-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1990). Basic local alignment search tool. J Mol Biol 215, 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
77950607868
-
Indibacter alkaliphilus gen. nov., sp. nov., an alkaliphilic bacterium isolated from a haloalkaline lake
-
Anil Kumar, P., Srinivas, T. N. R., Madhu, S., Ruth Manorama, R. & Shivaji, S. (2010). Indibacter alkaliphilus gen. nov., sp. nov., an alkaliphilic bacterium isolated from a haloalkaline lake. Int J Syst Evol Microbiol 60, 721-726.
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 721-726
-
-
Anil Kumar, P.1
Srinivas, T.N.R.2
Madhu, S.3
Ruth Manorama, R.4
Shivaji, S.5
-
3
-
-
70350735914
-
Belliella pelovolcani sp. nov., isolated from a mud-volcano in Taiwan
-
Arun, A. B., Young, C. C., Chen, W. M., Hung, M. H., Lai, W. A., Chou, J. H., Rekha, P. D., Shen, F. T. & Su, S. P. (2009). Belliella pelovolcani sp. nov., isolated from a mud-volcano in Taiwan. Int J Syst Evol Microbiol 59, 2534-2537.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 2534-2537
-
-
Arun, A.B.1
Young, C.C.2
Chen, W.M.3
Hung, M.H.4
Lai, W.A.5
Chou, J.H.6
Rekha, P.D.7
Shen, F.T.8
Su, S.P.9
-
4
-
-
0141725843
-
Algoriphagus ratkowskyi gen. nov., sp. nov., Brumimicrobium glaciale gen. nov., sp. nov., Cryomorpha ignava gen. nov., sp. nov. and Crocinitomix catalasitica gen. nov., sp. nov., novel flavobacteria isolated from various polar habitats
-
Bowman, J. P., Nichols, C. M. & Gibson, J. A. (2003). Algoriphagus ratkowskyi gen. nov., sp. nov., Brumimicrobium glaciale gen. nov., sp. nov., Cryomorpha ignava gen. nov., sp. nov. and Crocinitomix catalasitica gen. nov., sp. nov., novel flavobacteria isolated from various polar habitats. Int J Syst Evol Microbiol 53, 1343-1355.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 1343-1355
-
-
Bowman, J.P.1
Nichols, C.M.2
Gibson, J.A.3
-
5
-
-
0842302333
-
Belliella baltica gen. nov., sp. nov., a novel marine bacterium of the Cytophaga-Flavobacterium-Bacteroides group isolated from surface water of the central Baltic Sea
-
DOI 10.1099/ijs.0.02752-0
-
Brettar, I., Christen, R. & Höfle, M. G. (2004a). Belliella baltica gen. nov., sp. nov., a novel marine bacterium of the Cytophaga-Flavobacterium-Bacteroides group isolated from surface water of the central Baltic Sea. Int J Syst Evol Microbiol 54, 65-70. (Pubitemid 38181272)
-
(2004)
International Journal of Systematic and Evolutionary Microbiology
, vol.54
, Issue.1
, pp. 65-70
-
-
Brettar, I.1
Christen, R.2
Hofle, M.G.3
-
6
-
-
9744222794
-
Aquiflexum balticum gen. nov., sp. nov., a novel marine bacterium of the Cytophaga-Flavobacterium-Bacteroides group isolated from surface water of the central Baltic Sea
-
DOI 10.1099/ijs.0.63255-0
-
Brettar, I., Christen, R. & Höfle, M. G. (2004b). Aquiflexum balticum gen. nov., sp. nov., a novel marine bacterium of the Cytophaga-Flavobacterium-Bacteroides group isolated from surface water of the central Baltic Sea. Int J Syst Evol Microbiol 54, 2335-2341. (Pubitemid 39585427)
-
(2004)
International Journal of Systematic and Evolutionary Microbiology
, vol.54
, Issue.6
, pp. 2335-2341
-
-
Brettar, I.1
Christen, R.2
Hofle, M.G.3
-
7
-
-
35648991375
-
EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
-
Chun, J., Lee, J.-H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 2259-2261
-
-
Chun, J.1
Lee, J.-H.2
Jung, Y.3
Kim, M.4
Kim, S.5
Kim, B.K.6
Lim, Y.W.7
-
8
-
-
0017682064
-
Distribution of menaquinones in actinomycetes and corynebacteria
-
Collins, M. D., Pirouz, T., Goodfellow, M. & Minnikin, D. E. (1977). Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100, 221-230.
