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Volumn 132, Issue 1-2, 2011, Pages 31-40

Molecular cytogenetic characterization of the genome organization of the 6-banded armadillo (Euphractus sexcinctus)

Author keywords

6 Banded armadillo; Ancestral Xenarthra karyotype; Cloning; Cross species chromosome painting; FISH mapping; Repetitive DNAs; Sequencing

Indexed keywords

ANIMAL CELL; ARMADILLO; ARTICLE; C BANDING; CHROMOSOME MAP; CHROMOSOME PAINTING; CYTOGENETICS; EDENTATA; EUCHROMATIN; FEMALE; FLUORESCENCE IN SITU HYBRIDIZATION; GENETIC ASSOCIATION; GENOME ANALYSIS; HUMAN; KARYOTYPE; MOLECULAR BIOLOGY; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SYNAPOMORPHY;

EID: 78149360703     PISSN: 14248581     EISSN: None     Source Type: Journal    
DOI: 10.1159/000318706     Document Type: Article
Times cited : (9)

References (41)
  • 1
    • 0033555906 scopus 로고    scopus 로고
    • Tandem repeats finder: A program to analyze DNA sequences
    • Benson G: Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res 27:573-580 (1999).
    • (1999) Nucleic Acids Res. , vol.27 , pp. 573-580
    • Benson, G.1
  • 2
    • 78149360263 scopus 로고
    • Protein sequence analysis applied to Xenarthran and Pholidote phylogeny
    • Montgomery GG ed:, Sloths and Vermilinguas Smithsonian Institution Press, Washington
    • De Jong WW, Zweers A, Joysey KA, Gleaves JT, Boulter D: Protein sequence analysis applied to Xenarthran and Pholidote phylogeny, in Montgomery GG (ed): The Evolution and Ecology of Armadillos, Sloths and Vermilinguas (Smithsonian Institution Press, Washington 1985).
    • (1985) The Evolution and Ecology of Armadillos
    • De Jong, W.W.1    Zweers, A.2    Joysey, K.A.3    Gleaves, J.T.4    Boulter, D.5
  • 3
    • 0035822610 scopus 로고    scopus 로고
    • The evolution of armadillos, anteaters and sloths depicted by nuclear and mitochondrial phylogenies: Implications for the status of the enigmatic fossil Eurotamandua
    • Delsuc F, Catzeflis FM, Stanhope MJ, Douzery EJ: The evolution of armadillos, anteaters and sloths depicted by nuclear and mitochondrial phylogenies: implications for the status of the enigmatic fossil Eurotamandua. Proc Biol Sci 268:1605-1615 (2001).
    • (2001) Proc. Biol. Sci. , vol.268 , pp. 1605-1615
    • Delsuc, F.1    Catzeflis, F.M.2    Stanhope, M.J.3    Douzery, E.J.4
  • 4
    • 0036792101 scopus 로고    scopus 로고
    • Molecular phylogeny of living xenarthrans and the impact of character and taxon sampling on the placental tree rooting
    • Delsuc F, Scally M, Madsen O, Stanhope MJ, de Jong WW, et al: Molecular phylogeny of living xenarthrans and the impact of character and taxon sampling on the placental tree rooting. Mol Biol Evol 19:1656-1671 (2002).
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 1656-1671
    • Delsuc, F.1    Scally, M.2    Madsen, O.3    Stanhope, M.J.4    De Jong, W.W.5
  • 5
    • 0141609701 scopus 로고    scopus 로고
    • Molecular systematics of armadillos (Xenarthra, Dasypodidae): Contribution of maximum likelihood and Bayesian analyses of mitochondrial and nuclear genes
    • Delsuc F, Stanhope MJ, Douzery EJ: Molecular systematics of armadillos (Xenarthra, Dasypodidae): contribution of maximum likelihood and Bayesian analyses of mitochondrial and nuclear genes. Mol Phylogenet Evol 28:261-275 (2003).
