-
1
-
-
0033555906
-
Tandem repeats finder: A program to analyze DNA sequences
-
Benson G: Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res 27:573-580 (1999).
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 573-580
-
-
Benson, G.1
-
2
-
-
78149360263
-
Protein sequence analysis applied to Xenarthran and Pholidote phylogeny
-
Montgomery GG ed:, Sloths and Vermilinguas Smithsonian Institution Press, Washington
-
De Jong WW, Zweers A, Joysey KA, Gleaves JT, Boulter D: Protein sequence analysis applied to Xenarthran and Pholidote phylogeny, in Montgomery GG (ed): The Evolution and Ecology of Armadillos, Sloths and Vermilinguas (Smithsonian Institution Press, Washington 1985).
-
(1985)
The Evolution and Ecology of Armadillos
-
-
De Jong, W.W.1
Zweers, A.2
Joysey, K.A.3
Gleaves, J.T.4
Boulter, D.5
-
3
-
-
0035822610
-
The evolution of armadillos, anteaters and sloths depicted by nuclear and mitochondrial phylogenies: Implications for the status of the enigmatic fossil Eurotamandua
-
Delsuc F, Catzeflis FM, Stanhope MJ, Douzery EJ: The evolution of armadillos, anteaters and sloths depicted by nuclear and mitochondrial phylogenies: implications for the status of the enigmatic fossil Eurotamandua. Proc Biol Sci 268:1605-1615 (2001).
-
(2001)
Proc. Biol. Sci.
, vol.268
, pp. 1605-1615
-
-
Delsuc, F.1
Catzeflis, F.M.2
Stanhope, M.J.3
Douzery, E.J.4
-
4
-
-
0036792101
-
Molecular phylogeny of living xenarthrans and the impact of character and taxon sampling on the placental tree rooting
-
Delsuc F, Scally M, Madsen O, Stanhope MJ, de Jong WW, et al: Molecular phylogeny of living xenarthrans and the impact of character and taxon sampling on the placental tree rooting. Mol Biol Evol 19:1656-1671 (2002).
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1656-1671
-
-
Delsuc, F.1
Scally, M.2
Madsen, O.3
Stanhope, M.J.4
De Jong, W.W.5
-
5
-
-
0141609701
-
Molecular systematics of armadillos (Xenarthra, Dasypodidae): Contribution of maximum likelihood and Bayesian analyses of mitochondrial and nuclear genes
-
Delsuc F, Stanhope MJ, Douzery EJ: Molecular systematics of armadillos (Xenarthra, Dasypodidae): contribution of maximum likelihood and Bayesian analyses of mitochondrial and nuclear genes. Mol Phylogenet Evol 28:261-275 (2003).
-
(2003)
Mol. Phylogenet Evol.
, vol.28
, pp. 261-275
-
-
Delsuc, F.1
Stanhope, M.J.2
Douzery, E.J.3
-
6
-
-
2942534605
-
Influence of Tertiary paleoenvironmental changes on the diversification of South American mammals: A relaxed molecular clock study within xenarthrans
-
Delsuc F, Vizcaino SF, Douzery EJ: Influence of Tertiary paleoenvironmental changes on the diversification of South American mammals: a relaxed molecular clock study within xenarthrans. BMC Evol Biol 4:11 (2004).
-
(2004)
BMC Evol. Biol.
, vol.4
, pp. 11
-
-
Delsuc, F.1
Vizcaino, S.F.2
Douzery, E.J.3
-
8
-
-
26944454792
-
Low rate of genomic repatterning in Xenarthra inferred from chromosome painting data
-
Dobigny G, Yang F, O'Brien PC, Volobouev V, Kovács A, et al: Low rate of genomic repatterning in Xenarthra inferred from chromosome painting data. Chromosome Res 13:651-663 (2005).
-
(2005)
Chromosome Res.
, vol.13
, pp. 651-663
-
-
Dobigny, G.1
Yang, F.2
O'Brien, P.C.3
Volobouev, V.4
Kovács, A.5
-
9
-
-
0002622711
-
The phylogeny of the Xenarthra
-
Montgomery GG ed:, Sloths and Vermilinguas Smithsonian Institution Press, Washington
-
Engelmann GF: The phylogeny of the Xenarthra, in Montgomery GG (ed): The Evolution and Ecology of Armadillos, Sloths and Vermilinguas (Smithsonian Institution Press, Washington 1985).
