Inter-simple-sequence-repeat (ISSR) polymorphisms are useful for finding markers associated with disease resistance gene clusters

Theoretical and Applied Genetics

Volumn 97, Issue 4, 1998, Pages 515-519

  Ratnaparkhe, M B ^a   Tekeoglu, M ^a   Muehlbauer, F J ^a  

^a WASHINGTON STATE UNIVERSITY   (United States)

Author keywords

Disease resistance; Mapping; Microsatellite; Sequence directed approach

Indexed keywords

DISEASE RESISTANCE; FUSARIUM WILT RACE 4; GENE CLUSTER; GENE TAGGING; GENETIC MARKER; INTER SIMPLE SEQUENCE REPEAT POLYMORPHISM; POLYMERASE CHAIN REACTION;

EID: 0031688185     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220050925     Document Type: Article

References (31)

1. Akkaya MS, Bhagwat AA, Cregan PB (1992) Length polymorphisms of simple-sequence repeat DNA in soybean. Genetics 132:1131-1139
2. Arens P, Odinot P, van Heusden AW, Lindhout P, Vosman B (1995) GATA and GACA repeats are not evenly distributed throughout the tomato genome. Genome 38: 84-90
3. Blair MW, McCough SR (1997) Microsatellite and sequence-tagged site markers diagnostic for rice bacterial leaf blight resistance gene xa-5. Theor Appl Genet 95:174-184
4. Broun P, Tanksley SD (1996) Characterization and genetic mapping of simple repeat sequences in tomato genome. Mol Gen Genet 250:39-49
5. Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small amount of fresh leaf tissue. Phytochem Bull 19:11-15
6. Epplen JT (1988) On simple repeated GATA GACA sequences in animal genomes: a critical reappraisal. J Herad 79:409-417
7. Erickson RP, Ross CE, Gorski JL, Stalvey JRD, Drumm MM (1988) BKM sequences from the human X chromosomes contain large clusters of GATA/GACA repeats. Ann Hum Genet 52: 167-176
8. Gupta M, Chyi Y-S, Romero-Severson J, Owen JL (1994) Amplification of DNA markers from evolutionarily diverse genomes using single primers of simple-sequence repeats. Theor Appl Genet 89:998-1006
9. Hulbert SH, Michelmore R (1985) Linkage analysis of genes for resistance to downy mildew (Bremia lactucae Regal) in lettuce (Lactuca sativa L.) Theor Appl Genet 70:520-528
10. Islam MR, Sheperd KW, Mayo GME (1993) Recombination among genes at the L group in flax conferring resistance to rust. Theor Appl Genet 77:540-546
11. Kesseli R, Witsenboer H, Stanghellini M, Vandcrmark G, Michlmore R (1993) Recessive resistance to Plasmopara lactucae-radicis maps by bulked segregant analysis to cluster of dominant disease resistance genes in lettuce. MPMI 6 : 722-728
12. Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174-181
13. Litt M, Luty JA (1989) A hypervariable microsatellite revealed by in vitro amplification of dinueleotide repeat within the cardiac muscle actin gene. Am J Hum Genet 44:397-401
14. Lohnes DG, Wagner RE, Bernard RL (1993) Soybean genes Rj2, Rmd, and Rsp2 in linkage group 19. J Hered 84: 109-111
15. Mayer MS, Tullu A, Simon CJ, Kumar JS, Kraft JM, Kaiser WJ, Muehlbauer FJ (1997) Development of DNA marker for fusarium wilt resistance in chickpea. Crop Sci 37:1625-1629
16. Morgante M, Olivieri AM (1993) PCR-amplified microsatellites as markers in plant genetics. Plant J 3:175-182
17. n simple repeats in the karyotypes of primates and mouse. Hum Genet 85:187-194
18. Ratnaparkhe MB, Santra DK, Tullu A, Muehlbauer FJ (1998) Inheritance of inter-simple-sequence-repeat polymorphisms and linkage with fusarium wilt resistance gene in chickpea. Theor Appl Genet 96:348-353
19. Roder MS, Plaschke J, Konig SU, Borner A, Sorrells ME, Tanksley SD, Ganal MW (1995) Characterization of PCR-amplified microsatellite loci in wheat. Mol Gen Genet 246:327-333
20. Saghai-Maroof MA, Biyashev RB, Yang GP, Zhang Q, Allard RW (1994) Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations and population dynamics. Proc Natl Acad Sci USA 91:5466-5470
21. Sanchez de la Hoz MP, Davila JA, Loarce Y, Ferrer E (1996) Simple sequence repeat primers used in polymerase chain reaction amplification to study genetic diversity in barley. Genome 39:112-117
22. Senior ML, Heun M (1993) Mapping maize microsatellites and polymerase chain reaction confirmation of the targeted repeats using a CT primer. Genome 36:884-889
23. Sheperd KW, Mayo GME (1972) Genes conferring specific plant disease resistance Science 175:375-380
24. Sudupak MA, Bennetzen JL, Hulbert SH (1993) Unequal exchange and meiotic instability of disease resistance genes in the Rpl region of maize. Genetics 133:119-125
25. Tsumura Y, Ohba K, Strauss SH (1996) Diversity and inheritance of inter-simple sequence repeat polymorphisms in Douglas-fir (Pseudotsuga menziesii) and sugi (Cryptomeria japonica). Theor Appl Genet 92:40-45
26. Tullu A (1996) Genctics of fusarium wilt resistance in chickpea. Ph.D thesis, Crop and Soil Sciences Department. Washington State University Pullman, Wash. USA
27. Wang Z, Weber JL, Zhong G, Tanksley SD (1994) Survey of plant short tandem repeats. Theor Appl Genet 88: 1-6
28. Wu K-S, Jones R, Danneberger L. Scolnik PA (1994) Detection of microsatellite polymorphisms without cloning. Nucleic Acids Res 22:3257-3258
29. Wu K-S, Tanksley SD (1993) Abundance, polymorphism and genetic mapping of microsatellites in rice. Mol Gen Genet 241:225-235
30. Yu YG, Saghai Maroof MA, Buss GR (1996) Divergence and allelomorphic relationship of a soybean virus resistance gene based on tightly linked DNA microsatellite and RFLP markers. Theor Appl Genet (1996) 92:64-69
31. Zietkiewicz E, Rafalski A, Labuda D (1994) Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics 20: 176-183