    • (2003) Mol. Phylogenet Evol. , vol.28 , pp. 261-275
    • Delsuc, F.1    Stanhope, M.J.2    Douzery, E.J.3
  • 6
    • 2942534605 scopus 로고    scopus 로고
    • Influence of Tertiary paleoenvironmental changes on the diversification of South American mammals: A relaxed molecular clock study within xenarthrans
    • Delsuc F, Vizcaino SF, Douzery EJ: Influence of Tertiary paleoenvironmental changes on the diversification of South American mammals: a relaxed molecular clock study within xenarthrans. BMC Evol Biol 4:11 (2004).
    • (2004) BMC Evol. Biol. , vol.4 , pp. 11
    • Delsuc, F.1    Vizcaino, S.F.2    Douzery, E.J.3
  • 8
    • 26944454792 scopus 로고    scopus 로고
    • Low rate of genomic repatterning in Xenarthra inferred from chromosome painting data
    • Dobigny G, Yang F, O'Brien PC, Volobouev V, Kovács A, et al: Low rate of genomic repatterning in Xenarthra inferred from chromosome painting data. Chromosome Res 13:651-663 (2005).
    • (2005) Chromosome Res. , vol.13 , pp. 651-663
    • Dobigny, G.1    Yang, F.2    O'Brien, P.C.3    Volobouev, V.4    Kovács, A.5
  • 9
    • 0002622711 scopus 로고
    • The phylogeny of the Xenarthra
    • Montgomery GG ed:, Sloths and Vermilinguas Smithsonian Institution Press, Washington
    • Engelmann GF: The phylogeny of the Xenarthra, in Montgomery GG (ed): The Evolution and Ecology of Armadillos, Sloths and Vermilinguas (Smithsonian Institution Press, Washington 1985).
    • (1985) The Evolution and Ecology of Armadillos
    • Engelmann, G.F.1
  • 10
    • 0037478653 scopus 로고    scopus 로고
    • Towards the delineation of the ancestral eutherian genome organization: Comparative genome maps of human and the African elephant (Loxodonta africana) generated by chromosome painting
    • Frönicke L, Wienberg J, Stone G, Adams L, Stanyon R: Towards the delineation of the ancestral eutherian genome organization: comparative genome maps of human and the African elephant (Loxodonta africana) generated by chromosome painting. Proc Biol Sci 270:1331-1340 (2003).
    • (2003) Proc. Biol. Sci. , vol.270 , pp. 1331-1340
    • Frönicke, L.1    Wienberg, J.2    Stone, G.3    Adams, L.4    Stanyon, R.5
  • 13
    • 0002074955 scopus 로고
    • Toward a phylogenetic classification of the Mammalia
    • Luckett WP, Szalay FS eds:, Plenum Press, New York
    • McKenna MC: Toward a phylogenetic classification of the Mammalia, in Luckett WP, Szalay FS (eds): Phylogeny of the Primates (Plenum Press, New York 1975).
    • (1975) Phylogeny of the Primates
    • McKenna, M.C.1
  • 14
    • 35848949073 scopus 로고    scopus 로고
    • Retroposed elements and their flanking regions resolve the evolutionary history of xenarthran mammals (armadillos, anteaters, and sloths)
    • Möller-Krull M, Delsuc F, Churakov G, Marker C, Superina M, et al: Retroposed elements and their flanking regions resolve the evolutionary history of xenarthran mammals (armadillos, anteaters, and sloths). Mol Biol Evol 24:2573-2582 (2007).
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 2573-2582
    • Möller-Krull, M.1    Delsuc, F.2    Churakov, G.3    Marker, C.4    Superina, M.5
  • 15
    • 0035252080 scopus 로고    scopus 로고
    • Molecular phylogenetics and the origins of placental mammals
    • Murphy WJ, Eizirik E, Johnson WE, Zhang YP, Ryder OA, et al: Molecular phylogenetics and the origins of placental mammals. Nature 409:614-618 (2001).
    • (2001) Nature , vol.409 , pp. 614-618
    • Murphy, W.J.1    Eizirik, E.2    Johnson, W.E.3    Zhang, Y.P.4    Ryder, O.A.5
  • 17
    • 34250627672 scopus 로고    scopus 로고
    • Chromosome painting among Proboscidea, Hyracoidea and Sirenia: Support for Paenungulata (Afrotheria, Mammalia) but not Tethytheria
    • Pardini AT, O'Brien PC, Fu B, Bonde RK, Elder FF, et al: Chromosome painting among Proboscidea, Hyracoidea and Sirenia: support for Paenungulata (Afrotheria, Mammalia) but not Tethytheria. Proc Biol Sci 274:1333-1340 (2007).
