-
1
-
-
0032694577
-
'Metabonomics': Understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data
-
Nicholson, J. K.; Lindon, J. C.; Holmes, E. 'Metabonomics': understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data Xenobiotica 1999, 29 (11) 1181-189
-
(1999)
Xenobiotica
, vol.29
, Issue.11
, pp. 1181-189
-
-
Nicholson, J.K.1
Lindon, J.C.2
Holmes, E.3
-
2
-
-
0036007687
-
Metabolomics-the link between genotypes and phenotypes
-
Fiehn, O. Metabolomics-the link between genotypes and phenotypes Plant Mol. Biol. 2002, 48 (1-2) 155-171
-
(2002)
Plant Mol. Biol.
, vol.48
, Issue.1-2
, pp. 155-171
-
-
Fiehn, O.1
-
3
-
-
2442719174
-
Metabonomics technologies and their applications in physiological monitoring, drug safety assessment and disease diagnosis
-
Lindon, J. C.; Holmes, E.; Bollard, M. E.; Stanley, E. G.; Nicholson, J. K. Metabonomics technologies and their applications in physiological monitoring, drug safety assessment and disease diagnosis Biomarkers 2004, 9 (1) 1-31
-
(2004)
Biomarkers
, vol.9
, Issue.1
, pp. 1-31
-
-
Lindon, J.C.1
Holmes, E.2
Bollard, M.E.3
Stanley, E.G.4
Nicholson, J.K.5
-
4
-
-
0345270397
-
Plant metabolomics: Large-scale phytochemistry in the functional genomics era
-
Sumner, L. W.; Mendes, P.; Dixon, R. A. Plant metabolomics: large-scale phytochemistry in the functional genomics era Phytochemistry 2003, 62 (6) 817-836
-
(2003)
Phytochemistry
, vol.62
, Issue.6
, pp. 817-836
-
-
Sumner, L.W.1
Mendes, P.2
Dixon, R.A.3
-
5
-
-
27244437784
-
Metabolomics in human nutrition: Opportunities and challenges
-
Gibney, M. J.; Walsh, M.; Brennan, L.; Roche, H. M.; German, B.; van Ommen, B. Metabolomics in human nutrition: opportunities and challenges Am. J. Clin. Nutr. 2005, 82 (3) 497-503
-
(2005)
Am. J. Clin. Nutr.
, vol.82
, Issue.3
, pp. 497-503
-
-
Gibney, M.J.1
Walsh, M.2
Brennan, L.3
Roche, H.M.4
German, B.5
Van Ommen, B.6
-
6
-
-
20544466649
-
Metabonomics in toxicology: A review
-
Robertson, D. G. Metabonomics in toxicology: a review Toxicol. Sci. 2005, 85 (2) 809-822
-
(2005)
Toxicol. Sci.
, vol.85
, Issue.2
, pp. 809-822
-
-
Robertson, D.G.1
-
7
-
-
33847358695
-
Analytical strategies in metabonomics
-
Lenz, E. M.; Wilson, I. D. Analytical strategies in metabonomics J. Proteome Res. 2007, 6 (2) 443-458
-
(2007)
J. Proteome Res.
, vol.6
, Issue.2
, pp. 443-458
-
-
Lenz, E.M.1
Wilson, I.D.2
-
8
-
-
67650479361
-
NCBI Peptidome: A new public repository for mass spectrometry peptide identifications
-
Slotta, D. J.; Barrett, T.; Edgar, R. NCBI Peptidome: a new public repository for mass spectrometry peptide identifications Nat. Biotechnol. 2009, 27 (7) 600-601
-
(2009)
Nat. Biotechnol.
, vol.27
, Issue.7
, pp. 600-601
-
-
Slotta, D.J.1
Barrett, T.2
Edgar, R.3
-
9
-
-
65249132985
-
MetAlign: Interface-driven, versatile metabolomics tool for hyphenated full-scan mass spectrometry data preprocessing
-
Lommen, A. MetAlign: interface-driven, versatile metabolomics tool for hyphenated full-scan mass spectrometry data preprocessing Anal. Chem. 2009, 81 (8) 3079-3086
-
(2009)
Anal. Chem.
, vol.81
, Issue.8
, pp. 3079-3086
-
-
Lommen, A.1
-
10
-
-
33845869336
-
MathDAMP: A package for differential analysis of metabolite profiles
-
Baran, R.; Kochi, H.; Saito, N.; Suematsu, M.; Soga, T.; Nishioka, T.; Robert, M.; Tomita, M. MathDAMP: a package for differential analysis of metabolite profiles BMC Bioinf. 2006, 7, 530
-
(2006)
BMC Bioinf.
