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Volumn 5, Issue 10, 2010, Pages

A gene in the process of endosymbiotic transfer

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEAR PROTEIN; NUCLEOTIDE; PBS 28 PROTEIN; UNCLASSIFIED DRUG; YELLOW FLUORESCENT PROTEIN; PROTEIN;

EID: 78049267260     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0013234     Document Type: Article
Times cited : (13)

References (38)
  • 1
    • 0032727696 scopus 로고    scopus 로고
    • Tracing the thread of plastid diversity through the tapestry of life
    • Delwiche CF (1999) Tracing the thread of plastid diversity through the tapestry of life. Am Nat 154: S164-S177.
    • (1999) Am Nat , vol.154
    • Delwiche, C.F.1
  • 2
    • 0037126071 scopus 로고    scopus 로고
    • Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
    • Martin W, Rujan T, Richly E, Hansen S, Hasegawa M, et al. (2002) Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proc Natl Acad Sci USA 99: 12246-12251.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 12246-12251
    • Martin, W.1    Rujan, T.2    Richly, E.3    Hansen, S.4    Hasegawa, M.5
  • 3
    • 47249152709 scopus 로고    scopus 로고
    • Targeting of nucleus-encoded proteins to chloroplasts in plants
    • Jarvis P (2008) Targeting of nucleus-encoded proteins to chloroplasts in plants. New Phytol 179: 257-285.
    • (2008) New Phytol , vol.179 , pp. 257-285
    • Jarvis, P.1
  • 4
    • 57649129659 scopus 로고    scopus 로고
    • Evolution of the apicoplast and its host: From heterotrophy to autotrophy and back again
    • Oborni ́k M, Janous ̌kovec J, Chrudimsky ́ T, Lukes ̌ J (2009) Evolution of the apicoplast and its host: From heterotrophy to autotrophy and back again. Int J Parasitol 39: 1-12.
    • (2009) Int J Parasitol , vol.39 , pp. 1-12
    • Oborník, M.1    Janouškovec, J.2    Chrudimský, T.3    Lukeš, J.4
  • 5
    • 6044252163 scopus 로고    scopus 로고
    • The genome of the diatom Thalassiosira pseudonana: Ecology, evolution, and metabolism
    • Armbrust EV, Berges JA, Bowler C, Green BR, Martinez D, et al. (2004) The genome of the diatom Thalassiosira pseudonana: Ecology, evolution, and metabolism. Science 306: 79-86.
    • (2004) Science , vol.306 , pp. 79-86
    • Armbrust, E.V.1    Berges, J.A.2    Bowler, C.3    Green, B.R.4    Martinez, D.5
  • 6
    • 0036443528 scopus 로고    scopus 로고
    • Protein transport into secondary plastids and the evolution of primary and secondary plastids
    • Kroth PG (2002) Protein transport into secondary plastids and the evolution of primary and secondary plastids. Int Rev Cytol Surv Cell Biol 221: 191-255.
    • (2002) Int Rev Cytol Surv Cell Biol , vol.221 , pp. 191-255
    • Kroth, P.G.1
  • 7
    • 1042290470 scopus 로고    scopus 로고
    • The low molecular mass subunits of the photosynthetic supracomplex, photosystem II
    • Shi LX, Schröder WP (2004) The low molecular mass subunits of the photosynthetic supracomplex, photosystem II. Biochim Biophys Acta 1608: 75-96.
    • (2004) Biochim Biophys Acta , vol.1608 , pp. 75-96
    • Shi, L.X.1    Schröder, W.P.2
  • 8
    • 0037172810 scopus 로고    scopus 로고
    • Proteomic analysis of a highly active photosystem II preparation from the cyanobacterium Synechocystis sp. PCC 6803 reveals the presence of novel polypeptides
    • Kashino Y, Lauber WM, Carroll JA, Wang Q, Whitmarsh J, et al. (2002) Proteomic analysis of a highly active photosystem II preparation from the cyanobacterium Synechocystis sp. PCC 6803 reveals the presence of novel polypeptides. Biochemistry 41: 8004-8012.
    • (2002) Biochemistry , vol.41 , pp. 8004-8012
    • Kashino, Y.1    Lauber, W.M.2    Carroll, J.A.3    Wang, Q.4    Whitmarsh, J.5
  • 10
    • 51649139576 scopus 로고
    • Complete nucleotide sequence of the Porphyra purpurea chloroplast genome
    • Reith ME, Munholland J (1995) Complete nucleotide sequence of the Porphyra purpurea chloroplast genome. Plant Mol Biol Rep 13: 333-335.