-
(1985)
The Evolution and Ecology of Armadillos
-
-
Engelmann, G.F.1
-
10
-
-
0037478653
-
Towards the delineation of the ancestral eutherian genome organization: Comparative genome maps of human and the African elephant (Loxodonta africana) generated by chromosome painting
-
Frönicke L, Wienberg J, Stone G, Adams L, Stanyon R: Towards the delineation of the ancestral eutherian genome organization: comparative genome maps of human and the African elephant (Loxodonta africana) generated by chromosome painting. Proc Biol Sci 270:1331-1340 (2003).
-
(2003)
Proc. Biol. Sci.
, vol.270
, pp. 1331-1340
-
-
Frönicke, L.1
Wienberg, J.2
Stone, G.3
Adams, L.4
Stanyon, R.5
-
11
-
-
33846807058
-
Chromosome painting in the manatee supports Afrotheria and Paenungu lata
-
Kellogg ME, Burkett S, Dennis TR, Stone G, Gray BA, et al: Chromosome painting in the manatee supports Afrotheria and Paenungu lata. BMC Evol Biol 7:6 (2007).
-
(2007)
BMC Evol. Biol.
, vol.7
, pp. 6
-
-
Kellogg, M.E.1
Burkett, S.2
Dennis, T.R.3
Stone, G.4
Gray, B.A.5
-
12
-
-
0035252569
-
Parallel adaptive radiations in two major clades of placental mammals
-
DOI 10.1038/35054544
-
Madsen O, Scally M, Douady CJ, Kao DJ, DeBry RW, et al: Parallel adaptive radiations in two major clades of placental mammals. Nature 409:610-614 (2001). (Pubitemid 32154811)
-
(2001)
Nature
, vol.409
, Issue.6820
, pp. 610-614
-
-
Madsen, O.1
Scally, M.2
Douady, C.J.3
Kao, D.J.4
DeBry, R.W.5
Adkins, R.6
Amrine, H.M.7
Stanhope, M.J.8
De Jong, W.W.9
Springer, M.S.10
-
13
-
-
0002074955
-
Toward a phylogenetic classification of the Mammalia
-
Luckett WP, Szalay FS eds:, Plenum Press, New York
-
McKenna MC: Toward a phylogenetic classification of the Mammalia, in Luckett WP, Szalay FS (eds): Phylogeny of the Primates (Plenum Press, New York 1975).
-
(1975)
Phylogeny of the Primates
-
-
McKenna, M.C.1
-
14
-
-
35848949073
-
Retroposed elements and their flanking regions resolve the evolutionary history of xenarthran mammals (armadillos, anteaters, and sloths)
-
Möller-Krull M, Delsuc F, Churakov G, Marker C, Superina M, et al: Retroposed elements and their flanking regions resolve the evolutionary history of xenarthran mammals (armadillos, anteaters, and sloths). Mol Biol Evol 24:2573-2582 (2007).
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 2573-2582
-
-
Möller-Krull, M.1
Delsuc, F.2
Churakov, G.3
Marker, C.4
Superina, M.5
-
15
-
-
0035252080
-
Molecular phylogenetics and the origins of placental mammals
-
Murphy WJ, Eizirik E, Johnson WE, Zhang YP, Ryder OA, et al: Molecular phylogenetics and the origins of placental mammals. Nature 409:614-618 (2001).
-
(2001)
Nature
, vol.409
, pp. 614-618
-
-
Murphy, W.J.1
Eizirik, E.2
Johnson, W.E.3
Zhang, Y.P.4
Ryder, O.A.5
-
16
-
-
34147184456
-
Using genomic data to unravel the root of the placental mammal phylogeny
-
Murphy WJ, Pringle TH, Crider TA, Springer MS, Miller W: Using genomic data to unravel the root of the placental mammal phylogeny. Genome Res 17:413-421 (2007).
-
(2007)
Genome Res.
