-
1
-
-
0036950351
-
Single nucleotide polymorphisms in innate immunity genes: abundant variation and potential role in complex human disease
-
Lazarus, R., Vercelli, D., Palmer, L.J., Klimecki, W.J., Silverman, E.K., Richter, B., Riva, A., Ramoni, M., Martinez, F.D., Weiss, S.T. et al. (2002) Single nucleotide polymorphisms in innate immunity genes: abundant variation and potential role in complex human disease. Immunol. Rev., 190, 9-25.
-
(2002)
Immunol. Rev.
, vol.190
, pp. 9-25
-
-
Lazarus, R.1
Vercelli, D.2
Palmer, L.J.3
Klimecki, W.J.4
Silverman, E.K.5
Richter, B.6
Riva, A.7
Ramoni, M.8
Martinez, F.D.9
Weiss, S.T.10
-
2
-
-
33845631591
-
Aspects of genetic susceptibility to human infectious diseases
-
Hill, A.V. (2006) Aspects of genetic susceptibility to human infectious diseases. Annu. Rev. Genet., 40, 469-486.
-
(2006)
Annu. Rev. Genet.
, vol.40
, pp. 469-486
-
-
Hill, A.V.1
-
3
-
-
39549123040
-
Toll-like receptor polymorphisms and susceptibility to human disease
-
Misch, E.A. and Hawn, T.R. (2008) Toll-like receptor polymorphisms and susceptibility to human disease. Clin. Sci. (Lond.), 114, 347-360.
-
(2008)
Clin. Sci. (Lond.)
, vol.114
, pp. 347-360
-
-
Misch, E.A.1
Hawn, T.R.2
-
4
-
-
0035061538
-
IRF family of transcription factors as regulators of host defense
-
Taniguchi, T., Ogasawara, K., Takaoka, A. and Tanaka, N. (2001) IRF family of transcription factors as regulators of host defense. Annu. Rev. Immunol., 19, 623-655.
-
(2001)
Annu. Rev. Immunol.
, vol.19
, pp. 623-655
-
-
Taniguchi, T.1
Ogasawara, K.2
Takaoka, A.3
Tanaka, N.4
-
5
-
-
42649114059
-
The IRF family transcription factors in immunity and oncogenesis
-
Tamura, T., Yanai, H., Savitsky, D. and Taniguchi, T. (2008) The IRF family transcription factors in immunity and oncogenesis. Annu. Rev. Immunol., 26, 535-584.
-
(2008)
Annu. Rev. Immunol.
, vol.26
, pp. 535-584
-
-
Tamura, T.1
Yanai, H.2
Savitsky, D.3
Taniguchi, T.4
-
6
-
-
71049192398
-
Molecular mechanisms of IFN-gamma to up-regulate MHC class I antigen processing and presentation
-
Zhou, F. (2009) Molecular mechanisms of IFN-gamma to up-regulate MHC class I antigen processing and presentation. Int. Rev. Immunol., 28, 239-260.
-
(2009)
Int. Rev. Immunol.
, vol.28
, pp. 239-260
-
-
Zhou, F.1
-
7
-
-
34248531947
-
Polymorphisms in IRF-1 associated with resistance to HIV-1 infection in highly exposed uninfected Kenyan sex workers
-
Ball, T.B., Ji, H., Kimani, J., McLaren, P., Marlin, C., Hill, A.V. and Plummer, F.A. (2007) Polymorphisms in IRF-1 associated with resistance to HIV-1 infection in highly exposed uninfected Kenyan sex workers. AIDS, 21, 1091-1101.
-
(2007)
AIDS
, vol.21
, pp. 1091-1101
-
-
Ball, T.B.1
Ji, H.2
Kimani, J.3
McLaren, P.4
Marlin, C.5
Hill, A.V.6
Plummer, F.A.7
-
8
-
-
77950809872
-
Reduced HIV-1 long terminal repeat transcription in subjects with protective interferon regulatory factor-1 genotype: a potential mechanism mediating resistance to infection by HIV-1
-
Ji, H., Ball, T.B., Ao, Z., Kimani, J., Yao, X. and Plummer, F.A. (2010) Reduced HIV-1 long terminal repeat transcription in subjects with protective interferon regulatory factor-1 genotype: a potential mechanism mediating resistance to infection by HIV-1. Scand. J. Infect. Dis., 42, 389-394.
-
(2010)
Scand. J. Infect. Dis.
