Topology improves phylogenetic motif functional site predictions

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Volumn 8, Issue 1, 2011, Pages 226-233

  Kc, Dukka B ^a   Livesay, Dennis R ^a  

^a UNIVERSITY OF NORTH CAROLINA AT CHARLOTTE   (United States)

Author keywords

distance matrix.; functional site prediction; Phylogenetic motif; phylogenetic tree

Indexed keywords

DATA SETS; DERIVED DATA; DISTANCE MATRICES; FUNCTIONAL SITES; MATRIX; PHYLOGENETIC MOTIF; PHYLOGENETIC RECONSTRUCTION; PHYLOGENETIC TREES; PREDICTION ACCURACY; PREDICTIVE POWER; PROTEIN FUNCTIONAL SITES; PROTEIN-PROTEIN INTERACTIONS; SIMILARITY SCORES; TREE TOPOLOGY;

ALIGNMENT; BIOINFORMATICS; BIOLOGY; FORECASTING; PROTEINS; TOPOLOGY; TREES (MATHEMATICS);

MATRIX ALGEBRA;

PROTEIN;

ALGORITHM; AREA UNDER THE CURVE; ARTICLE; BINDING SITE; BIOLOGICAL MODEL; BIOLOGY; CHEMISTRY; COMPUTER PROGRAM; METHODOLOGY; PHYLOGENY; PROTEIN DOMAIN; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; STATISTICAL MODEL;

ALGORITHMS; AREA UNDER CURVE; BINDING SITES; COMPUTATIONAL BIOLOGY; MODELS, GENETIC; MODELS, STATISTICAL; PHYLOGENY; PROTEIN INTERACTION DOMAINS AND MOTIFS; PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN; SOFTWARE;

EID: 78449282705     PISSN: 15455963     EISSN: None     Source Type: Journal    
DOI: 10.1109/TCBB.2009.60     Document Type: Article

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