    • (2007) Proc. Biol. Sci. , vol.274 , pp. 1333-1340
    • Pardini, A.T.1    O'Brien, P.C.2    Fu, B.3    Bonde, R.K.4    Elder, F.F.5
  • 18
    • 49749129961 scopus 로고    scopus 로고
    • Confirming the phylogeny of mammals by use of large comparative sequence data sets
    • NISC Comparative Sequencing Program
    • Prasad AB, Allard MW, NISC Comparative Sequencing Program, Green ED: Confirming the phylogeny of mammals by use of large comparative sequence data sets. Mol Biol Evol 25:1795-1808 (2008).
    • (2008) Mol. Biol. Evol. , vol.25 , pp. 1795-1808
    • Prasad, A.B.1    Allard, M.W.2    Green, E.D.3
  • 19
    • 58149152860 scopus 로고    scopus 로고
    • Defining the ancestral eutherian karyotype: A cladistic interpretation of chromosome painting and genome sequence assembly data
    • Robinson TJ, Ruiz-Herrera A: Defining the ancestral eutherian karyotype: a cladistic interpretation of chromosome painting and genome sequence assembly data. Chromosome Res 16:1133-1141 (2008).
    • (2008) Chromosome Res. , vol.16 , pp. 1133-1141
    • Robinson, T.J.1    Ruiz-Herrera, A.2
  • 20
    • 3242669940 scopus 로고    scopus 로고
    • Cross-species chromosome painting in the golden mole and elephant-shrew: Support for the mammalian clades Afrotheria and Afroinsectiphillia but not Afroinsectivora
    • Robinson TJ, Fu B, Ferguson-Smith MA, Yang F: Cross-species chromosome painting in the golden mole and elephant-shrew: support for the mammalian clades Afrotheria and Afroinsectiphillia but not Afroinsectivora. Proc Biol Sci 271:1477-1484 (2004).
    • (2004) Proc. Biol. Sci. , vol.271 , pp. 1477-1484
    • Robinson, T.J.1    Fu, B.2    Ferguson-Smith, M.A.3    Yang, F.4
  • 21
    • 0033793019 scopus 로고    scopus 로고
    • Rare genomic changes as a tool for phylogenetics
    • Rokas A, Holland PW: Rare genomic changes as a tool for phylogenetics. Trends Ecol Evol 15:454-459 (2000).
    • (2000) Trends Ecol. Evol. , vol.15 , pp. 454-459
    • Rokas, A.1    Holland, P.W.2
  • 22
    • 0028306521 scopus 로고
    • Comparative chromosome painting discloses homologous segments in distantly related mammals
    • Scherthan H, Cremer T, Arnason U, Lima-de-Faria A, Weier HU, et al: Comparative chromosome painting discloses homologous segments in distantly related mammals. Nature Genet 6:342-347 (1994).
    • (1994) Nature Genet. , vol.6 , pp. 342-347
    • Scherthan, H.1    Cremer, T.2    Arnason, U.3    Lima-de-Faria, A.4    Weier, H.U.5
  • 23
    • 0015258469 scopus 로고
    • The use of proteolytic enzymes for the mapping of structural rearrangements in the chromosomes of man
    • Seabright M: The use of proteolytic enzymes for the mapping of structural rearrangements in the chromosomes of man. Chromosoma 36:204-210 (1972).
    • (1972) Chromosoma , vol.36 , pp. 204-210
    • Seabright, M.1
  • 25
    • 0015423706 scopus 로고
    • A simple technique for demonstrating centromeric heterochromatin
    • Sumner AT: A simple technique for demonstrating centromeric heterochromatin. Exp Cell Res 75:304-306 (1972).
    • (1972) Exp. Cell. Res. , vol.75 , pp. 304-306
    • Sumner, A.T.1
  • 26
    • 33746590373 scopus 로고    scopus 로고
    • The ancestral eutherian karyotype is present in Xenarthra
    • Svartman M, Stone G, Stanyon R: The ancestral eutherian karyotype is present in Xenarthra. PLoS Genet 2: e109 (2006).