-
(1977)
J Gen Microbiol
, vol.100
, pp. 221-230
-
-
Collins, M.D.1
Pirouz, T.2
Goodfellow, M.3
Minnikin, D.E.4
-
9
-
-
39749086165
-
Algoriphagus hitonicola sp. nov., isolated from an athalassohaline lagoon
-
Copa-Patiño, J. L., Arenas, M., Soliveri, J., Sánchez-Porro, C. & Ventosa, A. (2008). Algoriphagus hitonicola sp. nov., isolated from an athalassohaline lagoon. Int J Syst Evol Microbiol 58, 424-428.
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 424-428
-
-
Copa-Patiño, J.L.1
Arenas, M.2
Soliveri, J.3
Sánchez-Porro, C.4
Ventosa, A.5
-
10
-
-
0003437299
-
-
Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA
-
Felsenstein, J. (1993). PHYLIP (phylogeny inference package) version 3.5.1. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
-
(1993)
PHYLIP (Phylogeny Inference Package) Version 3.5.1
-
-
Felsenstein, J.1
-
11
-
-
0030870230
-
Demetria terragena gen. nov., sp. nov., a new genus of actinomycetes isolated from compost soil
-
Groth, I., Schumann, P., Rainey, F. A., Martin, K., Schuetze, B. & Augsten, K. (1997). Demetria terragena gen. nov., sp. nov., a new genus of actinomycetes isolated from compost soil. Int J Syst Bacteriol 47, 1129-1133.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 1129-1133
-
-
Groth, I.1
Schumann, P.2
Rainey, F.A.3
Martin, K.4
Schuetze, B.5
Augsten, K.6
-
12
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon, S. & Gascuel, O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52, 696-704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
13
-
-
38649089758
-
Cultivable bacterial diversity of alkaline Lonar lake, India
-
Joshi, A. A., Kanekar, P. P., Kelkar, A. S., Shouche, Y. S., Vani, A. A., Borgave, S. B. & Sarnaik, S. S. (2008). Cultivable bacterial diversity of alkaline Lonar lake, India. Microb Ecol 55, 163-172.
-
(2008)
Microb Ecol
, vol.55
, pp. 163-172
-
-
Joshi, A.A.1
Kanekar, P.P.2
Kelkar, A.S.3
Shouche, Y.S.4
Vani, A.A.5
Borgave, S.B.6
Sarnaik, S.S.7
-
14
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
15
-
-
77956800518
-
Lipid and cell-wall analysis in bacterial systematics
-
Komagata, K. & Suzuki, K. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
-
(1987)
Methods Microbiol
, vol.19
, pp. 161-207
-
-
Komagata, K.1
Suzuki, K.2
-
16
-
-
0001857117
-
16S/23S rRNA sequencing
-
Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
-
Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
17
-
-
77956816836
-
Classical and rapid identification methods for medically important bacteria
-
Lányí, B. (1987). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19, 1-67.
