Genetic and comparative genomics mapping reveals that a powdery mildew resistance gene Ml3D232 originating from wild emmer co-segregates with an NBS-LRR analog in common wheat (Triticum aestivum L.)

Theoretical and Applied Genetics

Volumn 121, Issue 8, 2010, Pages 1613-1621

  Zhang, Hongtao ^a   Guan, Haiying ^a   Li, Jingting ^a   Zhu, Jie ^a   Xie, Chaojie ^a   Zhou, Yilin ^b   Duan, Xiayu ^b   Yang, Tsomin ^a   Sun, Qixin ^a   Liu, Zhiyong ^a  

^a CHINA AGRICULTURAL UNIVERSITY   (China)

^b INSTITUTE OF PLANT PROTECTION   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BULKED SEGREGANT ANALYSIS; COMPARATIVE APPROACH; COMPARATIVE GENOMICS; DISEASE-RESISTANCE GENES; DOMINANT GENES; EXPRESSED SEQUENCE TAGS; GENETIC ANALYSIS; GENETIC MAPPING; GENOME SEQUENCES; GENOMIC REGIONS; GERMPLASMS; HEXAPLOID WHEAT; MAP-BASED CLONING; MOLECULAR MARKER; ORYZA SATIVA; POWDERY MILDEW; POWDERY MILDEW RESISTANCE; SEQUENCE-TAGGED-SITE MARKERS; SIMPLE SEQUENCE REPEATS; STS MARKERS; TARGET SITES; TRITICUM TURGIDUM VAR; WHEAT (TRITICUM AESTIVUM L.); WHEAT BREEDING;

CLONING; FORESTRY; FUNGI;

GENES;

MICROSATELLITE DNA;

ARTICLE; ASCOMYCETES; BRACHYPODIUM; CHROMOSOME MAP; CHROMOSOME SEGREGATION; COMPARATIVE STUDY; EXPRESSED SEQUENCE TAG; GENETICS; GENOMICS; IMMUNOLOGY; INNATE IMMUNITY; ISOLATION AND PURIFICATION; METHODOLOGY; MICROBIOLOGY; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; PLANT CHROMOSOME; PLANT DISEASE; PLANT GENE; RICE; SEQUENCE HOMOLOGY; WHEAT;

ASCOMYCOTA; BASE SEQUENCE; BRACHYPODIUM; CHROMOSOME MAPPING; CHROMOSOME SEGREGATION; CHROMOSOMES, PLANT; EXPRESSED SEQUENCE TAGS; GENES, PLANT; GENOMICS; IMMUNITY, INNATE; MICROSATELLITE REPEATS; ORYZA SATIVA; PHYSICAL CHROMOSOME MAPPING; PLANT DISEASES; SEQUENCE HOMOLOGY, NUCLEIC ACID; TRITICUM;

BRACHYPODIUM; BRACHYPODIUM DISTACHYON; ERYSIPHALES; ORYZA SATIVA; TRITICUM AESTIVUM; TRITICUM DICOCCON; TRITICUM TURGIDUM; TRITICUM TURGIDUM SUBSP. DICOCCOIDES;

EID: 78649632050     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-010-1414-6     Document Type: Article

References (44)