, vol.7
, pp. 530
-
-
Baran, R.1
Kochi, H.2
Saito, N.3
Suematsu, M.4
Soga, T.5
Nishioka, T.6
Robert, M.7
Tomita, M.8
-
11
-
-
33751373090
-
MetaQuant: A tool for the automatic quantification of GC/MS-based metabolome data
-
Bunk, B.; Kucklick, M.; Jonas, R.; Munch, R.; Schobert, M.; Jahn, D.; Hiller, K. MetaQuant: a tool for the automatic quantification of GC/MS-based metabolome data Bioinformatics 2006, 22 (23) 2962-2965
-
(2006)
Bioinformatics
, vol.22
, Issue.23
, pp. 2962-2965
-
-
Bunk, B.1
Kucklick, M.2
Jonas, R.3
Munch, R.4
Schobert, M.5
Jahn, D.6
Hiller, K.7
-
12
-
-
33745728711
-
MET-IDEA: Data extraction tool for mass spectrometry-based metabolomics
-
Broeckling, C. D.; Reddy, I. R.; Duran, A. L.; Zhao, X.; Sumner, L. W. MET-IDEA: data extraction tool for mass spectrometry-based metabolomics Anal. Chem. 2006, 78 (13) 4334-4341
-
(2006)
Anal. Chem.
, vol.78
, Issue.13
, pp. 4334-4341
-
-
Broeckling, C.D.1
Reddy, I.R.2
Duran, A.L.3
Zhao, X.4
Sumner, L.W.5
-
13
-
-
1542408614
-
A strategy for identifying differences in large series of metabolomic samples analyzed by GC/MS
-
Jonsson, P.; Gullberg, J.; Nordstrom, A.; Kusano, M.; Kowalczyk, M.; Sjostrom, M.; Moritz, T. A strategy for identifying differences in large series of metabolomic samples analyzed by GC/MS Anal. Chem. 2004, 76 (6) 1738-1745
-
(2004)
Anal. Chem.
, vol.76
, Issue.6
, pp. 1738-1745
-
-
Jonsson, P.1
Gullberg, J.2
Nordstrom, A.3
Kusano, M.4
Kowalczyk, M.5
Sjostrom, M.6
Moritz, T.7
-
14
-
-
24644481093
-
High-throughput data analysis for detecting and identifying differences between samples in GC/MS-based metabolomic analyses
-
Jonsson, P.; Johansson, A. I.; Gullberg, J.; Trygg, J.; A, J.; Grung, B.; Marklund, S.; Sjostrom, M.; Antti, H.; Moritz, T. High-throughput data analysis for detecting and identifying differences between samples in GC/MS-based metabolomic analyses Anal. Chem. 2005, 77 (17) 5635-5642
-
(2005)
Anal. Chem.
, vol.77
, Issue.17
, pp. 5635-5642
-
-
Jonsson, P.1
Johansson, A.I.2
Gullberg, J.3
Trygg, J.4
Grung, B.5
Marklund, S.6
Sjostrom, M.7
Antti, H.8
Moritz, T.9
-
15
-
-
33745045937
-
Predictive metabolite profiling applying hierarchical multivariate curve resolution to GC-MS data-a potential tool for multi-parametric diagnosis
-
Jonsson, P.; Johansson, E. S.; Wuolikainen, A.; Lindberg, J.; Schuppe-Koistinen, I.; Kusano, M.; Sjostrom, M.; Trygg, J.; Moritz, T.; Antti, H. Predictive metabolite profiling applying hierarchical multivariate curve resolution to GC-MS data-a potential tool for multi-parametric diagnosis J. Proteome Res. 2006, 5 (6) 1407-1414
-
(2006)
J. Proteome Res.
, vol.5
, Issue.6
, pp. 1407-1414
-
-
Jonsson, P.1
Johansson, E.S.2
Wuolikainen, A.3
Lindberg, J.4
Schuppe-Koistinen, I.5
Kusano, M.6
Sjostrom, M.7
Trygg, J.8
Moritz, T.9
Antti, H.10
-
16
-
-
0033452842
-
An integrated method for spectrum extraction and compound identification from gas chromatography/mass spectrometry data
-
Stein, S. E. An integrated method for spectrum extraction and compound identification from gas chromatography/mass spectrometry data J. Am. Soc. Mass Spectrom. 1999, 10 (8) 770-781
-
(1999)
