Light-enhanced catalysis by pyridoxal phosphate-dependent aspartate aminotransferase

Journal of the American Chemical Society

Volumn 132, Issue 47, 2010, Pages 16953-16961

  Hill, Melissa P ^a   Carroll, Elizabeth C ^a   Vang, Mai C ^a   Addington, Trevor A ^a   Toney, Michael D ^a   Larsen, Delmar S ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ABSORPTION BAND; ASPARTATE AMINOTRANSFERASE; ASPARTATES; BLUE LIGHT; CATALYTIC ACTIVITY; FEMTOSECONDS; H-BONDS; INTRINSIC REACTIVITY; KETOGLUTARATE; KINETIC ISOTOPE EFFECTS; PHOTOACTIVATION; PHOTOENHANCEMENT; PLP-DEPENDENT ENZYMES; PYRIDOXAL PHOSPHATES; QUINONOID INTERMEDIATES; RATE ENHANCEMENT; RATE LIMITING; REVERSIBLE INTERCONVERSION; SCHIFF BASIS; SCHIFF-BASE; TIME-RESOLVED SPECTROSCOPY; TRIPLET STATE;

AMINO ACIDS; CATALYSIS; CATALYST ACTIVITY; ENZYMES; EXCITED STATES; ISOTOPES; LASER SPECTROSCOPY; REACTION INTERMEDIATES;

FUNCTIONAL GROUPS;

AMINO ACID; ASPARTATE AMINOTRANSFERASE; PYRIDOXAL 5 PHOSPHATE; SCHIFF BASE;

ABSORPTION; ARTICLE; BLUE LIGHT; CHEMICAL BOND; CHEMICAL REACTION; EXCITATION; ILLUMINATION; IMAGE ENHANCEMENT; PHOTOCATALYSIS; PROTON TRANSPORT; REACTION ANALYSIS; SPECTROSCOPY; STEADY STATE;

ASPARTATE AMINOTRANSFERASES; BIOCATALYSIS; KINETICS; LIGHT; MUTATION; PHOTOCHEMICAL PROCESSES; PROTONS; PYRIDOXAL PHOSPHATE; SCHIFF BASES; SOLUTIONS; TEMPERATURE;

EID: 78649494486     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja107054x     Document Type: Article

References (59)