1. Bennett FGA (1984) Resistance to powdery mildew in wheat: a review of its use in agriculture and breeding programmes. Plant Pathol 33: 279-300.
2. Blanco A, Gadaleta A, Cenci A, Carluccio AV, Abdelbacki AM, Simeone R (2008) Molecular mapping of the novel powdery mildew resistance gene Pm36 introgressed from Triticum turgidum var. dicoccoides in durum wheat. Theor Appl Genet 117: 135-142.
3. Bossolini E, Wicker T, Knobel PA, Keller B (2007) Comparison of orthologous loci from small grass genomes Brachypodium and rice: implications for wheat genomics and grass genome annotation. Plant J 49: 704-717.
4. Chen X, Luo Y, Xia X, Xia L, Chen X, Ren Z, He Z, Jia J (2005) Chromosomal location of powdery mildew resistance gene Pm16 in wheat using SSR marker analysis. Plant Breed 124: 225-228.
5. Devos KM (2005) Updating the 'Crop Circle'. Curr Opin Plant Biol 8: 155-162.
6. Distelfeld A, Uauy C, Olmos S, Schlatter AR, Dubcovsky J, Fahima T (2004) Microcolinearity between a 2-cM region encompassing the grain protein content locus Gpc-6B1 on wheat chromosome 6B and a 350-kb region on rice chromosome 2. Funct Integr Genom 4: 59-66.
7. Draper J, Mur LA, Jenkins G, Ghosh-Biswas GC, Bablak P, Hasterok R, Routledge AP (2001) Brachypodium distachyon. A new model system for functional genomics in grasses. Plant Physiol 127: 1539-1555.
8. Feuillet C, Travella S, Stein N, Albar L, Nublat A, Keller B (2003) Map-based isolation of the leaf rust disease resistance gene Lr10 from the hexaploid wheat (Triticum aestivum L.) genome. Proc Natl Acad Sci USA 100: 15253-15283.
9. Grama A, Gerechter-Amitai ZK (1974) Inheritance of resistance to stripe rust (Puccinia striiformis) in crosses between wild emmer (Triticum dicoccoides) and cultivated tetraploid and hexaploid wheats II Triticum aestivum. Euphytica 23: 393-398.
10. Guyot R, Yahiaoui N, Feuillet C, Keller B (2004) In silico comparative analysis reveals a mosaic conservation of genes within a novel colinear region in wheat chromosome 1AS and rice chromosome 5S. Funct Integr Genomics 4: 47-58.
11. He R, Chang Z, Yang Z, Yuan Z, Zhan H, Zhang X, Liu J (2009) Inheritance and mapping of powdery mildew resistance gene Pm43 introgressed from Thinopyrum intermedium into wheat. Theor Appl Genet 118: 1173-1180.
12. Hua W, Liu Z, Zhu J, Xie C, Yang T, Zhou Y, Duan X, Sun Q, Liu Z (2009) Identification and genetic mapping of a new recessive powdery mildew resistance gene Pm42 in wheat derived from wild emmer (Triticum turgidum var. dicoccoides). Theor Appl Genet 119: 223-230.
13. Huang X, Röder M (2004) Molecular mapping of powdery mildew resistance genes in wheat: a review. Euphytica 137: 203-223.
14. Huang L, Brooks SA, Li W, Fellers JP, Trick HN, Gill BS (2003) Map-based cloning of leaf rust resistance gene Lr21 from the large and polyploid genome of bread wheat. Genetics 164: 655-664.
15. Ji XL, Xie CJ, Ni ZF, Yang TM, Nevo E, Fahima T, Liu ZY, Sun QX (2007) Identification and genetic mapping of a powdery mildew resistance gene in wild emmer (Triticum dicoccoides) accession IW72 from Israel. Euphytica 159: 385-390.
16. Keller B, Feuillet C, Yahiaoui N (2005) Map-based isolation of disease resistance genes from bread wheat: cloning in a supersize genome. Genet Res Camb 85: 93-100.
17. Li GQ, Fang TL, Xie CJ, Yang TM, Nevo E, Fahima T, Sun QX, Liu ZY (2008) Molecular characterization of a new powdery mildew resistance gene Pm41 on chromosome 3BL derived from wild emmer (Triticum turgidum var. dicoccoides). Theor Appl Genet 119: 531-539.
18. Lincoln S, Daly M, Lander E (1992) Constructing genetic maps with Mapmaker/EXP3. 0 Whitehead Institute Technical Report, 3rd edn. Whitehead Institute, Cambridge.
19. Liu ZY, Sun QX, Ni ZF, Nevo E, Yang TM (2002) Molecular characterization of a novel powdery mildew resistance gene Pm30 in wheat originating from wild emmer. Euphytica 123: 21-29.
20. Luo PG, Luo HY, Chang ZJ, Zhang HY, Zhang M, Ren ZL (2009) Characterization and chromosomal location of Pm40 in common wheat: a new gene for resistance to powdery mildew derived from Elytrigia intermedium. Theor Appl Genet 118: 1059-1064.
21. McIntosh RA, Yamazaki Y, Dubcovsky J et al (2008) Catalogue of gene symbols for wheat. In Appels R, Eastwood R, Lagudah E et al (eds) Proceedings of 11th international wheat genet symposium. Sydney University Press, Sydney, Australia.
22. Michelmore RW, Paran I, Kesseli VR (1991) Identification of markers closely linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proc Natl Acad Sci USA 88: 9828-9832.