J. Am. Soc. Mass Spectrom.
, vol.10
, Issue.8
, pp. 770-781
-
-
Stein, S.E.1
-
17
-
-
40049092920
-
TagFinder for the quantitative analysis of gas chromatography-mass spectrometry (GC-MS)-based metabolite profiling experiments
-
Luedemann, A.; Strassburg, K.; Erban, A.; Kopka, J. TagFinder for the quantitative analysis of gas chromatography-mass spectrometry (GC-MS)-based metabolite profiling experiments Bioinformatics 2008, 24 (5) 732-737
-
(2008)
Bioinformatics
, vol.24
, Issue.5
, pp. 732-737
-
-
Luedemann, A.1
Strassburg, K.2
Erban, A.3
Kopka, J.4
-
18
-
-
77950369068
-
An optimized procedure for metabonomic analysis of rat liver tissue using gas chromatography/time-of-flight mass spectrometry
-
Pan, L.; Qiu, Y.; Chen, T.; Lin, J.; Chi, Y.; Su, M.; Zhao, A.; Jia, W. An optimized procedure for metabonomic analysis of rat liver tissue using gas chromatography/time-of-flight mass spectrometry J. Pharm. Biomed. Anal. 2010, 52 (4) 589-596
-
(2010)
J. Pharm. Biomed. Anal.
, vol.52
, Issue.4
, pp. 589-596
-
-
Pan, L.1
Qiu, Y.2
Chen, T.3
Lin, J.4
Chi, Y.5
Su, M.6
Zhao, A.7
Jia, W.8
-
19
-
-
58149382045
-
Transcriptomic and metabonomic profiling of obesity-prone and obesity-resistant rats under high fat diet
-
Li, H.; Xie, Z.; Lin, J.; Song, H.; Wang, Q.; Wang, K.; Su, M.; Qiu, Y.; Zhao, T.; Song, K.; Wang, X.; Zhou, M.; Liu, P.; Zhao, G.; Zhang, Q.; Jia, W. Transcriptomic and metabonomic profiling of obesity-prone and obesity-resistant rats under high fat diet J. Proteome Res. 2008, 7 (11) 4775-4783
-
(2008)
J. Proteome Res.
, vol.7
, Issue.11
, pp. 4775-4783
-
-
Li, H.1
Xie, Z.2
Lin, J.3
Song, H.4
Wang, Q.5
Wang, K.6
Su, M.7
Qiu, Y.8
Zhao, T.9
Song, K.10
Wang, X.11
Zhou, M.12
Liu, P.13
Zhao, G.14
Zhang, Q.15
Jia, W.16
-
20
-
-
70350028279
-
Serum metabolite profiling of human colorectal cancer using GC-TOFMS and UPLC-QTOFMS
-
Qiu, Y.; Cai, G.; Su, M.; Chen, T.; Zheng, X.; Xu, Y.; Ni, Y.; Zhao, A.; Xu, L. X.; Cai, S.; Jia, W. Serum metabolite profiling of human colorectal cancer using GC-TOFMS and UPLC-QTOFMS J. Proteome Res. 2009, 8 (10) 4844-4850
-
(2009)
J. Proteome Res.
, vol.8
, Issue.10
, pp. 4844-4850
-
-
Qiu, Y.1
Cai, G.2
Su, M.3
Chen, T.4
Zheng, X.5
Xu, Y.6
Ni, Y.7
Zhao, A.8
Xu, L.X.9
Cai, S.10
Jia, W.11
-
21
-
-
60549117342
-
Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis
-
Yang, C.; He, Z.; Yu, W. Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis BMC Bioinf. 2009, 10, 4+
-
(2009)
BMC Bioinf.
, vol.10
-
-
Yang, C.1
He, Z.2
Yu, W.3
-
22
-
-
0009050353
-
Spectral deconvolution for overlapping GC/MS components
-
Colby, B. N. Spectral deconvolution for overlapping GC/MS components J. Am. Soc. Mass Spectrom. 1992, 3, 558-562
-
(1992)
J. Am. Soc. Mass Spectrom.
, vol.3
, pp. 558-562
-
-
Colby, B.N.1
-
23
-
-
0033452842
-
An integrated method for spectrum extraction and compound identification from GC/MS data
-
Stein, S. E. An integrated method for spectrum extraction and compound identification from GC/MS data J. Am. Soc. Mass Spectrom. 1999, 10, 770-781
-
(1999)
J. Am. Soc. Mass Spectrom.
, vol.10
, pp. 770-781
-
-
Stein, S.E.1
-
24
-
-
0023453329
-
Silhouettes: A graphical aid to the interpretation and validation of cluster analysis
-
Rousseeuw, P. J. Silhouettes: a graphical aid to the interpretation and validation of cluster analysis Comput. Appl. Math. 1987, 20, 53-65
-
(1987)
Comput. Appl. Math.
