-
1
-
-
33646130830
-
Simple sequence repeats as advantageous mutators in evolution
-
10.1016/j.tig.2006.03.005, 16567018
-
Kashi Y, King D. Simple sequence repeats as advantageous mutators in evolution. Trends in Genetics 2006, 22(5):253-259. 10.1016/j.tig.2006.03.005, 16567018.
-
(2006)
Trends in Genetics
, vol.22
, Issue.5
, pp. 253-259
-
-
Kashi, Y.1
King, D.2
-
2
-
-
1942499339
-
Abundance, Distribution, and Mutation Rates of Homopolymeric Nucleotide Runs in the Genome of Caenorhabditis elegans
-
10.1007/s00239-004-2580-4, 15170261
-
Denver D, Morris K, Kewalramani A, Harris K, Chow A, Estes S, Lynch M, Thomas WK. Abundance, Distribution, and Mutation Rates of Homopolymeric Nucleotide Runs in the Genome of Caenorhabditis elegans. J Mol Evol 2004, 58:584-595. 10.1007/s00239-004-2580-4, 15170261.
-
(2004)
J Mol Evol
, vol.58
, pp. 584-595
-
-
Denver, D.1
Morris, K.2
Kewalramani, A.3
Harris, K.4
Chow, A.5
Estes, S.6
Lynch, M.7
Thomas, W.K.8
-
3
-
-
48249133274
-
A Genome-wide View of the Spectrum of Spontaneous Mutations in Yeast
-
10.1073/pnas.0803466105, 2453693, 18583475
-
Lynch M, Sung W, Morris K, Crown N, Landry C, Dopman E, Dickinson WJ, Okamoto K, Kulkarni S, Thomas WK. A Genome-wide View of the Spectrum of Spontaneous Mutations in Yeast. Proc Natl Acad Sci USA 105(27):9272-7. 10.1073/pnas.0803466105, 2453693, 18583475.
-
Proc Natl Acad Sci USA
, vol.105
, Issue.27
, pp. 9272-9277
-
-
Lynch, M.1
Sung, W.2
Morris, K.3
Crown, N.4
Landry, C.5
Dopman, E.6
Dickinson, W.J.7
Okamoto, K.8
Kulkarni, S.9
Thomas, W.K.10
-
4
-
-
0033858199
-
Microsatellites in different eukaryotic genomes: survey and analysis
-
10.1101/gr.10.7.967, 310925, 10899146
-
Toth G, Gaspari Z, Jurka J. Microsatellites in different eukaryotic genomes: survey and analysis. Genome Res 2000, 10:967-981. 10.1101/gr.10.7.967, 310925, 10899146.
-
(2000)
Genome Res
, vol.10
, pp. 967-981
-
-
Toth, G.1
Gaspari, Z.2
Jurka, J.3
-
5
-
-
0033856853
-
Distribution and abundance of microsatellites in the yeast genome can be explained by a balance between slippage events and point mutations
-
Kruglyak S, Durett R, Schug M, Aquadro CF. Distribution and abundance of microsatellites in the yeast genome can be explained by a balance between slippage events and point mutations. Mol Biol Evol 2000, 17:1210-1219.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 1210-1219
-
-
Kruglyak, S.1
Durett, R.2
Schug, M.3
Aquadro, C.F.4
-
6
-
-
20444362414
-
Mutation Rates, Spectra and Hotspots in Mismatch Repair-Deficient Caenorhabditis elegans
-
Denver D, Feinberg S, Estes S, Thomas WK, Lynch M. Mutation Rates, Spectra and Hotspots in Mismatch Repair-Deficient Caenorhabditis elegans. Genetics 2005, 170:108-113.
-
(2005)
Genetics
, vol.170
, pp. 108-113
-
-
Denver, D.1
Feinberg, S.2
Estes, S.3
Thomas, W.K.4
Lynch, M.5
-
7
-
-
0030897578
-
Microsatellite Instability in Yeast: Dependence on Repeat Unit Size and DNA Mismatch Repair Genes
-
Sia EA, Kokoska R, Dominska M, Greenwell P, Petes T. Microsatellite Instability in Yeast: Dependence on Repeat Unit Size and DNA Mismatch Repair Genes. Mol Cell Bio 1997, 17(5):2851-2858.
