Genetic diversity in Vietnamese melon landraces revealed by the analyses of morphological traits and nuclear and cytoplasmic molecular markers

Breeding Science

Volumn 60, Issue 3, 2010, Pages 255-266

  Nhi, Phan Thi Phuong ^a,b   Akashi, Yukari ^a   Hang, Tran Thi Minh ^c   Tanaka, Katsunori ^d   Aierken, Yasheng ^a   Yamamoto, Tatsuya ^a   Nishida, Hidetaka ^a   Long, Chunlin ^e   Kato, Kenji ^a  

^a OKAYAMA UNIVERSITY   (Japan)

^b HUE UNIVERSITY   (Viet Nam)

^c VIETNAM NATIONAL UNIVERSITY OF AGRICULTURE   (Viet Nam)

^d RESEARCH INSTITUTE FOR HUMANITY AND NATURE   (Japan)

^e KUNMING INSTITUTE OF BOTANY   (China)

Author keywords

Chloroplast genome; Conomon; Cucumis melo; Genetic diversity; RAPD; SSR; Vietnam

Indexed keywords

CUCUMIS; CUCUMIS MELO; MOMORDICA; THERMOANAEROBACTERIALES;

EID: 78049421764     PISSN: 13447610     EISSN: 13473735     Source Type: Journal    
DOI: 10.1270/jsbbs.60.255     Document Type: Article

References (35)

