Mapping QTLs for nitrogen-deficiency tolerance at seedling stage in rice (Oryza sativa L.)

Plant Breeding

Volumn 129, Issue 6, 2010, Pages 652-656

  Feng, Y ^a   Cao, L Y ^b   Wu, W M ^b   Shen, X H ^b   Zhan, X D ^b   Zhai, R R ^b   Wang, R C ^b   Chen, D B ^b   Cheng, S H ^b  

^a SHENYANG AGRICULTURAL UNIVERSITY   (China)

^b CHINA NATIONAL RICE RESEARCH INSTITUTE   (China)

Author keywords

Nitrogen deficiency tolerance; Oryza sativa; QTL; Rice; Seedling stage

Indexed keywords

ORYZA SATIVA;

EID: 78649606441     PISSN: 01799541     EISSN: 14390523     Source Type: Journal    
DOI: 10.1111/j.1439-0523.2009.01728.x     Document Type: Article

References (35)

1. Cheng, S. H., J. Y. Zhuang, L. Y. Cao, S. G. Chen, Y. C. Peng, Y. Y. Fan, X. D. Zhan, and K. L. Zheng, 2004: Molecular breeding for super rice in China. Chin. J. Rice. Sci. 18, 377-383 (in Chinese).
2. Cho, Y. I., W. Z. Jiang, J. H. Chin, Z. Z. Piao, Y. G. Cho, S. R. McCouch, and H. J. Koh, 2007: Identification of QTLs associated with physiological nitrogen use efficiency in rice. Mol. Cells 23, 72-79.
3. Churchill, G. A., and R. W. Doerge, 1994: Empirical threshold values for quantitative trait mapping. Genetics 138, 963-971.
4. Coque, M., and A. Gallais, 2006: Genomic regions involved in response to grain yield selection at high and low nitrogen fertilization in maize. Theor. Appl. Genet. 112, 1205-1220.
5. Cregan, P. B., and P. Berkum, 1984: Genetics of nitrogen metabolism and physiological/biochemical selection for increased grain crop productivity. Theor. Appl. Genet. 67, 97-111.
6. De Datta, S. K., and F. E. Broadbent, 1990: Nitrogen-use efficiency of 24 rice genotypes on an N-deficient soil. Field Crop Res. 23, 81-92.
7. Erisman, J. W., and W. Vries, 2000: Nitrogen deposition and effects in European forests. Environ. Rev. 8, 65-93.
8. Fang, P., and P. Wu, 2001: QTL-×-N-level interaction for plant height in rice (Oryza sativa L.). Plant Soil 236, 237-242.
9. Fang, P., X. M. Yu, R. Q. Zhu, and P. Wu, 2004: QTLs for rice leaf chlorophyll content under low N stress. Pedosphere 14, 145-150.
10. Fillery, I. R. P., J. R. Simpson, and S. K. De Datta, 1984: Influence of field environment and fertilizer management on ammonia loss from flooded rice. Soil Sci. Soc. Am. J. 48, 914-920.
11. Frink, C. R., P. E. Waggoner, and J. H. Ausubel, 1999: Nitrogen fertilizer: retrospect and prospect. Proc. Natl Acad. Sci. USA 96, 1175-1180.
12. Hirel, B., P. Bertin, I. Quillere, W. Bourdoncle, C. Attagnant, C. Dellay, A. Gouy, S. Cadiou, C. Retailliau, M. Falque, and A. Gallais, 2001: Towards a better understanding of the genetic and physiological basis for nitrogen use efficiency in maize. Plant Physiol. 125, 1258-1270.
13. Huang, G., K. K. Yi, Y. R. Wu. L. Zhu, C. Z. Mao, and P. Wu, 2004: QTLs for nitrate induced elongation and initiation of lateral roots in rice (Oryza sativa L.). Plant Soil 263, 229-237.
14. Inthapanya, P., P. Sipaseuth, V. Shihavong, M. Sihathep, S. Changphengsay, S. Fukay, and J. Basnayake, 2000: Genotype differences in nutrient uptake and utilization for grain yield production of rained lowland rice under fertilized and non-fertilized conditions. Field Crop Res. 65, 57-68.
15. Jiang, L. G., D. F. Dong, X. Q. Gan, and S. Q. Wei, 2005: Photosynthetic efficiency and nitrogen distribution under different nitrogen management and relationship with physiological N-use efficiency in three rice genotypes. Plant Soil 271, 321-328.