-
(1997)
Mol Cell Bio
, vol.17
, Issue.5
, pp. 2851-2858
-
-
Sia, E.A.1
Kokoska, R.2
Dominska, M.3
Greenwell, P.4
Petes, T.5
-
8
-
-
20844442964
-
Variation in efficiency of DNA mismatch repair at different sites in the yeast genome
-
10.1073/pnas.0503415102, 1150857, 15932942
-
Hawk J, Stefanovic L, Boyer J, Petes T, Farber R. Variation in efficiency of DNA mismatch repair at different sites in the yeast genome. Proc Natl Acad Sci USA 2005, 102:8639-8643. 10.1073/pnas.0503415102, 1150857, 15932942.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 8639-8643
-
-
Hawk, J.1
Stefanovic, L.2
Boyer, J.3
Petes, T.4
Farber, R.5
-
9
-
-
0032530155
-
A phylogenomic study of the MutS family of proteins
-
10.1093/nar/26.18.4291, 147835, 9722651
-
Eisen J. A phylogenomic study of the MutS family of proteins. Nucleic Acids Res 1998, 26(18):4291-4300. 10.1093/nar/26.18.4291, 147835, 9722651.
-
(1998)
Nucleic Acids Res
, vol.26
, Issue.18
, pp. 4291-4300
-
-
Eisen, J.1
-
10
-
-
0036893213
-
Base composition of mononucleotide runs affects DNA polymerase slippage and removal of frameshift intermediates by mismatch repair in Saccharomyces cerevisiae
-
Gragg H, Harfe B, Robertson SJ. Base composition of mononucleotide runs affects DNA polymerase slippage and removal of frameshift intermediates by mismatch repair in Saccharomyces cerevisiae. Mol Cell Bio 2002, 22(24):8756-8762.
-
(2002)
Mol Cell Bio
, vol.22
, Issue.24
, pp. 8756-8762
-
-
Gragg, H.1
Harfe, B.2
Robertson, S.J.3
-
11
-
-
0033808899
-
Evolutionary dynamics of microsatellite DNA
-
10.1007/s004120000089, 11072791
-
Schlötterer C. Evolutionary dynamics of microsatellite DNA. Chromosoma 2000, 109:365-371. 10.1007/s004120000089, 11072791.
-
(2000)
Chromosoma
, vol.109
, pp. 365-371
-
-
Schlötterer, C.1
-
12
-
-
0033857247
-
Microsatellite Variability Differs Between Dinucleotide Repeat Motifs-Evidence from Drosophila melanogaster
-
Bachtrog D, Agis M, Imhof M, Schlötterer C. Microsatellite Variability Differs Between Dinucleotide Repeat Motifs-Evidence from Drosophila melanogaster. Mol Biol Evol 2000, 17(9):1227-1285.
-
(2000)
Mol Biol Evol
, vol.17
, Issue.9
, pp. 1227-1285
-
-
Bachtrog, D.1
Agis, M.2
Imhof, M.3
Schlötterer, C.4
-
13
-
-
78650821797
-
WFleaBase
-
wFleaBase. , http://wFleaBase.org/
-
-
-
-
14
-
-
25444495267
-
Homopolymer tract lengths dependent enrichments in functional regions of 27 eukaryotes and their novel dependence on the organism DNA (G+C)% composition
-
10.1186/1471-2164-5-95, 539357, 15598342
-
Zhou Y, Bizzaro J, Marx K. Homopolymer tract lengths dependent enrichments in functional regions of 27 eukaryotes and their novel dependence on the organism DNA (G+C)% composition. BMC Genomics 2004, 5:95. 10.1186/1471-2164-5-95, 539357, 15598342.
