Development of chickpea near-isogenic lines for fusarium wilt

Theoretical and Applied Genetics

Volumn 121, Issue 8, 2010, Pages 1519-1526

  Castro, P ^a   Piston F ^b   Madrid, E ^b   Millan T ^b   Gil, J ^b   Rubio, J ^a  

^a IFAPA CENTRO ALAMEDA DEL OBISPO   (Spain)

^b UNIVERSITY OF CÓRDOBA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

DIFFERENTIAL LINES; DIFFERENTIAL RESPONSE; FUSARIUM OXYSPORUMS; FUSARIUM WILT; GENE CONTROL; GENOMIC REGIONS; LINKAGE GROUPS; MICRO SATELLITE; NEAR ISOGENIC LINES; PHENOTYPIC SCREENING; RECOMBINANT INBRED LINES; RECOMBINATION EVENTS; RESISTANCE GENES;

GENES;

PLANTS (BOTANY);

ALLELE; ARTICLE; CHICKPEA; FUSARIUM; GENETIC MARKER; GENETIC RECOMBINATION; GENETICS; GENOTYPE; IMMUNOLOGY; INBREEDING; INNATE IMMUNITY; METHODOLOGY; MICROBIOLOGY; PHYSIOLOGY; PLANT DISEASE;

ALLELES; CICER; FUSARIUM; GENETIC MARKERS; GENOTYPE; IMMUNITY, INNATE; INBREEDING; PLANT DISEASES; RECOMBINATION, GENETIC;

CICER ARIETINUM; FUSARIUM; FUSARIUM OXYSPORUM; FUSARIUM OXYSPORUM F. SP. CICERIS;

EID: 78649629944     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-010-1407-5     Document Type: Article

References (55)