    • (1995) Plant Mol Biol Rep , vol.13 , pp. 333-335
    • Reith, M.E.1    Munholland, J.2
  • 11
    • 0032900424 scopus 로고    scopus 로고
    • The plastid genome of the cryptophyte alga Guillardia theta: Complete sequence and conserved synteny groups confirm its common ancestry with red algae
    • Douglas SE, Penny SL (1999) The plastid genome of the cryptophyte alga Guillardia theta: complete sequence and conserved synteny groups confirm its common ancestry with red algae. J Mol Evol 48: 236- 244.
    • (1999) J Mol Evol , vol.48 , pp. 236-244
    • Douglas, S.E.1    Penny, S.L.2
  • 12
    • 33947414878 scopus 로고    scopus 로고
    • Chloroplast genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana: Comparison with other plastid genomes of the red lineage
    • Oudot-Le Secq MP, Grimwood J, Shapiro H, Armbrust EV, Bowler C, et al. (2007) Chloroplast genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana: comparison with other plastid genomes of the red lineage. Mol Genet Genom 277: 427-439.
    • (2007) Mol Genet Genom , vol.277 , pp. 427-439
    • Secq, O.-L.M.P.1    Grimwood, J.2    Shapiro, H.3    Armbrust, E.V.4    Bowler, C.5
  • 13
    • 44849092579 scopus 로고    scopus 로고
    • Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES 293 (West Pacific) strains (er)
    • Cattolico RA, Jacobs MA, Zhou Y, Chang J, Duplessis M, et al. (2008) Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES 293 (West Pacific) strains (er). BMC Genomics 9: 211-221.
    • (2008) BMC Genomics , vol.9 , pp. 211-221
    • Cattolico, R.A.1    Jacobs, M.A.2    Zhou, Y.3    Chang, J.4    Duplessis, M.5
  • 14
    • 56249098614 scopus 로고    scopus 로고
    • The Phaeodactylum genome reveals the evolutionary history of diatom genomes
    • Bowler C, Allen AE, Badger JH, Grimwood J, Jabbari K, et al. (2008) The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature 456: 239-244.
    • (2008) Nature , vol.456 , pp. 239-244
    • Bowler, C.1    Allen, A.E.2    Badger, J.H.3    Grimwood, J.4    Jabbari, K.5
  • 15
    • 11044228794 scopus 로고    scopus 로고
    • Diatom genomics: Genetic acquisition and merges
    • Nisbet RER, Kilian O, McFadden GI (2004) Diatom genomics: Genetic acquisition and merges. Curr Biol 14: R1048-R1050.
    • (2004) Curr Biol , vol.14
    • Nisbet, R.E.R.1    Kilian, O.2    McFadden, G.I.3
  • 16
    • 33748934377 scopus 로고    scopus 로고
    • Molecular genetic manipulation of the diatom Thalassiosira pseudonana (Bacillariophyceae)
    • Poulsen N, Chesley PM, Kroger N (2006) Molecular genetic manipulation of the diatom Thalassiosira pseudonana (Bacillariophyceae). J Phycol 42: 1059-1065.
    • (2006) J Phycol , vol.42 , pp. 1059-1065
    • Poulsen, N.1    Chesley, P.M.2    Kroger, N.3
  • 17
    • 0029966913 scopus 로고    scopus 로고
    • Stable nuclear transformation of the diatom Phaeodactylum tricornutum
    • Apt KE, Kroth PG, Grossman AR (1996) Stable nuclear transformation of the diatom Phaeodactylum tricornutum. Mol Gen Genet 252: 572-579.
    • (1996) Mol Gen Genet , vol.252 , pp. 572-579
    • Apt, K.E.1    Kroth, P.G.2    Grossman, A.R.3
  • 19
    • 58149204053 scopus 로고    scopus 로고
    • Update of the Diatom EST Database: A new tool for digital transcriptomics
    • (Database issue)
    • Maheswari U, Mock T, Armbrust EV, Bowler C (2009) Update of the Diatom EST Database: a new tool for digital transcriptomics. Nucleic Acids Res 37 (Database issue): D1001-5.
    • (2009) Nucleic Acids Res , vol.37
    • Maheswari, U.1    Mock, T.2    Armbrust, E.V.3    Bowler, C.4
  • 20
    • 34248531753 scopus 로고    scopus 로고
    • Locating proteins in the cell using TargetP, SignalP and related tools
    • Emanuelsson O, Brunak S, von Heijne G, Nielsen H (2007) Locating proteins in the cell using TargetP, SignalP and related tools. Nat Protoc 2: 953-971.