    • (2006) PLoS Genet. , vol.2
    • Svartman, M.1    Stone, G.2    Stanyon, R.3
  • 28
    • 0033085021 scopus 로고    scopus 로고
    • The virtues of gaps: Xenarthran (Edentate) monophyly supported by a unique deletion in alpha A-crystallin
    • van Dijk MA, Paradis E, Catzeflis F, de Jong WW: The virtues of gaps: xenarthran (Edentate) monophyly supported by a unique deletion in alpha A-crystallin. Syst Biol 48:94-106 (1999).
    • (1999) Syst. Biol. , vol.48 , pp. 94-106
    • Van Dijk, M.A.1    Paradis, E.2    Catzeflis, F.3    De Jong, W.W.4
  • 29
    • 6344262106 scopus 로고    scopus 로고
    • LINE-1 distribution in Afrotheria and Xenarthra: Implications for understanding the evolution of LINE-1 in eutherian genomes
    • Waters PD, Dobigny G, Pardini AT, Robinson TJ: LINE-1 distribution in Afrotheria and Xenarthra: implications for understanding the evolution of LINE-1 in eutherian genomes. Chromosoma 113:137-144 (2004).
    • (2004) Chromosoma , vol.113 , pp. 137-144
    • Waters, P.D.1    Dobigny, G.2    Pardini, A.T.3    Robinson, T.J.4
  • 30
    • 55249100313 scopus 로고    scopus 로고
    • Evolutionary history of LINE-1 in the major clades of placental mammals
    • Waters PD, Dobigny G, Waddell PJ, Robinson TJ: Evolutionary history of LINE-1 in the major clades of placental mammals. PLoS One 2: e158 (2007).
    • (2007) PLoS One , vol.2
    • Waters, P.D.1    Dobigny, G.2    Waddell, P.J.3    Robinson, T.J.4
  • 31
    • 0000819569 scopus 로고
    • Systematics, distribution, ecology, and conservation of South American Edentates
    • Mares MA, Genoways HH eds:, University of Pittsburgh Press, Pittsburgh
    • Wetzel RM: Systematics, distribution, ecology, and conservation of South American Edentates, in Mares MA, Genoways HH (eds): Mammalian Biology in South America (University of Pittsburgh Press, Pittsburgh 1982).
    • (1982) Mammalian Biology in South America
    • Wetzel, R.M.1
  • 32
    • 0030845802 scopus 로고    scopus 로고
    • Conservation of human vs. Feline genome organization revealed by reciprocal chromosome painting
    • Wienberg J, Stanyon R, Nash WG, O'Brien P C M, Yang F, et al: Conservation of human vs. Feline genome organization revealed by reciprocal chromosome painting. Cytogenet Cell Genet 77:211-217 (1997).
    • (1997) Cytogenet. Cell. Genet. , vol.77 , pp. 211-217
    • Wienberg, J.1    Stanyon, R.2    Nash, W.G.3    O'Brien, P.C.M.4    Yang, F.5
  • 33
    • 31344464468 scopus 로고    scopus 로고
    • New families of site-specific repetitive DNA sequences that comprise constitutive heterochromatin of the Syrian hamster (Mesocricetus auratus, Cricetinae, Rodentia)
    • Yamada K, Kamimura E, Kondo M, Tsuchiya K, Nishida-Umehara C, et al: New families of site-specific repetitive DNA sequences that comprise constitutive heterochromatin of the Syrian hamster (Mesocricetus auratus, Cricetinae, Rodentia). Chromosoma 115:36-49 (2006).
    • (2006) Chromosoma , vol.115 , pp. 36-49
    • Yamada, K.1    Kamimura, E.2    Kondo, M.3    Tsuchiya, K.4    Nishida-Umehara, C.5
  • 35
    • 0029018149 scopus 로고
    • A comparative study of karyotypes of muntjacs by chromosome painting
    • Yang F, Carter NP, Shi L, Ferguson-Smith MA: A comparative study of karyotypes of muntjacs by chromosome painting. Chromosoma 103:642-652 (1995).