1. Benko-Iseppon AM, Winter P, Huettel B, Staginnus C, Muehlbauer FJ, Kahl G (2003) Molecular markers closely linked to fusarium resistance genes in chickpea show significant alignments to pathogenesis-related genes located on Arabidopsis chromosomes 1 and 5. Theoret Appl Genet 107: 379-386.
2. Bhatti MA (1990) The effects of inoculum density and environmental factors on wilt and root rot of chickpea (Cicer arietinum L.). Ph. D. Dissertation, Department of Plant Pathology, Washington State University, Pullman.
3. Brouwer DJ, St. Clair DA (2004) Fine mapping of three quantitative trait loci for late blight resistance in tomato using near isogenic lines (NILs) and sub-NILs. Theor Appl Genet 108: 628-638.
4. Cobos MJ, Winter P, Kharrat M, Cubero JI, Gil J, Millan T, Rubio J (2009) Genetic analysis of agronomic traits in a wide cross of chickpea. Field Crops Res 111: 130-136.
5. Fan CC, Xing YZ, Mao HL, Lu TT, Han B, Xu CG, Li XH, Zhang QF (2006) GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein. Theor Appl Genet 112: 1164-1171.
6. FAOSTAT (2009) http://faostat. fao. org. Last update June 2009.
7. Gowda SJM, Radica P, Kadoo NY, Mhase LB, Gupta VS (2009) Molecular mapping of wilt resistance genes in chickpea. Mol Breed 24: 177-183.
8. Graham GI, Wolff DW, Stuber CW (1997) Characterization of a yield quantitative trait locus on chromosome five of maize by fine mapping. Crop Sci 37: 1601-1610.
9. Gumber RK, Kumar J, Haware MP (1995) Inheritance of resistance to fusarium wilt in chickpea. Plant Breed 114: 277-279.
10. Halila MH, Strange RN (1996) Identification of the causal agent of wilt of chickpea in Tunisia as Fusarium oxysporum f. sp. ciceri race 0. Phytopath Medit 35: 67-74.
11. Halila I, Cobos MJ, Rubio J, Millán T, Kharrat M, Marrakchi M, Gil J (2009a) Tagging and mapping a second resistance gene for Fusarium wilt race 0 in chickpea. Eur J Plant Pathol 124: 87-92.
12. Halila I, Rubio J, Millán T, Gil J, Kharrat M, Marrakchi M (2009b) Resistance in chickpea (Cicer arietinum) to Fusarium wilt race 0. Plant Breed. doi: 10. 1111/j. 1439-0523. 2009. 01703. x.
13. Haware MP, Nene YL (1982) Races of Fusarium oxysporum f. sp. ciceri. Plant Dis 66: 809-810.
14. Haware MP, Nene YL, Natarajan M (1996) Survival of Fusarium oxysporum f. sp. ciceri in the soil in the absence of chickpea. Pytopathol Mediterr 35: 9-12.
15. Iruela M, Castro P, Rubio J, Cubero JI, Jacinto C, Millán T, Gil J (2007) Validation of a QTL for resistance to ascochyta blight linked to resistance to fusarium wilt race 5 in chickpea (Cicer arietinum L.). Eur J Plant Pathol 119: 29-37.
16. Jalali BL, Chand H (1992) Chickpea wilt. In: Singh US, Mukhopadhayay AN, Kumar J, Chaube HS (eds) Plant diseases of international importance, vol 1, diseases of cereals and pulses. Prentice Hall, Englewood Cliffs, New York, pp 429-444.
17. Jimenez-Diaz RM, Alcala-Jimenez AR, Hervas A, Trapero-Casas JL (1993) Pathogenic variability and hosts resistance in the Fusarium oxysporum f. sp. ciceris/Cicer arietinum pathosystem. In: Proc Eur semin Fusarium mycotoxins, taxonomy, pathogenicity and host resistance, 3rd Hodowsla Roslin Aklimatyazacja i Nasiennictwo. Plant Breeding and Acclimatization Institute, Radzikov, Poland, pp 87-94.
18. Jiménez-Gasco MM, Pérez-Artés E, Jiménez-Diaz RM (2001) Identification of pathogenic races 0, 1B/C, 5 and 6 of Fusarium oxysporum f. sp. ciceris with random amplified polymorphic DNA (RAPD). Eur J Plant Pathol 107: 237-248.
19. Kelly AG, Alcala-Zimenez AR, Bainbridge BW, Heale JB, Perez-Artes E, Jimenez-Diaz RM (1994) Use of genetic fingergerprinting and random amplified polymorphic DNA to characterize pathotypes of Fusarium oxysporum f. sp. ciceris infecting chickpea. Phytopathology 84: 1293-1298.
20. Koester RP, Sisco PH, Stuber CW (1993) Identification of quantitative trait loci controlling days to flowering and plant height in two near isogenic lines of maize. Crop Sci 33: 1209-1216.
21. Kumar S (1998) Inheritance of resistance to Fusarium wilt (race 2) in chickpea. Plant Breed 117: 139-142.
22. Kumar J, Haware MP (1983) Wilt-resistant Kabuli strains developed at ICRISAT. Int Chickpea Newsl 8: 7-8.
23. Landa BB, Navas-Cortés JA, Hervás A, Jiménez-Díaz RM (2001) Influence of temperature and inoculum density of Fusarium oxysporum f. sp. ciceris on suppression of Fusarium wilt of chickpea by rhizosphere bacteria. Phytopathology 91: 807-816.
24. Li JM, Thomson M, McCouch RS (2004) Fine mapping of a grain weight quantitative trait locus in the pericentromeric region of rice chromosome 3. Genetics 168: 2187-2195.
25. Mackill DJ, Bonman JM (1992) Inheritance of blast resistance in near-isogenic lines of rice. Phytopathology 82: 746-749.
26. Millán T, Clarke HJ, Siddique KHM, Buhariwalla HK, Gaur PM, Kumar J, Gill J, Kahl G, Winter P (2006) Chickpea molecular breeding: new tools and concepts. Euphytica 147: 81-103.
27. Muehlbauer GJ, Staswick PE, Specht JE, Graef GL, Shoemaker RC, Keim P (1991) RFLP mapping using a set of near-isogenic lines in the soybean [Glycine max (L.) Merr]. Theor Appl Genet 81: 189-198.
28. Navas-Cortés JA, Alcalá-Jiménez AR, Hau B, Jiménez-Díaz RM (2000) Influence of inoculum density of races 0 and 5 of Fusarium oxysporum f. sp. ciceris on development of Fusarium wilt in chickpea cultivars. Eur J Plant Pathol 106: 135-146.
29. Nene YL, Haware MP, Reddy NMV, Philps JP, Castro EL, Kotasthane SR, Gupta O, Singh G, Shukia P, Sah RP (1989) Identification of broad based and stable resistance to wilt and root rots in chickpea. Indian Phytopathol 42: 499-505.
