of Complex Biological Systems. 2nd IEEE Granular Computing Conference, May 10-12, 2006, Atlanta, USA.
    • (2006) 2nd IEEE Granular Computing Conference
    • Ghosh, P.1    Ghosh, S.2    Basu, K.3    Das, S.4    Daefler, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.