23. Mohler V, Zeller FJ, Wenzel G, Hsam SLK (2005) Chromosomal location of genes for resistance to powdery mildew in common wheat (Triticum aestivum L. em Thell.). 9. Gene MlZec1 from the Triticum dicoccoides-derived wheat line Zecoi-1. Euphytica 142: 161-167.
24. Moseman JG, Nevo E, El-Morshidy MA, Zohary D (1984) Resistance of Triticum dicoccoides collected in Isreal to infection with Erysiphe graminis tritici. Euphytica 33: 41-47.
25. Moseman JG, Nevo E, Gerechter-Amitai ZK, El-Morshidy MA, Zohary D (1985) Resistance of Triticum dicoccoides collected in Israel to infection with Puccinia recondita tritici. Crop Sci 25: 262-265.
26. Nevo E, Gerechter-Amitai ZK, Beiles A (1991) Resistance of wild emmer wheat to stem rust: ecological, pathological and allozyme associations. Euphytica 53: 121-130.
27. Nevo E, Korol AB, Beiles A, Fahima T (2002) Evolution of wild emmer and wheat improvement: population genetics, genetic resources, and genome organization of wheat's progenitor, Triticum dicoccoides. Springer, Berlin.
28. Qi LL, Echalier B, Chao S, Lazo GR, Butler GE et al (2004) A chromosome bin map of 16, 000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat. Genetics 168: 701-712.
29. Reader SM, Miller TE (1991) The introduction into bread wheat of a major gene for resistance to powdery mildew from wild emmer wheat. Euphytica 53: 57-60.
30. Röder MS, Korzun V, Wendehake K, Plaschke J, Tixier MH, Leroy P, Ganal MW (1998) A microsatellite map of wheat. Genetics 149: 2007-2023.
31. Rong JK, Millet E, Manisterski J, Feldman M (2000) A new powdery mildew resistance gene: introgression from wild emmer into common wheat and RFLP-based mapping. Euphytica 115: 121-126.
32. Saghai-Maroof MA, Soliman KM, Jorgensen RA, Allard RW (1984) Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal locations and population dynamics. Proc Natl Acad Sci USA 81: 8014-8018.
33. Somers DJ, Isaac P, Edwards K (2004) A high density microsatellite consensus map for bread wheat (Triticum aestivum L). Theor Appl Genet 109: 1105-1114.
34. Sorrells ME, La Rota M, Bermudez-Kandianis CE, Greene RA, Kantety R, Munkvold JD, Miftahudin M, Mahmoud A, Ma X, Gustafson PJ, Qi LL, Echalier B, Gill BS, Matthews DE, Lazo GR, Chao S, Anderson OD, Edwards H, Linkiewicz AM, Dubcovsky J, Akhunov ED, Dvorak J, Zhang D, Nguyen HT, Peng J, Lapitan NL, Gonzalez-Hernandez JL, Anderson JA, Hossain K, Kalavacharla V, Kianian SF, Choi DW, Close TJ, Dilbirligi M, Gill KS, Steber C, Walker-Simmons MK, McGuire PE, Qualset CO (2003) Comparative DNA sequence analysis of wheat and rice genomes. Genome Res 13: 1818-1827.
35. Sourdille P, Singh S, Cadalen T, Brown-Guedira GL, Gay G, Qi L, Gill BS, Dufour P, Murigneux A, Bernard M (2004) Microsatellite-based deletion bin system for the establishment of genetic-physical map relationships in wheat (Triticum aestivum L.). Funct Integr Genomics 4: 12-25.
36. Tanksley SD, Ganal MW, Martin GB (1995) Chromosome landing: a paradigm for map-based cloning in plants with large genomes. Trends Genet 11: 63-68.
37. The International Brachypodium Initiative (2010) Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature 463: 763-768.
38. Turner A, Beales J, Faure S, Dunford RP, Laurie DA (2005) The pseudo-response regulator Ppd-H1 provides adaptation to photoperiod in barley. Science 310: 1031-1034.
39. Uauy C, Distelfeld A, Fahima T, Blechl A, Dubcovsky J (2006) A NAC gene regulating senescence improves grain protein, zinc, and iron content in wheat. Science 314: 1298-1301.
40. Wicker T, Yahiaoui N, Keller B (2007) Contrasting rates of evolution in Pm3 loci from three wheat species and rice. Genetics 177: 1207-1216.
41. Yahiaoui N, Srichumpa P, Dudler R, Keller B (2004) Genome analysis at different ploidy levels allows cloning of the powdery mildew resistance gene Pm3b from hexaploid wheat. Plant J 37: 528-538.
42. Yan L, Loukoianov A, Tranquilli G, Helguera M, Fahima T, Dubcovsky J (2003) Positional cloning of the wheat vernalization gene VRN1. Proc Natl Acad Sci USA 100: 6263-6268.
43. Yan L, Loukoianov A, Blechl A, Tranquilli G, Ramakrishna W, SanMiguel P, Bennetzen JL, Echenique V, Dubcovsky J (2004) The wheat VRN2 gene is a flowering repressor down-regulated by vernalization. Science. 303: 1640-1644.
44. Yan L, Fu D, Li C, Blechl A, Tranquilli G, Bonafede M, Sanchez A, Valarik M, Yasuda S, Dubcovsky J (2006) The wheat and barley vernalization gene VRN3 is an orthologue of FT. Proc Natl Acad Sci USA 103: 19581-19586.