16. Kobayashi, S., Y. Fukuta, H. Takeda, T. Sato, and M. Osaki, 2008: Identification and characterization of genomic regions associated with nitrogen dynamics in rice plants (Oryza sativa L.). Breed. Sci. 58, 113-120.
17. Lawrence, L. R., Q. M. Ketterings, and J. H. Cherney, 2008: Effect of nitrogen application on yield and quality of silage corn after forage legume-grass. Agron. J. 100, 73-79.
18. Lian, X. M., Y. Z. Xing, H. Yan, C. G. Xu, X. H. Li, and Q. F. Zhang, 2005: QTLs for low nitrogen tolerance at seedling stage identified using a recombinant inbred line population derived from an elite rice hybrid. Theor. Appl. Genet. 112, 85-96.
19. Loudet, O., S. Chaillou, P. Merigout, J. Talbotec, and F. Daniel-Vedele, 2003: Quantitative trait loci analysis of nitrogen use efficiency in arabidopsis. Plant Physiol. 131, 345-358.
20. Marschner, H., 1995: Mineral nutrition of higher plants. Academic Press, London.
21. Miller, A. J., and M. D. Cramer, 2004: Root nitrogen acquisition and assimilation. Plant Soil 274, 1-36.
22. Ming, F., X. W. Zheng, G. H. Mi, P. He, L. H. Zhu, and F. S. Zhang, 2000: Identification of quantitative trait loci affecting tolerance to low phosphorus in rice (Oryza sativa L.). Chinese Sci. Bull. 45, 520-524.
23. Ntanos, D. A., and S. D. Koutroubas, 2002: Dry matter and N accumulation and translocation for Indica and Japonica rice under Mediterranean conditions. Field Crop Res. 74, 93-101.
24. Ribaut, J. M., Y. Frachebond, P. Monneveux, M. Banziger, M. Vargas, and C. J. Jiang, 2007: Quantitative trait loci for yield and correlated traits under high and low soil nitrogen conditions in tropical maize. Mol. Breed. 20, 15-29.
25. Senthilvel, S., K. K. Vinod, P. Malarvizhi, and M. Maheswaran, 2008: QTL and QTL-×-environment effects on agronomic and nitrogen acquisition traits in rice. J. Integr. Plant Biol. 50, 1108-1117.
26. Shan, Y. H., Y. L. Wang, and X. B. Pan, 2005: Mapping of QTLs for nitrogen use efficiency and related traits in rice (Oryza sativa L.). Scientia Agricultura Sinica 4, 721-727 (in Chinese).
27. Shen, X. H., 2008: RIL construction and QTL mapping for some traits of super hybrid rice (Oryza sativa L.), XY9308, PhD Dissertation. Chinese Academy of Agricultural Sciences, China.
28. Shen, X. H., S. G. Chen, L. Y. Cao, X. D. Zhan, D. B. Chen, W. M. Wu, and S. H. Cheng, 2008: Construction of genetic linkage map based on a RIL population derived from super hybrid rice, XY9308. Chin. J. Mol. Plant Breed. 6, 861-866 (in Chinese).
29. Tadahiko, M., 1997: Physiological nitrogen efficiency in rice: Nitrogen utilization, photosynthesis, and yield potential. Plant Soil 196, 201-210.
30. Wu, P., and A. C. Luo, 1996: Investigation on genetic background of leaf chlorophyll content variation via molecular markers. J. Genet. Genomics 23, 431-438.
31. Xue, Y. L., and Z. A. Xia, 1982: Paddy rice's solution culture. In: Yinglong Xue (ed.), Handbook of plant physiology experiments, 63-64. Academic Press, Shanghai, China
32. Yamaya, T., M. Obara, H. Nakajima, S. Sasaki, T. Hayakawa, and T. Sato, 2002: Genetic manipulation and quantitative-trait loci mapping for nitrogen recycling in rice. J. Exp. Bot. 53, 917-925.
33. Yang, J., and J. Zhu, 2005: Methods for predicting superior genotypes under multiple environments based on QTL effects. Theor. Appl. Genet. 110, 1268-1274.
34. Zeng, Z. B., 1994: Precision mapping of quantitative trait loci. Genetics 136, 1457-1468.
35. Zhu, Z. L., 2000: Loss of fertilizer N from plant-soil system and the strategies and techniques for its reduction. Soil Environ. Sci. 9, 1-6 (in Chinese).