1. Aierken, Y., Y. Akashi, P.T.P. Nhi, Y. Halidan, K. Tanaka, B. Long, H. Nishida, C. Long, M.Z. Wu and K. Kato (2010) Molecular analysis of the genetic diversity of Chinese Hami melon and its relationship to the melon germplasm from Central and South Asia. J. Jpn. Soc. Hort. Sci. (in press)
2. Akashi, Y., S. Shiomi, Y. Kubo, M. Masuda and K. Kato (2001) Microsatellite and CAPS markers for ethylene-related genes, 1- aminocyclopropane-1-carboxylic acid (ACC) synthase and ACC oxidase genes, and their variation in melon (Cucumis melo L.). Breed. Sci. 51: 107-112.
3. Akashi, Y., N. Fukuda, T. Wako, M. Masuda and K. Kato (2002) Genetic variation and phylogenetic relationships in East and South Asian melon, Cucumis melo L., based on the analysis of five isozymes. Euphytica 125: 385-396.
4. Akashi, Y., K. Tanaka, H. Nishida and K. Kato (2006) Genetic diversity and phylogenetic relationship among melon accessions from Africa and Asia revealed by RAPD analysis. Cucurbitaceae 2006: 317-325.
5. Apostol, B.L., W.C.I.V. Black, B.R. Miller, P. Reiter and B.J. Beaty (1993) Estimation of the number of full sibling families at an oviposition site using RAPD-PCR markers: applications to the mosquito Aedes aegypti. Theor. Appl. Genet. 86: 991-1000.
6. Boualem, A., M. Fergany, R. Fernandez, C. Troadec, A. Martin, H. Morin, M.A. Sari, F. Collin, J.M. Flowers, M. Pitrat et al. (2008) A conserved mutation in an ethylene biosynthesis enzyme leads to andromonoecy in melons. Science 321: 836-838.
7. Chung, S.M. and J.E. Staub (2003) The development and evaluation of consensus chloroplast primer pairs that possess highly variable sequence regions in a diverse array of plant taxa. Theor. Appl. Genet. 107: 757-767.
8. Daryono, B.S., S. Somowiyarjo and K.T. Natsuaki (2003) New source of resistance to cucumber mosaic virus in melon. SABRAO Journal 35: 19-26.
9. Fujishita, N. (1983) Genetic diversity and phylogenetic differentiation in melon. Curr. Top. Plant Breed. 24: 3-21.
10. Fukino, N., Y. Sakata, M. Kunihisa and S. Matsumoto (2007) Characterisation of novel simple sequence repeat (SSR) markers for melon (Cucumis melo L.) and their use for genotype identification. J. Hort. Sci. Biotechnol. 82: 330-334.
11. Hammer, K., P. Hanelt and P. Perrino (1986) Carosello and the taxonomy of Cucumis melo L. especially of its vegetable races. Kulturpflanze 34: 249-259.
12. Jeffrey, C. (1980) A review of the Cucurbitaceae. Bot. J. Linn. Soc. 81: 233-247.
13. Kato, K., H. Yoshino, S. Matsuura, Y. Akashi and K. Tanaka (2006) Cucurbitaceae crop. In: Takeda, K. (ed.) Genetic Assay and Study of Crop Germplasm in and around China, 3rd edn. Okayama University, Okayama, pp. 69-85.
14. López-Sesé, A.I., J.E. Staub and M.L. Gómez Guillamón (2003) Genetic analysis of Spanish melon (Cucumis melo L.) germplasm using a standardized molecular-marker array and geographically diverse reference accessions. Theor. Appl. Genet. 108: 41-52.
15. McCreight, J.D., J.E. Staub, A.I. López-Sesé and S. Chung (2004) Isozyme variation in Indian and Chinese melon (Cucumis melo L.) germplasm collection. J. Am. Soc. Hortic. Sci. 129: 811-818.
16. Mliki, A., J.E. Staub, Z.Y. Sun and A. Ghorbel (2001) Genetic diversity in melon (Cucumis melo L.): An evaluation of African germplasm. Genet. Resour. Crop Evol. 48: 587-597.
17. Monforte, A.J., J. Garcia-Mas and P. Arús (2003) Genetic variability in melon based on microsatellite variation. Plant Breed. 122: 153-157.
18. Munger, H.M. and R.W. Robinson (1991) Nomenclature of Cucumis melo L. Cucurbit Genet. Coop. Rep. 14: 43-44.
19. Murray, G.C. and W.F. Thompson (1980) Rapid isolation of high molecular weight DNA. Nucleic Acids Res. 8: 4321-4325.
20. Nakamura, I., N. Kameya, Y. Kato, S.I. Yamanaka, H. Jomori and Y. Sato (1997) A proposal for identifying the short ID sequence which addresses the plastid subtype of higher plants. Breed. Sci. 47: 385-388.
21. Naudin, C. (1859) Especes et des varietes du genre Cucumis. Ann. Sci. Nat. 11: 5-87.
22. Nei, M. (1972) Genetic distance between populations. Am. Nat. 106: 283-292.
23. Pech, J.C., A. Bernadac, M. Bouzayen, A. Latche, C. Dogimont and M. Pitrat (2007) Biotechnology in agriculture and forestry, Vol. 60, Transgenic crops V. In: Pua, E.C. and M.R. Davey (eds.) Melon, Spinger-Verlag, Berlin, Heidelberg, pp. 209-240.
24. Pitrat, M., P. Hanelt and K. Hammer (2000) Some comments on infraspecific classification of cultivars of melon. Proc. Cucurbitaceae 2000: 29-36.
25. Ritschel, P.S., T.C.L. Lins, R.L. Tristan, G.S.C. Buso, J.A. Buso and M.E. Ferreira (2004) Development of microsatellite markers from an enriched genomic library for genetic analysis of melon (Cucumis melo L.). BMC Plant Biol. 4: 9.
26. Robinson, R.W. and D.S. Decker-Walters (1997) Cucurbits. Crop production science in horticulture. Cab International, New York, p. 66.
27. Saito, A., K. Tanaka and C. Deuanhaksa (2009) Collaborative exploration of vegetable genetic resources in Laos, 2008. Annual Report on Exploration and Introduction of Plant Genetic Resources. Natl. Inst. Agrobiol. Sci. 25: 111-145.
28. Sensoy, S., S. Buyukalaca and K. Abak (2007) Evaluation of genetic diversity in Turkish melons (Cucumis melo L.) based on phenotypic characters and RAPD markers. Genet. Resour. Crop Evol. 54: 1351-1365.
29. Soltani, F., Y. Akashi, A. Kashi, Z. Zamani, Y. Mostofi and K. Kato (2010) Characterization of Iranian melon landraces of Cucumis melo L. groups Flexousus and Dudaim by analysis of morphological characters and random amplified polymorphic DNA. Breed. Sci. 60: 34-45.
30. Staub, J.E., A.I. López-Sesé and N. Fanourakis (2004) Diversity among melon landraces (Cucumis melo L.) from Greece and their genetic relationship with other melon germplasm of diverse origins. Euphytica 136: 151-166.
31. Tanaka, K., K. Fukunaga, Y. Akashi, H. Nishida, K. Kato and M.T. Khaing (2006) Polyphyletic origin of cultivated melon inferred from analysis of its chloroplast genome. Cucurbitaceae 2006: 372-379.
32. Tanaka, K., A. Nishitani, Y. Akashi, H. Nishida, H. Yoshino and K. Kato (2007) Molecular characterization of South and East Asian melon, Cucumis melo L., and the origin of group Conomon var. makuwa and var. conomon revealed by RAPD analysis. Euphytica 153:233-247.
33. Weir, B.S. (1996) Genetic data analysis II. Sinauer Associate Inc. Publisher, Massachusetts.
34. Yashiro, K., H. Iwata, Y. Akashi, K. Tomita, M. Kuzuya, Y. Tsumura and K. Kato (2005) Genetic relationship among East and South Asian melon (Cucumis melo L.) revealed by AFLP analysis. Breed. Sci. 55: 197-206.
35. Yi, S.S., Y. Akashi, K. Tanaka, T.T. Cho, M.T. Khaing, H. Yoshino, H. Nishida, T. Yamamoto, K. Win and K. Kato (2009) Molecular analysis of genetic diversity in melon landraces (Cucumis melo L.) from Myanmar and their relationship with melon germplasm from East and South Asia. Genet. Resour. Crop Evol. 56: 1149-1161.