F2dock: Fast fourier protein-protein docking

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Volumn 8, Issue 1, 2011, Pages 45-58

  Bajaj, Chandrajit L ^a   Chowdhury, Rezaul ^a   Siddahanavalli, Vinay ^b  

^a University of Texas at Austin   (United States)

^b GOOGLE INC   (United States)

Author keywords

algorithms; Computational structural biology; docking; fast Fourier transform; protein protein interactions; redocking.

Indexed keywords

ADAPTIVE SEARCH; DESOLVATION ENERGY; DOCKING ALGORITHMS; DOCKING SOLUTIONS; DRUG DESIGN; EXPERIMENTAL STUDIES; FOURIER; LENNARD-JONES POTENTIAL; MULTI-CORE MACHINES; MULTITHREADED; MUTUAL INTERACTION; NON-UNIFORM FAST FOURIER TRANSFORMS; PROTEIN-PROTEIN DOCKING; PROTEIN-PROTEIN INTERACTIONS; RE-RANKING; REDOCKING.; RELATIVE TRANSFORMATION; SHAPE COMPLEMENTARITY; SPEED-UPS; STABLE COMPLEXES; STRUCTURAL BIOLOGY; STRUCTURE DETERMINATION;

ADAPTIVE ALGORITHMS; COMPLEXATION; DOCKING; DOCKS; FAST FOURIER TRANSFORMS; HYDRAULIC STRUCTURES;

PROTEINS;

RUMEX;

BACTERIAL PROTEIN; PROTEIN;

ALGORITHM; ANIMAL; ARTICLE; BINDING SITE; BIOLOGY; CATTLE; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER PROGRAM; FOURIER ANALYSIS; HUMAN; METABOLISM; METHODOLOGY; PROTEIN ANALYSIS; PROTEIN BINDING; STATIC ELECTRICITY; STATISTICAL MODEL;

ALGORITHMS; ANIMALS; BACTERIAL PROTEINS; BINDING SITES; CATTLE; COMPUTATIONAL BIOLOGY; FOURIER ANALYSIS; HUMANS; MODELS, MOLECULAR; MODELS, STATISTICAL; PROTEIN BINDING; PROTEIN INTERACTION MAPPING; PROTEINS; SOFTWARE; STATIC ELECTRICITY;

EID: 78449292668     PISSN: 15455963     EISSN: None     Source Type: Journal    
DOI: 10.1109/TCBB.2009.57     Document Type: Article

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