-
(2004)
BMC Genomics
, vol.5
, pp. 95
-
-
Zhou, Y.1
Bizzaro, J.2
Marx, K.3
-
15
-
-
46749134571
-
JGI Genome Portal
-
JGI Genome Portal. , http://www.jgi.doe.gov/Daphnia/
-
-
-
-
16
-
-
0030003384
-
Microsatellite spreading in the human genome: Evolutionary mechanisms and structural implications
-
Nadir E, Margalit H, Gallily T, Bensasson SA. Microsatellite spreading in the human genome: Evolutionary mechanisms and structural implications. Proceedings of the National Academy of Sciences 1996, 93:6470-6475.
-
(1996)
Proceedings of the National Academy of Sciences
, vol.93
, pp. 6470-6475
-
-
Nadir, E.1
Margalit, H.2
Gallily, T.3
Bensasson, S.A.4
-
17
-
-
38049048656
-
The genome-wide determinants of human and chimpanzee microsatellite evolution
-
10.1101/gr.7113408, 2134767, 18032720
-
Kelkar YD, Tyekucheva S, Chiaromonte F, Makova KD. The genome-wide determinants of human and chimpanzee microsatellite evolution. Genome Res 2008, 18:30-38. 10.1101/gr.7113408, 2134767, 18032720.
-
(2008)
Genome Res
, vol.18
, pp. 30-38
-
-
Kelkar, Y.D.1
Tyekucheva, S.2
Chiaromonte, F.3
Makova, K.D.4
-
18
-
-
44849095421
-
Genome-wide analysis of microsatellite polymorphism in chicken cirvumventing the ascertainment bias
-
2413155, 18356314
-
Brandstrom M, Ellegren H. Genome-wide analysis of microsatellite polymorphism in chicken cirvumventing the ascertainment bias. Genome research 2008, 2413155, 18356314.
-
(2008)
Genome research
-
-
Brandstrom, M.1
Ellegren, H.2
-
19
-
-
0015765702
-
A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population
-
10.1017/S0016672300012994, 4777279
-
Ohta T, Kimura M. A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population. Genet Res 1973, 22:201-204. 10.1017/S0016672300012994, 4777279.
-
(1973)
Genet Res
, vol.22
, pp. 201-204
-
-
Ohta, T.1
Kimura, M.2
-
20
-
-
0032168989
-
Equilibrium distributions of microsatellite repeat length resulting from a balance between slippage events and point mutations
-
10.1073/pnas.95.18.10774, 27971, 9724780
-
Kruglyak S, Durett R, Schug M, Aquadro CF. Equilibrium distributions of microsatellite repeat length resulting from a balance between slippage events and point mutations. Proc Natl Acad Sci USA 1998, 95:10774-10778. 10.1073/pnas.95.18.10774, 27971, 9724780.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 10774-10778
-
-
Kruglyak, S.1
Durett, R.2
Schug, M.3
Aquadro, C.F.4
-
21
-
-
0347356456
-
The relationship between microsatellite slippage mutation rate and the number of repeat units
-
10.1093/molbev/msg228, 12949124
-
Lai Y, Sun F. The relationship between microsatellite slippage mutation rate and the number of repeat units. Mol Biol Evol 20:2123-2131. 10.1093/molbev/msg228, 12949124.
-
Mol Biol Evol
, vol.20
, pp. 2123-2131
-
-
Lai, Y.1
Sun, F.2
-
22
-
-
0034079715
-
Heterogeneous mutation processes in human microsatellite sequences
-
Ellegren H. Heterogeneous mutation processes in human microsatellite sequences. Nature Genetics 2000, 24:401-402.
-
(2000)
Nature Genetics
, vol.24
, pp. 401-402
-
-
Ellegren, H.1
-
23
-
-
0032063424
-
A Threshold Size for Microsatellite Expansion
-
Rose O, Falush D. A Threshold Size for Microsatellite Expansion. Mol Biol Evol 15(5):613-615.
-
Mol Biol Evol
, vol.15
, Issue.5
, pp. 613-615
-
-
Rose, O.1
Falush, D.2
-
24
-
-
3042782819
-
Microsatellites: Simple sequences with complex evolution
-
Ellegren H. Microsatellites: Simple sequences with complex evolution. Nature Review Genetics 2004, 5:435-444.