, vol.42
, pp. 389-394
-
-
Ji, H.1
Ball, T.B.2
Ao, Z.3
Kimani, J.4
Yao, X.5
Plummer, F.A.6
-
9
-
-
33747056830
-
Interferon regulatory factor-1 promoter polymorphism and the outcome of hepatitis C virus infection
-
Wietzke-Braun, P., Maouzi, A.B., Manhardt, L.B., Bickeboller, H., Ramadori, G. and Mihm, S. (2006) Interferon regulatory factor-1 promoter polymorphism and the outcome of hepatitis C virus infection. Eur. J. Gastroenterol. Hepatol., 18, 991-997.
-
(2006)
Eur. J. Gastroenterol. Hepatol.
, vol.18
, pp. 991-997
-
-
Wietzke-Braun, P.1
Maouzi, A.B.2
Manhardt, L.B.3
Bickeboller, H.4
Ramadori, G.5
Mihm, S.6
-
10
-
-
0036376634
-
The detection of IRF-1 promoter polymorphisms and their possible contribution to T helper 1 response in chronic hepatitis C
-
Saito, H., Tada, S., Wakabayashi, K., Nakamoto, N., Takahashi, M., Nakamura, M., Ebinuma, H. and Ishii, H. (2002) The detection of IRF-1 promoter polymorphisms and their possible contribution to T helper 1 response in chronic hepatitis C. J. Interferon Cytokine Res., 22, 693-700.
-
(2002)
J. Interferon Cytokine Res.
, vol.22
, pp. 693-700
-
-
Saito, H.1
Tada, S.2
Wakabayashi, K.3
Nakamoto, N.4
Takahashi, M.5
Nakamura, M.6
Ebinuma, H.7
Ishii, H.8
-
11
-
-
40749111024
-
Multiple sclerosis and hepatitis C virus infection are associated with single nucleotide polymorphisms in interferon pathway genes
-
Fortunato, G., Calcagno, G., Bresciamorra, V., Salvatore, E., Filla, A., Capone, S., Liguori, R., Borelli, S., Gentile, I., Borrelli, F. et al. (2008) Multiple sclerosis and hepatitis C virus infection are associated with single nucleotide polymorphisms in interferon pathway genes. J. Interferon Cytokine Res., 28, 141-152.
-
(2008)
J. Interferon Cytokine Res.
, vol.28
, pp. 141-152
-
-
Fortunato, G.1
Calcagno, G.2
Bresciamorra, V.3
Salvatore, E.4
Filla, A.5
Capone, S.6
Liguori, R.7
Borelli, S.8
Gentile, I.9
Borrelli, F.10
-
12
-
-
0037381021
-
Wanted: regulatory SNPs
-
Hudson, T.J. (2003) Wanted: regulatory SNPs. Nat. Genet., 33, 439-440.
-
(2003)
Nat. Genet.
, vol.33
, pp. 439-440
-
-
Hudson, T.J.1
-
13
-
-
29644433004
-
The importance and identification of regulatory polymorphisms and their mechanisms of action
-
Buckland, P.R. (2006) The importance and identification of regulatory polymorphisms and their mechanisms of action. Biochim. Biophys. Acta, 1762, 17-28.
-
(2006)
Biochim. Biophys. Acta
, vol.1762
, pp. 17-28
-
-
Buckland, P.R.1
-
15
-
-
70449641057
-
Progression through the RNA polymerase II CTD cycle
-
Buratowski, S. (2009) Progression through the RNA polymerase II CTD cycle. Mol. Cell, 36, 541-546.
-
(2009)
Mol. Cell
, vol.36
, pp. 541-546
-
-
Buratowski, S.1
-
16
-
-
0037381011
-
In vivo characterization of regulatory polymorphisms by allele-specific quantification of RNA polymerase loading
-
Knight, J.C., Keating, B.J., Rockett, K.A. and Kwiatkowski, D.P. (2003) In vivo characterization of regulatory polymorphisms by allele-specific quantification of RNA polymerase loading. Nat. Genet., 33, 469-475.
-
(2003)
Nat. Genet.
, vol.33
, pp. 469-475
-
-
Knight, J.C.1
Keating, B.J.2
Rockett, K.A.3
Kwiatkowski, D.P.4
-
17
-
-
33746393852
-
Influence of human genome polymorphism on gene expression
-
Review
-
Pastinen, T., Ge, B. and Hudson, T.J. (2006) Influence of human genome polymorphism on gene expression. Hum. Mol. Genet., 15(Review Issue 1), R9-R16.
-
(2006)
Hum. Mol. Genet.