    • (1995) Chromosoma , vol.103 , pp. 642-652
    • Yang, F.1    Carter, N.P.2    Shi, L.3    Ferguson-Smith, M.A.4
  • 36
    • 0033373189 scopus 로고    scopus 로고
    • A complete comparative chromosome map for the dog, red fox, and human and its integration with canine genetic maps
    • Yang F, O'Brien PC, Milne BS, Graphodatsky AS, Solanky N, et al: A complete comparative chromosome map for the dog, red fox, and human and its integration with canine genetic maps. Genomics 62:189-202 (1999).
    • (1999) Genomics , vol.62 , pp. 189-202
    • Yang, F.1    O'Brien, P.C.2    Milne, B.S.3    Graphodatsky, A.S.4    Solanky, N.5
  • 37
    • 0033864186 scopus 로고    scopus 로고
    • Reciprocal chromosome painting illuminates the history of genome evolution of the domestic cat, dog and human
    • Yang F, Graphodatsky AS, O'Brien P C M, Colabella A, Solanky N, et al: Reciprocal chromosome painting illuminates the history of genome evolution of the domestic cat, dog and human. Chromosome Res 8:393-404 (2000).
    • (2000) Chromosome Res. , vol.8 , pp. 393-404
    • Yang, F.1    Graphodatsky, A.S.2    O'Brien, P.C.M.3    Colabella, A.4    Solanky, N.5
  • 38
    • 0037417981 scopus 로고    scopus 로고
    • Reciprocal chromosome painting among human, aardvark, and elephant (superorder Afrotheria) reveals the likely eutherian ancestral karyotype
    • Yang F, Alkalaeva EZ, Perelman PL, Pardini AT, Harrison WR, et al: Reciprocal chromosome painting among human, aardvark, and elephant (superorder Afrotheria) reveals the likely eutherian ancestral karyotype. Proc Natl Acad Sci USA 100:1062-1066 (2003).
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 1062-1066
    • Yang, F.1    Alkalaeva, E.Z.2    Perelman, P.L.3    Pardini, A.T.4    Harrison, W.R.5
  • 39
    • 0442313539 scopus 로고    scopus 로고
    • Refined genome-wide comparative map of the domestic horse, donkey and human based on cross-species chromosome painting: Insight into the occasional fertility of mules
    • Yang F, Fu B, O'Brien PC, Nie W, Ryder OA, et al: Refined genome-wide comparative map of the domestic horse, donkey and human based on cross-species chromosome painting: insight into the occasional fertility of mules. Chromosome Res 12:65-76 (2004).
    • (2004) Chromosome Res. , vol.12 , pp. 65-76
    • Yang, F.1    Fu, B.2    O'Brien, P.C.3    Nie, W.4    Ryder, O.A.5
  • 40
    • 33646037989 scopus 로고    scopus 로고
    • Comparative genome maps of the pangolin, hedgehog, sloth, anteater and human revealed by cross-species chromosome painting: Further insight into the ancestral karyotype and genome evolution of eutherian mammals
    • Yang F, Graphodatsky AS, Li T, Fu B, Dobigny G, et al: Comparative genome maps of the pangolin, hedgehog, sloth, anteater and human revealed by cross-species chromosome painting: further insight into the ancestral karyotype and genome evolution of eutherian mammals. Chromosome Res 14:283-296 (2006).
    • (2006) Chromosome Res. , vol.14 , pp. 283-296
    • Yang, F.1    Graphodatsky, A.S.2    Li, T.3    Fu, B.4    Dobigny, G.5
  • 41
    • 79960842821 scopus 로고    scopus 로고
    • Generation of paint probes by flow-sorted and microdissected chromosomes
    • Liehr T ed:, Application Guide Springer-Verlag, Berlin
    • Yang F, Trifonov V, Ng BL, Kosyakova N, Carter NP: Generation of paint probes by flow-sorted and microdissected chromosomes, in Liehr T (ed): Fluorescence In Situ Hybridization (FISH) - Application Guide (Springer-Verlag, Berlin, 2009).
    • (2009) Fluorescence in Situ Hybridization (FISH)
    • Yang, F.1    Trifonov, V.2    Ng, B.L.3    Kosyakova, N.4    Carter, N.P.5


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