, vol.20
, pp. 53-65
-
-
Rousseeuw, P.J.1
-
25
-
-
33646930668
-
A comparison of three algorithms for chromatograms alignment
-
van Nederkassel, A. M.; Daszykowski, M.; Eilers, P. H. C.; Heyden, Y. V. A comparison of three algorithms for chromatograms alignment J. Chromatogr., A 2006, 1118 (2) 199-210
-
(2006)
J. Chromatogr., A
, vol.1118
, Issue.2
, pp. 199-210
-
-
Van Nederkassel, A.M.1
Daszykowski, M.2
Eilers, P.H.C.3
Heyden, Y.V.4
-
26
-
-
33646264529
-
Advances in proteomics data analysis and display using an accurate mass and time tag approach
-
Zimmer, J. S.; Monroe, M. E.; Qian, W. J.; Smith, R. D. Advances in proteomics data analysis and display using an accurate mass and time tag approach Mass Spectrom. Rev. 2006, 25 (3) 450-82
-
(2006)
Mass Spectrom. Rev.
, vol.25
, Issue.3
, pp. 450-82
-
-
Zimmer, J.S.1
Monroe, M.E.2
Qian, W.J.3
Smith, R.D.4
-
27
-
-
33750615386
-
PEPPeR, a platform for experimental proteomic pattern recognition
-
Jaffe, J. D.; Mani, D. R.; Leptos, K. C.; Church, G. M.; Gillette, M. A.; Carr, S. A. PEPPeR, a platform for experimental proteomic pattern recognition Mol. Cell. Proteomics 2006, 5 (10) 1927-1941
-
(2006)
Mol. Cell. Proteomics
, vol.5
, Issue.10
, pp. 1927-1941
-
-
Jaffe, J.D.1
Mani, D.R.2
Leptos, K.C.3
Church, G.M.4
Gillette, M.A.5
Carr, S.A.6
-
28
-
-
78149403995
-
-
NIST MS Search Program (software version 2.0)
-
NIST MS Search Program (software version 2.0). http://www.nist.gov/srd/ nist1a.htm.
-
-
-
-
29
-
-
33847369007
-
Chemometrics in metabonomics
-
Trygg, J.; Holmes, E.; Lundstedt, T. Chemometrics in metabonomics J. Proteome Res. 2007, 6 (2) 469-479
-
(2007)
J. Proteome Res.
, vol.6
, Issue.2
, pp. 469-479
-
-
Trygg, J.1
Holmes, E.2
Lundstedt, T.3
-
30
-
-
33747019547
-
Centering, scaling, and transformations: Improving the biological information content of metabolomics data
-
van den Berg, R. A.; Hoefsloot, H. C.; Westerhuis, J. A.; Smilde, A. K.; van der Werf, M. J. Centering, scaling, and transformations: improving the biological information content of metabolomics data BMC Genomics 2006, 7, 142
-
(2006)
BMC Genomics
, vol.7
, pp. 142
-
-
Van Den Berg, R.A.1
Hoefsloot, H.C.2
Westerhuis, J.A.3
Smilde, A.K.4
Van Der Werf, M.J.5
-
31
-
-
46749154158
-
Metabolic profiling reveals disorder of amino acid metabolism in four brain regions from a rat model of chronic unpredictable mild stress
-
Yan, N.; Mingming, S.; Jinchao, L.; Xiaoyan, W.; Yunping, Q.; Aihua, Z.; Tianlu, C.; Wei, J. Metabolic profiling reveals disorder of amino acid metabolism in four brain regions from a rat model of chronic unpredictable mild stress FEBS Lett. 2008, 582 (17) 2627-2636
-
(2008)
FEBS Lett.
, vol.582
, Issue.17
, pp. 2627-2636
-
-
Yan, N.1
Mingming, S.2
Jinchao, L.3
Xiaoyan, W.4
Yunping, Q.5
Aihua, Z.6
Tianlu, C.7
Wei, J.8
|