, vol.17
, pp. 413-421
-
-
Murphy, W.J.1
Pringle, T.H.2
Crider, T.A.3
Springer, M.S.4
Miller, W.5
-
17
-
-
34250627672
-
Chromosome painting among Proboscidea, Hyracoidea and Sirenia: Support for Paenungulata (Afrotheria, Mammalia) but not Tethytheria
-
Pardini AT, O'Brien PC, Fu B, Bonde RK, Elder FF, et al: Chromosome painting among Proboscidea, Hyracoidea and Sirenia: support for Paenungulata (Afrotheria, Mammalia) but not Tethytheria. Proc Biol Sci 274:1333-1340 (2007).
-
(2007)
Proc. Biol. Sci.
, vol.274
, pp. 1333-1340
-
-
Pardini, A.T.1
O'Brien, P.C.2
Fu, B.3
Bonde, R.K.4
Elder, F.F.5
-
18
-
-
49749129961
-
Confirming the phylogeny of mammals by use of large comparative sequence data sets
-
NISC Comparative Sequencing Program
-
Prasad AB, Allard MW, NISC Comparative Sequencing Program, Green ED: Confirming the phylogeny of mammals by use of large comparative sequence data sets. Mol Biol Evol 25:1795-1808 (2008).
-
(2008)
Mol. Biol. Evol.
, vol.25
, pp. 1795-1808
-
-
Prasad, A.B.1
Allard, M.W.2
Green, E.D.3
-
19
-
-
58149152860
-
Defining the ancestral eutherian karyotype: A cladistic interpretation of chromosome painting and genome sequence assembly data
-
Robinson TJ, Ruiz-Herrera A: Defining the ancestral eutherian karyotype: a cladistic interpretation of chromosome painting and genome sequence assembly data. Chromosome Res 16:1133-1141 (2008).
-
(2008)
Chromosome Res.
, vol.16
, pp. 1133-1141
-
-
Robinson, T.J.1
Ruiz-Herrera, A.2
-
20
-
-
3242669940
-
Cross-species chromosome painting in the golden mole and elephant-shrew: Support for the mammalian clades Afrotheria and Afroinsectiphillia but not Afroinsectivora
-
Robinson TJ, Fu B, Ferguson-Smith MA, Yang F: Cross-species chromosome painting in the golden mole and elephant-shrew: support for the mammalian clades Afrotheria and Afroinsectiphillia but not Afroinsectivora. Proc Biol Sci 271:1477-1484 (2004).
-
(2004)
Proc. Biol. Sci.
, vol.271
, pp. 1477-1484
-
-
Robinson, T.J.1
Fu, B.2
Ferguson-Smith, M.A.3
Yang, F.4
-
21
-
-
0033793019
-
Rare genomic changes as a tool for phylogenetics
-
Rokas A, Holland PW: Rare genomic changes as a tool for phylogenetics. Trends Ecol Evol 15:454-459 (2000).
-
(2000)
Trends Ecol. Evol.
, vol.15
, pp. 454-459
-
-
Rokas, A.1
Holland, P.W.2
-
22
-
-
0028306521
-
Comparative chromosome painting discloses homologous segments in distantly related mammals
-
Scherthan H, Cremer T, Arnason U, Lima-de-Faria A, Weier HU, et al: Comparative chromosome painting discloses homologous segments in distantly related mammals. Nature Genet 6:342-347 (1994).
-
(1994)
Nature Genet.
, vol.6
, pp. 342-347
-
-
Scherthan, H.1
Cremer, T.2
Arnason, U.3
Lima-de-Faria, A.4
Weier, H.U.5
-
23
-
-
0015258469
-
The use of proteolytic enzymes for the mapping of structural rearrangements in the chromosomes of man
-
Seabright M: The use of proteolytic enzymes for the mapping of structural rearrangements in the chromosomes of man. Chromosoma 36:204-210 (1972).
-
(1972)
Chromosoma
, vol.36
, pp. 204-210
-
-
Seabright, M.1
-
25
-
-
0015423706
-
A simple technique for demonstrating centromeric heterochromatin
-
Sumner AT: A simple technique for demonstrating centromeric heterochromatin. Exp Cell Res 75:304-306 (1972).
-
(1972)
Exp. Cell. Res.
, vol.75
, pp. 304-306
-
-
Sumner, A.T.1
-
26
-
-
33746590373
-
The ancestral eutherian karyotype is present in Xenarthra
-
Svartman M, Stone G, Stanyon R: The ancestral eutherian karyotype is present in Xenarthra. PLoS Genet 2: e109 (2006).
-
(2006)
PLoS Genet.