, vol.15
, Issue.1
-
-
Pastinen, T.1
Ge, B.2
Hudson, T.J.3
-
18
-
-
70349237605
-
Functional impact of endotoxin receptor CD14 polymorphisms on transcriptional activity
-
Mertens, J., Bregadze, R., Mansur, A., Askar, E., Bickeboller, H., Ramadori, G. and Mihm, S. (2009) Functional impact of endotoxin receptor CD14 polymorphisms on transcriptional activity. J. Mol. Med., 87, 815-824.
-
(2009)
J. Mol. Med.
, vol.87
, pp. 815-824
-
-
Mertens, J.1
Bregadze, R.2
Mansur, A.3
Askar, E.4
Bickeboller, H.5
Ramadori, G.6
Mihm, S.7
-
19
-
-
37249015899
-
Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7
-
Chapman, R.D., Heidemann, M., Albert, T.K., Mailhammer, R., Flatley, A., Meisterernst, M., Kremmer, E. and Eick, D. (2007) Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7. Science, 318, 1780-1782.
-
(2007)
Science
, vol.318
, pp. 1780-1782
-
-
Chapman, R.D.1
Heidemann, M.2
Albert, T.K.3
Mailhammer, R.4
Flatley, A.5
Meisterernst, M.6
Kremmer, E.7
Eick, D.8
-
20
-
-
37249063572
-
Serine-7 of the RNA polymerase II CTD is specifically required for snRNA gene expression
-
Egloff, S., O'Reilly, D., Chapman, R.D., Taylor, A., Tanzhaus, K., Pitts, L., Eick, D. and Murphy, S. (2007) Serine-7 of the RNA polymerase II CTD is specifically required for snRNA gene expression. Science, 318, 1777-1779.
-
(2007)
Science
, vol.318
, pp. 1777-1779
-
-
Egloff, S.1
O'Reilly, D.2
Chapman, R.D.3
Taylor, A.4
Tanzhaus, K.5
Pitts, L.6
Eick, D.7
Murphy, S.8
-
21
-
-
65549156025
-
TFIIH kinase places bivalent marks on the carboxy-terminal domain of RNA polymerase II
-
Akhtar, M.S., Heidemann, M., Tietjen, J.R., Zhang, D.W., Chapman, R.D., Eick, D. and Ansari, A.Z. (2009) TFIIH kinase places bivalent marks on the carboxy-terminal domain of RNA polymerase II. Mol. Cell, 34, 387-393.
-
(2009)
Mol. Cell
, vol.34
, pp. 387-393
-
-
Akhtar, M.S.1
Heidemann, M.2
Tietjen, J.R.3
Zhang, D.W.4
Chapman, R.D.5
Eick, D.6
Ansari, A.Z.7
-
22
-
-
34447098370
-
A chromatin landmark and transcription initiation at most promoters in human cells
-
Guenther, M.G., Levine, S.S., Boyer, L.A., Jaenisch, R. and Young, R.A. (2007) A chromatin landmark and transcription initiation at most promoters in human cells. Cell, 130, 77-88.
-
(2007)
Cell
, vol.130
, pp. 77-88
-
-
Guenther, M.G.1
Levine, S.S.2
Boyer, L.A.3
Jaenisch, R.4
Young, R.A.5
-
23
-
-
36549061004
-
RNA polymerase is poised for activation across the genome
-
Muse, G.W., Gilchrist, D.A., Nechaev, S., Shah, R., Parker, J.S., Grissom, S.F., Zeitlinger, J. and Adelman, K. (2007) RNA polymerase is poised for activation across the genome. Nat. Genet., 39, 1507-1511.
-
(2007)
Nat. Genet.
, vol.39
, pp. 1507-1511
-
-
Muse, G.W.1
Gilchrist, D.A.2
Nechaev, S.3
Shah, R.4
Parker, J.S.5
Grissom, S.F.6
Zeitlinger, J.7
Adelman, K.8
-
24
-
-
67649648237
-
Control of inducible gene expression by signal-dependent transcriptional elongation
-
Hargreaves, D.C., Horng, T. and Medzhitov, R. (2009) Control of inducible gene expression by signal-dependent transcriptional elongation. Cell, 138, 129-145.
-
(2009)
Cell
, vol.138
, pp. 129-145
-
-
Hargreaves, D.C.1
Horng, T.2
Medzhitov, R.3
-
25
-
-
0035029638
-
Interferon regulatory factor 1 promoter polymorphism and response to type 1 interferon
-
Saito, H., Tada, S., Ebinuma, H., Wakabayashi, K., Takagi, T., Saito, Y., Nakamoto, N., Kurita, S. and Ishii, H. (2001) Interferon regulatory factor 1 promoter polymorphism and response to type 1 interferon. J. Cell. Biochem., 81(Suppl. 36), 191-200.