-
(1987)
Methods Microbiol
, vol.19
, pp. 1-67
-
-
Lányí, B.1
-
18
-
-
69449096415
-
Algoriphagus aquatilis sp. nov., isolated from a freshwater lake
-
Liu, Y., Li, H., Jiang, J. T., Liu, Y. H., Song, X. F., Xu, C. J. & Liu, Z. P. (2009). Algoriphagus aquatilis sp. nov., isolated from a freshwater lake. Int J Syst Evol Microbiol 59, 1759-1763.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 1759-1763
-
-
Liu, Y.1
Li, H.2
Jiang, J.T.3
Liu, Y.H.4
Song, X.F.5
Xu, C.J.6
Liu, Z.P.7
-
19
-
-
85010439719
-
A procedure for the isolation of deoxyribonucleic acid from microorganisms
-
Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
-
(1961)
J Mol Biol
, vol.3
, pp. 208-218
-
-
Marmur, J.1
-
20
-
-
5544272846
-
Description of Algoriphagus aquimarinus sp. nov., Algoriphagus chordae sp. nov. and Algoriphagus winogradskyi sp. nov., from sea water and algae, transfer of Hongiella halophila Yi and Chun 2004 to the genus Algoriphagus as Algoriphagus halophilus comb. nov. and emended descriptions of the genera Algoriphagus Bowman et al. 2003 and Hongiella Yi and Chun 2004
-
Nedashkovskaya, O. I., Vancanneyt, M., Van Trappen, S., Vandemeulebroecke, K., Lysenko, A. M., Rohde, M., Falsen, E., Frolova, G. M., Mikhailov, V. V. & Swings, J. (2004). Description of Algoriphagus aquimarinus sp. nov., Algoriphagus chordae sp. nov. and Algoriphagus winogradskyi sp. nov., from sea water and algae, transfer of Hongiella halophila Yi and Chun 2004 to the genus Algoriphagus as Algoriphagus halophilus comb. nov. and emended descriptions of the genera Algoriphagus Bowman et al. 2003 and Hongiella Yi and Chun 2004. Int J Syst Evol Microbiol 54, 1757-1764.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 1757-1764
-
-
Nedashkovskaya, O.I.1
Vancanneyt, M.2
Van Trappen, S.3
Vandemeulebroecke, K.4
Lysenko, A.M.5
Rohde, M.6
Falsen, E.7
Frolova, G.M.8
Mikhailov, V.V.9
Swings, J.10
-
21
-
-
27844523171
-
Cyclobacterium amurskyense sp. nov., a novel marine bacterium isolated from sea water
-
Nedashkovskaya, O. I., Kim, S. B., Lee, M. S., Park, M. S., Lee, K. H., Lysenko, A. M., Oh, H. W., Mikhailov, V. V. & Bae, K. S. (2005). Cyclobacterium amurskyense sp. nov., a novel marine bacterium isolated from sea water. Int J Syst Evol Microbiol 55, 2391-2394.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 2391-2394
-
-
Nedashkovskaya, O.I.1
Kim, S.B.2
Lee, M.S.3
Park, M.S.4
Lee, K.H.5
Lysenko, A.M.6
Oh, H.W.7
Mikhailov, V.V.8
Bae, K.S.9
-
22
-
-
33744750500
-
Echinicola pacifica gen. nov., sp. nov., a novel flexibacterium isolated from the sea urchin Strongylocentrotus intermedius
-
Nedashkovskaya, O. I., Kim, S. B., Vancanneyt, M., Lysenko, A. M., Shin, D. S., Park, M. S., Lee, K. H., Jung, W. J., Kalinovskaya, N. I. & other authors (2006). Echinicola pacifica gen. nov., sp. nov., a novel flexibacterium isolated from the sea urchin Strongylocentrotus intermedius. Int J Syst Evol Microbiol 56, 953-958.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 953-958
-
-
Nedashkovskaya, O.I.1
Kim, S.B.2
Vancanneyt, M.3
Lysenko, A.M.4
Shin, D.S.5
Park, M.S.6
Lee, K.H.7
Jung, W.J.8
Kalinovskaya, N.I.9
-
23
-
-
34848844458
-
Proposal of Algoriphagus vanfongensis sp. nov., transfer of members of the genera Hongiella Yi and Chun 2004 emend. Nedashkovskaya et al. 2004 and Chimaereicella Tiago et al. 2006 to the genus Algoriphagus, and emended description of the genus Algoriphagus Bowman et al. 2003 emend. Nedashkovskaya et al. 2004
-
Nedashkovskaya, O. I., Kim, S. B., Kwon, K. K., Shin, D. S., Luo, X., Kim, S. J. & Mikhailov, V. V. (2007). Proposal of Algoriphagus vanfongensis sp. nov., transfer of members of the genera Hongiella Yi and Chun 2004 emend. Nedashkovskaya et al. 2004 and Chimaereicella Tiago et al. 2006 to the genus Algoriphagus, and emended description of the genus Algoriphagus Bowman et al. 2003 emend. Nedashkovskaya et al. 2004. Int J Syst Evol Microbiol 57, 1988-1994.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 1988-1994
-
-
Nedashkovskaya, O.I.1
Kim, S.B.2
Kwon, K.K.3
Shin, D.S.4
Luo, X.5
Kim, S.J.6
Mikhailov, V.V.7
-
24
-
-
0025039003
-
Proposal of Cyclobacterium marinus gen. nov., comb. nov., for a marine bacterium previously assigned to the genus Flectobacillus
-
Raj, H. D. & Maloy, S. R. (1990). Proposal of Cyclobacterium marinus gen. nov., comb. nov., for a marine bacterium previously assigned to the genus Flectobacillus. Int J Syst Bacteriol 40, 337-347.