, vol.2
-
-
Svartman, M.1
Stone, G.2
Stanyon, R.3
-
27
-
-
0026587345
-
Cytogenetic analysis by chromosome painting using DOP-PCR amplified flow-sorted chromosomes
-
Telenius H, Pelmear AH, Tunnacliffe A, Carter NP, Behmel A, et al: Cytogenetic analysis by chromosome painting using DOP-PCR amplified flow-sorted chromosomes. Genes Chromosomes Cancer 4:257-263 (1992).
-
(1992)
Genes Chromosomes Cancer
, vol.4
, pp. 257-263
-
-
Telenius, H.1
Pelmear, A.H.2
Tunnacliffe, A.3
Carter, N.P.4
Behmel, A.5
-
28
-
-
0033085021
-
The virtues of gaps: Xenarthran (Edentate) monophyly supported by a unique deletion in alpha A-crystallin
-
van Dijk MA, Paradis E, Catzeflis F, de Jong WW: The virtues of gaps: xenarthran (Edentate) monophyly supported by a unique deletion in alpha A-crystallin. Syst Biol 48:94-106 (1999).
-
(1999)
Syst. Biol.
, vol.48
, pp. 94-106
-
-
Van Dijk, M.A.1
Paradis, E.2
Catzeflis, F.3
De Jong, W.W.4
-
29
-
-
6344262106
-
LINE-1 distribution in Afrotheria and Xenarthra: Implications for understanding the evolution of LINE-1 in eutherian genomes
-
Waters PD, Dobigny G, Pardini AT, Robinson TJ: LINE-1 distribution in Afrotheria and Xenarthra: implications for understanding the evolution of LINE-1 in eutherian genomes. Chromosoma 113:137-144 (2004).
-
(2004)
Chromosoma
, vol.113
, pp. 137-144
-
-
Waters, P.D.1
Dobigny, G.2
Pardini, A.T.3
Robinson, T.J.4
-
30
-
-
55249100313
-
Evolutionary history of LINE-1 in the major clades of placental mammals
-
Waters PD, Dobigny G, Waddell PJ, Robinson TJ: Evolutionary history of LINE-1 in the major clades of placental mammals. PLoS One 2: e158 (2007).
-
(2007)
PLoS One
, vol.2
-
-
Waters, P.D.1
Dobigny, G.2
Waddell, P.J.3
Robinson, T.J.4
-
31
-
-
0000819569
-
Systematics, distribution, ecology, and conservation of South American Edentates
-
Mares MA, Genoways HH eds:, University of Pittsburgh Press, Pittsburgh
-
Wetzel RM: Systematics, distribution, ecology, and conservation of South American Edentates, in Mares MA, Genoways HH (eds): Mammalian Biology in South America (University of Pittsburgh Press, Pittsburgh 1982).
-
(1982)
Mammalian Biology in South America
-
-
Wetzel, R.M.1
-
32
-
-
0030845802
-
Conservation of human vs. Feline genome organization revealed by reciprocal chromosome painting
-
Wienberg J, Stanyon R, Nash WG, O'Brien P C M, Yang F, et al: Conservation of human vs. Feline genome organization revealed by reciprocal chromosome painting. Cytogenet Cell Genet 77:211-217 (1997).
-
(1997)
Cytogenet. Cell. Genet.
, vol.77
, pp. 211-217
-
-
Wienberg, J.1
Stanyon, R.2
Nash, W.G.3
O'Brien, P.C.M.4
Yang, F.5
-
33
-
-
31344464468
-
New families of site-specific repetitive DNA sequences that comprise constitutive heterochromatin of the Syrian hamster (Mesocricetus auratus, Cricetinae, Rodentia)
-
Yamada K, Kamimura E, Kondo M, Tsuchiya K, Nishida-Umehara C, et al: New families of site-specific repetitive DNA sequences that comprise constitutive heterochromatin of the Syrian hamster (Mesocricetus auratus, Cricetinae, Rodentia). Chromosoma 115:36-49 (2006).
-
(2006)
Chromosoma
, vol.115
, pp. 36-49
-
-
Yamada, K.1
Kamimura, E.2
Kondo, M.3
Tsuchiya, K.4
Nishida-Umehara, C.5
-
35
-
-
0029018149
-
A comparative study of karyotypes of muntjacs by chromosome painting
-
Yang F, Carter NP, Shi L, Ferguson-Smith MA: A comparative study of karyotypes of muntjacs by chromosome painting. Chromosoma 103:642-652 (1995).