-
(2001)
J. Cell. Biochem.
, vol.81
, Issue.SUPPL. 36
, pp. 191-200
-
-
Saito, H.1
Tada, S.2
Ebinuma, H.3
Wakabayashi, K.4
Takagi, T.5
Saito, Y.6
Nakamoto, N.7
Kurita, S.8
Ishii, H.9
-
26
-
-
40949137893
-
IRF-1 gene variations influence IgE regulation and atopy
-
Schedel, M., Pinto, L.A., Schaub, B., Rosenstiel, P., Cherkasov, D., Cameron, L., Klopp, N., Illig, T., Vogelberg, C., Weiland, S.K. et al. (2008) IRF-1 gene variations influence IgE regulation and atopy. Am. J. Respir. Crit. Care Med., 177, 613-621.
-
(2008)
Am. J. Respir. Crit. Care Med.
, vol.177
, pp. 613-621
-
-
Schedel, M.1
Pinto, L.A.2
Schaub, B.3
Rosenstiel, P.4
Cherkasov, D.5
Cameron, L.6
Klopp, N.7
Illig, T.8
Vogelberg, C.9
Weiland, S.K.10
-
27
-
-
78149234795
-
Increased IRF-1 and IFN-a gene expression in chronic hepatitis C G-300A IRF-1 promoter polymorphism A allele carriers
-
Aidery, P., Ramadori, G. and Mihm, S. (2007) Increased IRF-1 and IFN-a gene expression in chronic hepatitis C G-300A IRF-1 promoter polymorphism A allele carriers. Hepatology, 46, 448A.
-
(2007)
Hepatology
, vol.46
-
-
Aidery, P.1
Ramadori, G.2
Mihm, S.3
-
28
-
-
29644446630
-
Mapping common regulatory variants to human haplotypes
-
Pastinen, T., Ge, B., Gurd, S., Gaudin, T., Dore, C., Lemire, M., Lepage, P., Harmsen, E. and Hudson, T.J. (2005) Mapping common regulatory variants to human haplotypes. Hum. Mol. Genet., 14, 3963-3971.
-
(2005)
Hum. Mol. Genet.
, vol.14
, pp. 3963-3971
-
-
Pastinen, T.1
Ge, B.2
Gurd, S.3
Gaudin, T.4
Dore, C.5
Lemire, M.6
Lepage, P.7
Harmsen, E.8
Hudson, T.J.9
-
29
-
-
40149090710
-
Differential allelic expression in the human genome: a robust approach to identify genetic and epigenetic cis-acting mechanisms regulating gene expression
-
Serre, D., Gurd, S., Ge, B., Sladek, R., Sinnett, D., Harmsen, E., Bibikova, M., Chudin, E., Barker, D.L., Dickinson, T. et al. (2008) Differential allelic expression in the human genome: a robust approach to identify genetic and epigenetic cis-acting mechanisms regulating gene expression. PLoS Genet., 4, e1000006.
-
(2008)
PLoS Genet.
, vol.4
-
-
Serre, D.1
Gurd, S.2
Ge, B.3
Sladek, R.4
Sinnett, D.5
Harmsen, E.6
Bibikova, M.7
Chudin, E.8
Barker, D.L.9
Dickinson, T.10
-
30
-
-
5444256188
-
Allele-specific gene expression differences in humans
-
Review
-
Buckland, P.R. (2004) Allele-specific gene expression differences in humans. Hum. Mol. Genet., 13(Review Issue 2), R255-R260.
-
(2004)
Hum. Mol. Genet.
, vol.13
, Issue.2
-
-
Buckland, P.R.1
-
31
-
-
0036855185
-
Abundant raw material for cis-regulatory evolution in humans
-
Rockman, M.V. and Wray, G.A. (2002) Abundant raw material for cis-regulatory evolution in humans. Mol. Biol. Evol., 19, 1991-2004.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1991-2004
-
-
Rockman, M.V.1
Wray, G.A.2
-
32
-
-
34548409926
-
An SNP in the 5'-UTR of GDF5 is associated with osteoarthritis susceptibility in Europeans and with in vivo differences in allelic expression in articular cartilage
-
Southam, L., Rodriguez-Lopez, J., Wilkins, J.M., Pombo-Suarez, M., Snelling, S., Gomez-Reino, J.J., Chapman, K., Gonzalez, A. and Loughlin, J. (2007) An SNP in the 5'-UTR of GDF5 is associated with osteoarthritis susceptibility in Europeans and with in vivo differences in allelic expression in articular cartilage. Hum. Mol. Genet., 16, 2226-2232.
