메뉴 건너뛰기




Volumn , Issue , 2006, Pages 392-399

A stochastic model to estimate the time taken for protein-ligand docking

Author keywords

[No Author keywords available]

Indexed keywords

ARTIFICIAL INTELLIGENCE; BIOCOMMUNICATIONS; BIOINFORMATICS; CLUSTER ANALYSIS; COMPUTER SIMULATION; DOCKING; DYNAMICS; INFORMATION SCIENCE; INTELLIGENT CONTROL; LIGANDS; MATHEMATICAL MODELS; MECHANICS; MOLECULAR DYNAMICS; PROBABILITY DISTRIBUTIONS; QUANTUM THEORY; RANDOM PROCESSES; RANDOM VARIABLES; RATE CONSTANTS; SPEED; STOCHASTIC PROGRAMMING;

EID: 50249102107     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/CIBCB.2006.330963     Document Type: Conference Paper
Times cited : (6)

References (15)
  • 3
    • 33750126634 scopus 로고    scopus 로고
    • S. Ghosh, P. Ghosh, K. Basu, S. Das and S. Daefler. iSimBioSys: A Discrete Event Simulation Platform for 'in silico' Study of Biological Systems Proceedings of 39th IEEE Annual Simulation Symposium, April 2 - 6, 2006, Huntsville, AL.
    • S. Ghosh, P. Ghosh, K. Basu, S. Das and S. Daefler. iSimBioSys: A Discrete Event Simulation Platform for 'in silico' Study of Biological Systems Proceedings of 39th IEEE Annual Simulation Symposium, April 2 - 6, 2006, Huntsville, AL.
  • 4
    • 33751108995 scopus 로고    scopus 로고
    • An Analytical Model to Estimate the time taken for Cytoplasmic Reactions for Stochastic Simulation of Complex Biological Systems
    • May 10-12, Atlanta, USA
    • P. Ghosh, S. Ghosh, K. Basu, S. Das and S. Daefler. An Analytical Model to Estimate the time taken for Cytoplasmic Reactions for Stochastic Simulation of Complex Biological Systems. Proceedings of the 2nd IEEE Granular Computing Conference, May 10-12, 2006, Atlanta, USA.
    • (2006) Proceedings of the 2nd IEEE Granular Computing Conference
    • Ghosh, P.1    Ghosh, S.2    Basu, K.3    Das, S.4    Daefler, S.5
  • 5
    • 0036578786 scopus 로고    scopus 로고
    • Translating the Noise
    • J. Hasty and J. J. Collins. Translating the Noise. Nature, Genet., 2002, 31, 13-14.
    • (2002) Nature, Genet , vol.31 , pp. 13-14
    • Hasty, J.1    Collins, J.J.2
  • 6
    • 33645429016 scopus 로고
    • Exact stochastic simulation of coupled chemical reactions
    • D.T. Gillespie. Exact stochastic simulation of coupled chemical reactions. J. Phys. Chem., 1977, 81(25):2340-2361.
    • (1977) J. Phys. Chem , vol.81 , Issue.25 , pp. 2340-2361
    • Gillespie, D.T.1
  • 8
    • 2942514591 scopus 로고    scopus 로고
    • Biochemical Network Stochastic Simulator (BioNets): Software for stochastic modeling of biochemical networks
    • March
    • D. Adalsteinsson, D. McMillen and T. C. Elston. Biochemical Network Stochastic Simulator (BioNets): software for stochastic modeling of biochemical networks. BMC Bioinformatics., March 2004.
    • (2004) BMC Bioinformatics
    • Adalsteinsson, D.1    McMillen, D.2    Elston, T.C.3
  • 9
    • 0034961694 scopus 로고    scopus 로고
    • StochSim: Modeling of stochastic biomolecular processes
    • N. Le Novre and T.S Shimizu. StochSim: modeling of stochastic biomolecular processes. Bioinformatics, 2000, 17: 575-576.
    • (2000) Bioinformatics , vol.17 , pp. 575-576
    • Le Novre, N.1    Shimizu, T.S.2
  • 10
    • 38549140657 scopus 로고    scopus 로고
    • online at
    • Cell Illustrator. online at, http://www.fqspl.com.pl/
    • Cell Illustrator
  • 11
    • 0034049350 scopus 로고    scopus 로고
    • Kinetics of Desolvation-Mediated Protein-Protein Binding
    • C. J. Camacho, S. R. Kimura, C. DeLisi and S. Vajda. Kinetics of Desolvation-Mediated Protein-Protein Binding. Biophysical Journal, 2000, 78, pp. 1094-1105.
    • (2000) Biophysical Journal , vol.78 , pp. 1094-1105
    • Camacho, C.J.1    Kimura, S.R.2    DeLisi, C.3    Vajda, S.4
  • 12
    • 0343732391 scopus 로고
    • Effect of nonspecific forces and finite receptor number on rate constants of ligand-cell-bound-receptor interactions
    • C. DeLisi and F. Wiegel. Effect of nonspecific forces and finite receptor number on rate constants of ligand-cell-bound-receptor interactions. Proc. Natl. Acad. Sci., USA, 1981, 78, pp. 5569-5572.
    • (1981) Proc. Natl. Acad. Sci., USA , vol.78 , pp. 5569-5572
    • DeLisi, C.1    Wiegel, F.2
  • 13
    • 4644311920 scopus 로고    scopus 로고
    • H. Fischer, I. Polikarpov and A. F. Craievich. Average protein density is a molecular-weight-dependent function. Protein Science, 2004, 13:28252828.
    • H. Fischer, I. Polikarpov and A. F. Craievich. Average protein density is a molecular-weight-dependent function. Protein Science, 2004, 13:28252828.
  • 15
    • 50249142818 scopus 로고    scopus 로고
    • online at
    • Nanomedicine, Volume I: Basic Capabilities. online at, http://www.nanomedicine.com/NMI/3.2.5.htm
    • Basic Capabilities


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.