-
(1995)
Chromosoma
, vol.103
, pp. 642-652
-
-
Yang, F.1
Carter, N.P.2
Shi, L.3
Ferguson-Smith, M.A.4
-
36
-
-
0033373189
-
A complete comparative chromosome map for the dog, red fox, and human and its integration with canine genetic maps
-
Yang F, O'Brien PC, Milne BS, Graphodatsky AS, Solanky N, et al: A complete comparative chromosome map for the dog, red fox, and human and its integration with canine genetic maps. Genomics 62:189-202 (1999).
-
(1999)
Genomics
, vol.62
, pp. 189-202
-
-
Yang, F.1
O'Brien, P.C.2
Milne, B.S.3
Graphodatsky, A.S.4
Solanky, N.5
-
37
-
-
0033864186
-
Reciprocal chromosome painting illuminates the history of genome evolution of the domestic cat, dog and human
-
Yang F, Graphodatsky AS, O'Brien P C M, Colabella A, Solanky N, et al: Reciprocal chromosome painting illuminates the history of genome evolution of the domestic cat, dog and human. Chromosome Res 8:393-404 (2000).
-
(2000)
Chromosome Res.
, vol.8
, pp. 393-404
-
-
Yang, F.1
Graphodatsky, A.S.2
O'Brien, P.C.M.3
Colabella, A.4
Solanky, N.5
-
38
-
-
0037417981
-
Reciprocal chromosome painting among human, aardvark, and elephant (superorder Afrotheria) reveals the likely eutherian ancestral karyotype
-
Yang F, Alkalaeva EZ, Perelman PL, Pardini AT, Harrison WR, et al: Reciprocal chromosome painting among human, aardvark, and elephant (superorder Afrotheria) reveals the likely eutherian ancestral karyotype. Proc Natl Acad Sci USA 100:1062-1066 (2003).
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 1062-1066
-
-
Yang, F.1
Alkalaeva, E.Z.2
Perelman, P.L.3
Pardini, A.T.4
Harrison, W.R.5
-
39
-
-
0442313539
-
Refined genome-wide comparative map of the domestic horse, donkey and human based on cross-species chromosome painting: Insight into the occasional fertility of mules
-
Yang F, Fu B, O'Brien PC, Nie W, Ryder OA, et al: Refined genome-wide comparative map of the domestic horse, donkey and human based on cross-species chromosome painting: insight into the occasional fertility of mules. Chromosome Res 12:65-76 (2004).
-
(2004)
Chromosome Res.
, vol.12
, pp. 65-76
-
-
Yang, F.1
Fu, B.2
O'Brien, P.C.3
Nie, W.4
Ryder, O.A.5
-
40
-
-
33646037989
-
Comparative genome maps of the pangolin, hedgehog, sloth, anteater and human revealed by cross-species chromosome painting: Further insight into the ancestral karyotype and genome evolution of eutherian mammals
-
Yang F, Graphodatsky AS, Li T, Fu B, Dobigny G, et al: Comparative genome maps of the pangolin, hedgehog, sloth, anteater and human revealed by cross-species chromosome painting: further insight into the ancestral karyotype and genome evolution of eutherian mammals. Chromosome Res 14:283-296 (2006).
-
(2006)
Chromosome Res.
, vol.14
, pp. 283-296
-
-
Yang, F.1
Graphodatsky, A.S.2
Li, T.3
Fu, B.4
Dobigny, G.5
-
41
-
-
79960842821
-
Generation of paint probes by flow-sorted and microdissected chromosomes
-
Liehr T ed:, Application Guide Springer-Verlag, Berlin
-
Yang F, Trifonov V, Ng BL, Kosyakova N, Carter NP: Generation of paint probes by flow-sorted and microdissected chromosomes, in Liehr T (ed): Fluorescence In Situ Hybridization (FISH) - Application Guide (Springer-Verlag, Berlin, 2009).
-
(2009)
Fluorescence in Situ Hybridization (FISH)
-
-
Yang, F.1
Trifonov, V.2
Ng, B.L.3
Kosyakova, N.4
Carter, N.P.5
|