-
(1990)
Int J Syst Bacteriol
, vol.40
, pp. 337-347
-
-
Raj, H.D.1
Maloy, S.R.2
-
25
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
26
-
-
0022549465
-
The use of second derivative plots for the determination of mol% guanine plus cytosine of DNA by the thermal denaturation method
-
Sly, L. I., Blackall, L. L., Kraat, P. C., Tao, T.-S. & Sangkhobol, V. (1986). The use of second derivative plots for the determination of mol% guanine plus cytosine of DNA by the thermal denaturation method. J Microbiol Methods 5, 139-156.
-
(1986)
J Microbiol Methods
, vol.5
, pp. 139-156
-
-
Sly, L.I.1
Blackall, L.L.2
Kraat, P.C.3
Tao, T.-S.4
Sangkhobol, V.5
-
27
-
-
0000612080
-
Phenotypic characterization
-
Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
-
Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
-
(1994)
Methods for General and Molecular Bacteriology
, pp. 607-654
-
-
Smibert, R.M.1
Krieg, N.R.2
-
28
-
-
0031574072
-
The CLUSTAL-X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., Higgins, D. G., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
Plewniak, F.4
Jeanmougin, F.5
Higgins, D.G.6
-
29
-
-
9744273388
-
Algoriphagus antarcticus sp. nov., a novel psychrophile from microbial mats in Antarctic lakes
-
Van Trappen, S., Vandecandelaere, I., Mergaert, J. & Swings, J. (2004). Algoriphagus antarcticus sp. nov., a novel psychrophile from microbial mats in Antarctic lakes. Int J Syst Evol Microbiol 54, 1969-1973.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 1969-1973
-
-
Van Trappen, S.1
Vandecandelaere, I.2
Mergaert, J.3
Swings, J.4
-
30
-
-
33845806448
-
Cyclobacterium lianum sp. nov., a marine bacterium isolated from sediment of an oilfield in the South China Sea, and emended description of the genus Cyclobacterium
-
Ying, J. Y., Wang, B. J., Yang, S. S. & Liu, S. J. (2006). Cyclobacterium lianum sp. nov., a marine bacterium isolated from sediment of an oilfield in the South China Sea, and emended description of the genus Cyclobacterium. Int J Syst Evol Microbiol 56, 2927-2930.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 2927-2930
-
-
Ying, J.Y.1
Wang, B.J.2
Yang, S.S.3
Liu, S.J.4
-
31
-
-
22644442930
-
Algoriphagus locisalis sp. nov., isolated from a marine solar saltern
-
Yoon, J. H., Kang, S. J. & Oh, T. K. (2005). Algoriphagus locisalis sp. nov., isolated from a marine solar saltern. Int J Syst Evol Microbiol 55, 1635-1639.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 1635-1639
-
-
Yoon, J.H.1
Kang, S.J.2
Oh, T.K.3
-
32
-
-
33646254867
-
Algoriphagus terrigena sp. nov., isolated from soil
-
Yoon, J. H., Lee, M. H., Kang, S. J. & Oh, T. K. (2006). Algoriphagus terrigena sp. nov., isolated from soil. Int J Syst Evol Microbiol 56, 777-780.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 777-780
-
-
Yoon, J.H.1
Lee, M.H.2
Kang, S.J.3
Oh, T.K.4
-
33
-
-
0002685935
-
Studies on marine bacteria. I. The cultural requirements of heterotrophic aerobes
-
ZoBell, C. E. (1941). Studies on marine bacteria. I. The cultural requirements of heterotrophic aerobes. J Mar Res 4, 42-75.
-
(1941)
J Mar Res
, vol.4
, pp. 42-75
-
-
ZoBell, C.E.1
|