-
(2007)
Hum. Mol. Genet.
, vol.16
, pp. 2226-2232
-
-
Southam, L.1
Rodriguez-Lopez, J.2
Wilkins, J.M.3
Pombo-Suarez, M.4
Snelling, S.5
Gomez-Reino, J.J.6
Chapman, K.7
Gonzalez, A.8
Loughlin, J.9
-
33
-
-
9444271770
-
Allelic expression of APOE in human brain: effects of epsilon status and promoter haplotypes
-
Bray, N.J., Jehu, L., Moskvina, V., Buxbaum, J.D., Dracheva, S., Haroutunian, V., Williams, J., Buckland, P.R., Owen, M.J. and O'Donovan, M.C. (2004) Allelic expression of APOE in human brain: effects of epsilon status and promoter haplotypes. Hum. Mol. Genet., 13, 2885-2892.
-
(2004)
Hum. Mol. Genet.
, vol.13
, pp. 2885-2892
-
-
Bray, N.J.1
Jehu, L.2
Moskvina, V.3
Buxbaum, J.D.4
Dracheva, S.5
Haroutunian, V.6
Williams, J.7
Buckland, P.R.8
Owen, M.J.9
O'Donovan, M.C.10
-
34
-
-
77952497530
-
Allelic expression imbalance at high-density lipoprotein cholesterol locus MMAB-MVK
-
Fogarty, M.P., Xiao, R., Prokunina-Olsson, L., Scott, L.J. and Mohlke, K.L. (2010) Allelic expression imbalance at high-density lipoprotein cholesterol locus MMAB-MVK. Hum. Mol. Genet., 19, 1921-1929.
-
(2010)
Hum. Mol. Genet.
, vol.19
, pp. 1921-1929
-
-
Fogarty, M.P.1
Xiao, R.2
Prokunina-Olsson, L.3
Scott, L.J.4
Mohlke, K.L.5
-
35
-
-
0037119584
-
Allelic variation in human gene expression
-
Yan, H., Yuan, W., Velculescu, V.E., Vogelstein, B. and Kinzler, K.W. (2002) Allelic variation in human gene expression. Science, 297, 1143.
-
(2002)
Science
, vol.297
, pp. 1143
-
-
Yan, H.1
Yuan, W.2
Velculescu, V.E.3
Vogelstein, B.4
Kinzler, K.W.5
-
36
-
-
51149120433
-
Intron-mediated regulation of gene expression
-
Rose, A.B. (2008) Intron-mediated regulation of gene expression. Curr. Top Microbiol. Immunol., 326, 277-290.
-
(2008)
Curr. Top Microbiol. Immunol.
, vol.326
, pp. 277-290
-
-
Rose, A.B.1
-
37
-
-
4344705233
-
Interferon type I gene expression in chronic hepatitis C
-
Mihm, S., Frese, M., Meier, V., Wietzke-Braun, P., Scharf, J.G., Bartenschlager, R. and Ramadori, G. (2004) Interferon type I gene expression in chronic hepatitis C. Lab. Invest., 84, 1148-1159.
-
(2004)
Lab. Invest.
, vol.84
, pp. 1148-1159
-
-
Mihm, S.1
Frese, M.2
Meier, V.3
Wietzke-Braun, P.4
Scharf, J.G.5
Bartenschlager, R.6
Ramadori, G.7
-
38
-
-
0141815505
-
Investigating RNA polymerase II carboxyl-terminal domain (CTD) phosphorylation
-
Palancade, B. and Bensaude, O. (2003) Investigating RNA polymerase II carboxyl-terminal domain (CTD) phosphorylation. Eur. J. Biochem., 270, 3859-3870.
-
(2003)
Eur. J. Biochem.
, vol.270
, pp. 3859-3870
-
-
Palancade, B.1
Bensaude, O.2
-
39
-
-
13444269543
-
Haploview: analysis and visualization of LD and haplotype maps
-
Barrett, J.C., Fry, B., Maller, J. and Daly, M.J. (2005) Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics, 21, 263-265.
-
(2005)
Bioinformatics
, vol.21
, pp. 263-265
-
-
Barrett, J.C.1
Fry, B.2
Maller, J.3
Daly, M.J.4
|