30. Paran I, Kesseli R, Michelmore R (1991) Identification of restriction fragment length polymorphism and random amplified polymorphic DNA markers linked to downy mildew resistance genes in lettuce, using near-isogenic lines. Genome 34: 1021-1027.
31. Rajesh PN, Tullu A, Gil J, Gupta VS, Ranjekar PK, Muehlbauer FJ (2002) Identification of an STMS marker for the double-podding gene in chickpea. Theor Appl Genet 105: 604-607.
32. Ratnaparkhe M, Santra DK, Tullu A, Muehlbauer FJ (1998a) Inheritance of inter-simple-sequence-repeat polymorphisms and linkage with a fusarium wilt resistance gene in chickpea. Theor Appl Genet 96: 348-353.
33. Ratnaparkhe MB, Tekeoglu M, Muehlbauer FJ (1998b) Inter-simple-sequence-repeat (ISSR) polymorphisms are useful for finding markers associated with disease resistance gene clusters. Theor Appl Genet 97: 515-519.
34. Rubio J, Moreno MT, Cubero JI, Gil J (1998) Effect of the gene for double-pod in chickpea on yield, yield components and stability of yield. Plant Breed 117: 585-587.
35. Rubio J, Hajj-Moussa E, Kharrat M, Moreno MT, Millan T, Gill J (2003) Two genes and linked RAPD markers involved in resistance to Fusarium oxysporum f. sp. ciceris race 0 in chickpea. Plant Breed 122: 188-191.
36. Sharma KD, Muehlbauer FJ (2005) Genetics mapping of Fusariumoxysporum f. sp. ciceris race-specific resistance genes in chickpea (Cicer arietinum L.). In: Abstract of the International food legume research conference-IV. Indian Agricultural Research Institute, New Delhi, pp 18-22.
37. Sharma KD, Muehlbauer FJ (2007) Fusarium wilt of chickpea: physiological specialization, genetics of resistance and resistance gene tagging. Euphytica 157: 1-14.
38. Sharma KD, Winter P, Kahl G, Muehlbauer FJ (2004) Molecular mapping of Fusariumoxysporum f. sp. ciceris race 3 resistance gene in chickpea. Theor Appl Genet 108: 1243-1248.
39. Sharma KD, Chen W, Muehlbauer FJ (2005) Genetics of chickpea resistance to five races of fusarium wilt and a concise set of race differentials for Fusariumoxysporum f. sp. ciceris. Plant Dis 89: 385-390.
40. Singh H, Kumar J, Smithson JB, Haware MP (1987a) Complementation between genes for resistance to race 1 of Fusarium oxysporum f. sp. ciceri in chickpea. Plant Pathol 36: 539-543.
41. Singh H, Kumar J, Haware MP, Smithson JB (1987b) Genetics of resistance to fusarium wilt in chickpeas. In: Day PR, Jellis GJ (eds) Genetics and plant pathogenesis. Blackwell, Oxford, pp 339-342.
42. Tekeoglu M, Tullu A, Kaiser WJ, Muehlbauer FJ (2000) Inheritance and linkage of two genes that confer resistance to fusarium wilt in chickpea. Crop Sci 40: 1247-1251.
43. Trapero-Casas A, Jimenez-Diaz RM (1985) Fungal wilt and root rot diseases of chickpea in Southern Spain. Phytopathology 37: 197-246.
44. Tuinstra MR, Ejeta G, Goldsbrough PB (1997) Heterogeneous inbred family (HIF) analysis: A method for developing near-isogenic lines that differ at quantitative trait loci. Theor Appl Genet 95: 1005-1011.
45. Tullu A, Muehlbauer FJ, Simon CJ, Mayer MS, Kumar J, Kaiser WJ, Kraft JM (1998) Inheritance and linkage of a gene for resistance to race 4 of fusarium wilt and RAPD markers in chickpea. Euphytica 102: 227-232.
46. Tullu A, Kaiser WJ, Kraft JM, Muehlbauer FJ (1999) A second gene for resistance to race 4 of Fusarium wilt in chickpea and linkage with a RAPD marker. Euphytica 109: 43-50.
47. Upadhyaya HD, Haware MP, Kumar J, Smithson JB (1983a) Resistance to wilt in chickpea. I. Inheritance of late wilting in response to race 1. Euphytica 32: 447-452.
48. Upadhyaya HD, Smithson JB, Haware MP, Kumar J (1983b) Resistance to wilt in chickpea. II. Further evidence for two genes for resistance to race 1. Euphytica 32: 749-755.
49. Winter P, Pfaff T, Udupa SM, Huttel B, Sharma PC, Sahi S, Arreguin-Espinoza R, Weigand F, Muehlbauer FJ, Kahl G (1999) Characterization and mapping of sequence-tagged microsatellite sites in the chickpea (Cicer arietinum L.) genome. Mol General Genet 262: 90-101.
50. Winter P, Benko-Iseppon AM, Huttel B, Ratnaparkhe M, Tullu A, Sonnante G, Pfaff T, Tekeoglu M, Santra D, Sant VJ, Rajesh PN, Kahl G, Muehlbauer FJ (2000) A linkage map of the chickpea (Cicer arietinum L.) genome based on recombinant inbred lines from a C. arietinum x C. reticulatm cross: localization of resistance genes for Fusarium wilt races 4 and 5. Theor Appl Genet 101: 1155-1163.
51. Yamamoto T, Kubiki Y, Lin SY, Sasaki T, Yano M (1998) Fine mapping of quantitative trait loci Hd-1, Hd-2 and Hd-3, controlling heading date of rice, as single Mendelian factors. Theor Appl Genet 97: 37-42.
52. Yamamoto T, Lin H, Sasaki T, Yano M (2000) Identification of heading date quantitative trait locus Hd6 and characterization of its epistatic interactions with Hd2 in rice using advanced backcross progeny. Genetics 154: 885-891.
53. Yu ZH, Mackill DJ, Bonman JM, Tanksley SD (1991) Tagging genes for blast resistance in rice via linkage to RFLP markers. Theor Appl Genet 81: 471-476.
54. Zhang YS, Luo LJ, Xu CG, Zhang QF, Xing YZ (2006) Quantitative trait loci for panicle size, heading date and plant height co-segregating in trait-performance derived near-isogenic lines of rice (Oryza sativa). Theor Appl Genet 113: 361-362.
55. Zhou R, Zhu Z, Kong X, Huo N, Tian Q, Li P, Jin C, Dong Y, Jia J (2005) Development of wheat near-isogenic lines for powdery mildew resistance. Theor Appl Genet 110: 640-648.