-
(2004)
Nature Review Genetics
, vol.5
, pp. 435-444
-
-
Ellegren, H.1
-
25
-
-
0034111151
-
The direction of microsatellite mutations is dependent upon allele length
-
10.1038/74238, 10742105
-
Xu X, Peng M, Fang Z. The direction of microsatellite mutations is dependent upon allele length. Nature Genet 2000, 24:396-399. 10.1038/74238, 10742105.
-
(2000)
Nature Genet
, vol.24
, pp. 396-399
-
-
Xu, X.1
Peng, M.2
Fang, Z.3
-
26
-
-
45849121794
-
The rate and spectrum of microsatellite mutation in Caenorhabditis elegans and Daphnia pulex
-
10.1534/genetics.107.081927, 2323801, 18430937
-
Seyfert A, Cristescu M, Frisse L, Schaack S, Thomas WK, Lynch M. The rate and spectrum of microsatellite mutation in Caenorhabditis elegans and Daphnia pulex. Genetics 2008, 178:2113-2121. 10.1534/genetics.107.081927, 2323801, 18430937.
-
(2008)
Genetics
, vol.178
, pp. 2113-2121
-
-
Seyfert, A.1
Cristescu, M.2
Frisse, L.3
Schaack, S.4
Thomas, W.K.5
Lynch, M.6
-
27
-
-
7344249038
-
Mutation and evolution of microsatellites in Drosophila melanogaster
-
10.1023/A:1017083025154, 9720288
-
Schug M, Hutter C, Noor M, Aquadro C. Mutation and evolution of microsatellites in Drosophila melanogaster. Genetica 1998, 102(103):359-367. 10.1023/A:1017083025154, 9720288.
-
(1998)
Genetica
, vol.102
, Issue.103
, pp. 359-367
-
-
Schug, M.1
Hutter, C.2
Noor, M.3
Aquadro, C.4
-
28
-
-
40549102169
-
High frequency of microsatellites in S. cerevisiae meiotic recombination hotspots
-
10.1186/1471-2164-9-49, 2267716, 18226240
-
Bagshaw A, Pitt J, Gemmell N. High frequency of microsatellites in S. cerevisiae meiotic recombination hotspots. BMC Genomics 2008, 9:49. 10.1186/1471-2164-9-49, 2267716, 18226240.
-
(2008)
BMC Genomics
, vol.9
, pp. 49
-
-
Bagshaw, A.1
Pitt, J.2
Gemmell, N.3
-
29
-
-
33748693687
-
A microsatellite-based genetic linkage map of the waterflea, Daphnia pulex: On the prospect of crustacean genomics
-
10.1016/j.ygeno.2006.03.007, 16624519
-
Cristescu M, Colbourne J, Radivojac J, Lynch M. A microsatellite-based genetic linkage map of the waterflea, Daphnia pulex: On the prospect of crustacean genomics. Genomics 2006, 88:415-430. 10.1016/j.ygeno.2006.03.007, 16624519.
-
(2006)
Genomics
, vol.88
, pp. 415-430
-
-
Cristescu, M.1
Colbourne, J.2
Radivojac, J.3
Lynch, M.4
-
30
-
-
0033756237
-
Microsatellite Variation and Recombination Rate in the Human Genome
-
1461344, 11063702
-
Payseur B, Nachman M. Microsatellite Variation and Recombination Rate in the Human Genome. Genetics 2000, 156:1285-1298. 1461344, 11063702.
-
(2000)
Genetics
, vol.156
, pp. 1285-1298
-
-
Payseur, B.1
Nachman, M.2
-
31
-
-
0035986891
-
Integrating genomics, Bioinformatics, and Classical Genetics to Study the Effects of Recombination on Genome Evolution
-
Birdsell J. Integrating genomics, Bioinformatics, and Classical Genetics to Study the Effects of Recombination on Genome Evolution. Mol Bio Evol 19(7):1181-1197.
-
Mol Bio Evol
, vol.19
, Issue.7
, pp. 1181-1197
-
-
Birdsell, J.1
|