1. Sancar, A. Chem. Rev. 2003, 103, 2203-2237
2. Heyes, D. J. and Hunter, C. N. Trends. Biochem. Sci. 2005, 30, 642-649
3. Cao, W. X., Ye, X., Sjodin, T., Christian, J. F., Demidov, A. A., Berezhna, S., Wang, W., Barrick, D., Sage, J. T., and Champion, P. M. Biochemistry 2004, 43, 11109-11117
4. Sage, J. T., Morikis, D., and Champion, P. M. Biochemistry 1991, 30, 1227-1237
5. Tian, W. D., Sage, J. T., and Champion, P. M. J. Mol. Biol. 1993, 233, 155-166
6. Walker, L. A., Jarrett, J. T., Anderson, N. A., Pullen, S. H., Matthews, R. G., and Sension, R. J. J. Am. Chem. Soc. 1998, 120, 3597-3603
7. Toney, M. D. Arch. Biochem. Biophys. 2005, 433, 279-287
8. Kallen, R. G., Korpela, T., Martell, A. E., Matsushima, Y., Metzler, C. M., Metzler, D. E., Morozov, Y. V., Ralston, I. M., Savin, F. A., Torchinsky, Y. M., and Ueno, H. In Transaminases; Christian, P. and Metzler, D. E., Eds.; John Wiley and Sons: New York, 1985.
9. Cornish, T. J. and Ledbetter, J. W. IEEE J. Quantum Electron. 1984, 20, 1375-1379
10. Fraikin, G. Y., Strakhovskaya, M. G., Ivanova, E. V., and Rubin, A. B. Photochem. Photobiol. 1989, 49, 475-477
11. Stepuro, I. I., Konovalova, N. V., Solodunov, A. A., and Tyshchenko, A. S. Mol. Biol. 1993, 27, 483-487
12. Jenkins, W. T., Yphantis, D. A., and Sizer, I. W. J. Bio. Chem. 1959, 234, 51-57
13. Toney, M. D. and Kirsch, J. F. Protein Sci. 1992, 1, 107-119
14. Dunathan, H. C. Proc. Natl. Acad. Sci. U. S. A. 1966, 55, 712
15. Kuramitsu, S., Hiromi, K., Hayashi, H., Morino, Y., and Kagamiyama, H. Biochemistry 1990, 29, 5469-5476
16. Goldberg, J. M. and Kirsch, J. F. Biochemistry 1996, 35, 5280-5291
17. Julin, D. A. and Kirsch, J. F. Biochemistry 1989, 28, 3825-3833
18. Hill, M. P., Carroll, E. C., Toney, M. D., and Larsen, D. S. J. Phys. Chem. B 2008, 112, 5867-5873
19. Metzler, C. M., Cahill, A., and Metzler, D. E. J. Am. Chem. Soc. 1980, 102, 6075-6082
20. Smith, D. L., Almo, S. C., Toney, M. D., and Ringe, D. Biochemistry 1989, 28, 8161-8167
21. Toney, M. D. and Kirsch, J. F. Biochemistry 1993, 32, 1471-1479
22. Geck, M. K. and Kirsch, J. F. Biochemistry 1999, 38, 8032-8037
23. Carroll, E. C., Hill, M. P., Madsen, D., Malley, K. R., and Larsen, D. S. Rev. Sci. Instrum. 2009, 80 026102-3
24. Larsen, D. S., van Stokkum, I. H. M., Vengris, M., van der Horst, M. A., de Weerd, F. L., Hellingwerf, K. J., and van Grondelle, R. Biophys. J. 2004, 87, 1858-1872
25. Blandame, M. J. Chem. Rev. 1970, 70, 59
26. Larsen, D. S., Vengris, M., van Stokkum, I. H. M., van der Horst, M. A., de Weerd, F. L., Hellingwerf, K. J., and van Grondelle, R. Biophys. J. 2004, 86, 2538-2550
27. Holzwarth, A. R. In Biophysical Techniques in Photosynthesis; Amesz, J. and Hoff, A. J., Eds.; Kluwer: Dordrecht, The Netherlands, 1996.
28. van Stokkum, I. H. M., Larsen, D. S., and van Grondelle, R. Biochim. Biophys. Acta-Bioenergetics 2004, 1657, 82-104
29. Bazhulina, N. P., Kirpichnikov, M. P., Morozov, Y. V., Savin, F. A., Sinyavina, L. B., and Florentiev, V. L. Mol. Photochem. 1974, 6, 367-396
30. Reiber, H. Biochim. Biophys. Acta 1972, 279, 310
31. Morrison, A. L. and Long, R. F. J. Chem. Soc. 1958, 211-215
32. Cornish, T. J. and Ledbetter, J. W. Photochem. Photobiol. 1985, 41, 15-19
33. McGlynn, S. P., Azumi, T., and Kinoshita, M. Molecular Spectroscopy of the Triplet State; Prentice Hall: Englewood Cliffs, NJ, 1969; Vol. 1.
34. Porter, G. and Windsor, M. W. Proc. R. Soc. London A-Mater. 1958, 245, 238-258
35. van Stokkum, I. H. M., Larsen, D. S., and van Grondelle, R. Biochim. Biophys. Acta-Bioenergetics 2004, 1658, 262-262
36. Ledbetter, J. W. and Schaertel, S. J. Photochem. Photobiol. B 1998, 47, 12-21
37. Harris, C. M., Johnson, R. J., and Metzler, D. E. Biochim. Biophys. Acta 1976, 421, 181-194
38. Kurauchi, Y., Ohga, K., Morita, S., Nagamura, T., and Matsuo, T. Chem. Lett. 1983, 349-352
39. Kurauchi, Y., Ohga, K., Yokoyama, A., and Morita, S. Agric. Biol. Chem. 1980, 44, 2499-2500
40. Metzler, C. M., Harris, A. G., and Metzler, D. E. Biochemistry 1988, 27, 4923-4933
41. Zabinski, R. F. and Toney, M. D. J. Am. Chem. Soc. 2001, 123, 193-198
42. Malcolm, B. A. and Kirsch, J. F. Biochem. Biophys. Res. Commun. 1985, 132, 915-921
43. Sibert, E. L., Reinhardt, W. P., and Hynes, J. T. J. Chem. Phys. 1984, 81, 1115-1134
44. Bohme, C. C., Arscott, L. D., Becker, K., Schirmer, R. H., and Williams, C. H. J. Biol. Chem. 2000, 275, 37317-37323
45. Swartz, T. E., Corchnoy, S. B., Christie, J. M., Lewis, J. W., Szundi, I., Briggs, W. R., and Bogomolni, R. A. J. Biol. Chem. 2001, 276, 36493-36500
46. Pearson, R. G. and Dillon, R. L. J. Am. Chem. Soc. 1953, 75, 2439-2443
47. Hoops, S., Sahle, S., Gauges, R., Lee, C., Pahle, J., Simus, N., Singhal, M., Xu, L., Mendes, P., and Kummer, U. Bioinformatics 2006, 22, 3067-3074
48. Richard, J. P., Amyes, T. L., Crugeiras, J., and Rios, A. Curr. Opin. Chem. Biol. 2009, 13, 475-483
49. Weng, S. H. and Leussing, D. L. J. Am. Chem. Soc. 1983, 105, 4082-4090
50. Crugeiras, J., Rios, A., Riveiros, E., and Richard, J. P. J. Am. Chem. Soc. 2009, 131, 15815-15824
51. Bridges, J. W., Davies, D. S., and Williams, R. T. Biochem. J. 1966, 98, 451
52. Toney, M. D. and Kirsch, J. F. Science 1989, 243, 1485-1488
53. Gloss, L. M. and Kirsch, J. F. Biochemistry 1995, 34, 3999-4007
54. Jenkins, W. T. and Taylor, R. T. J. Biol. Chem. 1965, 240, 2907
55. Jenkins, W. T. J. Biol. Chem. 1961, 236, 1121
56. Furumo, N. C. and Kirsch, J. F. Arch. Biochem. Biophys. 1995, 319, 49-54
57. Chen, H. Y. and Phillips, R. S. Biochemistry 1993, 32, 11591-11599
58. Zhou, X. Z., Jin, X. G., Medhekar, R., Chen, X. Y., Dieckmann, T., and Toney, M. D. Biochemistry 2001, 40, 1367-1377
59. Petrich, J. W., Lambry, J. C., Kuczera, K., Karplus, M., Poyart, C., and Martin, J. L. Biochemistry 1991, 30, 3975-3987