    • (2007) Nat Protoc , vol.2 , pp. 953-971
    • Emanuelsson, O.1    Brunak, S.2    von Heijne, G.3    Nielsen, H.4
  • 21
    • 12844260363 scopus 로고    scopus 로고
    • Identification and characterization of a new conserved motif within the presequence of proteins targeted into complex diatom plastids
    • Kilian O, Kroth PG (2005) Identification and characterization of a new conserved motif within the presequence of proteins targeted into complex diatom plastids. Plant J 41: 175-83.
    • (2005) Plant J , vol.41 , pp. 175-183
    • Kilian, O.1    Kroth, P.G.2
  • 22
    • 34250179494 scopus 로고    scopus 로고
    • Protein targeting into complex diatom plastids: Functional characterisation of a specific targeting motif
    • Gruber A, Vugrinec S, Hempel F, Gould SB, Maier UG, et al. (2007) Protein targeting into complex diatom plastids: functional characterisation of a specific targeting motif. Plant Mol Biol 64: 519-530.
    • (2007) Plant Mol Biol , vol.64 , pp. 519-530
    • Gruber, A.1    Vugrinec, S.2    Hempel, F.3    Gould, S.B.4    Maier, U.G.5
  • 23
    • 15044345034 scopus 로고    scopus 로고
    • Protein targeting to the chloroplasts of photosynthetic eukaryotes: Getting there is half the fun
    • Nassoury N, Morse D (2005) Protein targeting to the chloroplasts of photosynthetic eukaryotes: getting there is half the fun. Biochim Biophys Acta 1743: 5-19.
    • (2005) Biochim Biophys Acta , vol.1743 , pp. 5-19
    • Nassoury, N.1    Morse, D.2
  • 24
    • 67649998350 scopus 로고    scopus 로고
    • Genomic Footprints of a Cryptic Plastid Endosymbiosis in Diatoms
    • Moustafa A, Beszteri B, Maier UG, Bowler C, Valentin K, et al. (2009) Genomic Footprints of a Cryptic Plastid Endosymbiosis in Diatoms. Science 324: 1724-1726.
    • (2009) Science , vol.324 , pp. 1724-1726
    • Moustafa, A.1    Beszteri, B.2    Maier, U.G.3    Bowler, C.4    Valentin, K.5
  • 25
    • 0037036943 scopus 로고    scopus 로고
    • Dealing with saturation at amino acid level: A case study based on anciently duplicated zebrafish genes
    • Van de Peer Y, Frickey T, Taylor JS, Meyer A (2002) Dealing with saturation at amino acid level: a case study based on anciently duplicated zebrafish genes. Gene 295: 205-211.
    • (2002) Gene , vol.295 , pp. 205-211
    • van de Peer, Y.1    Frickey, T.2    Taylor, J.S.3    Meyer, A.4
  • 26
    • 2442691520 scopus 로고    scopus 로고
    • A byesian mixture model for across-site heterogenities in the amino-acid replacement process
    • Lartillot N, Philippe H (2004) A byesian mixture model for across-site heterogenities in the amino-acid replacement process. Mol Biol Evol 21: 1095-1109.
    • (2004) Mol Biol Evol , vol.21 , pp. 1095-1109
    • Lartillot, N.1    Philippe, H.2
  • 27
    • 47249122561 scopus 로고    scopus 로고
    • A site- and time-heterogenous model of amino acid replacement
    • Blanquart S, Lartillot N (2008) A site- and time-heterogenous model of amino acid replacement. Mol Biol Evol 25: 842-858.
    • (2008) Mol Biol Evol , vol.25 , pp. 842-858
    • Blanquart, S.1    Lartillot, N.2
  • 28
    • 60249085223 scopus 로고    scopus 로고
    • Psb28 protein is involved in the biogenesis of the photosystem II inner antenna CP47 (PsbB) in the cyanobacterium Synechocystis sp. PCC 6803
    • Dobáková M, Sobotka R, Tichý M, Komenda J (2009) Psb28 protein is involved in the biogenesis of the photosystem II inner antenna CP47 (PsbB) in the cyanobacterium Synechocystis sp. PCC 6803. Plant Physiol 149: 1076-1086.
    • (2009) Plant Physiol , vol.149 , pp. 1076-1086
    • Dobáková, M.1    Sobotka, R.2    Tichý, M.3    Komenda, J.4
  • 29
    • 0035056576 scopus 로고    scopus 로고
    • Many parallel looses of infA from chloroplast DNA during angiosperm evolution with multiple independet transfers to nucleus
    • Millen RS, Olmstead RG, Adams KL, Palmer JD, Lao NT, et al. (2001) Many parallel looses of infA from chloroplast DNA during angiosperm evolution with multiple independet transfers to nucleus. Plant Cell 13: 645-658.
    • (2001) Plant Cell , vol.13 , pp. 645-658
    • Millen, R.S.1    Olmstead, R.G.2    Adams, K.L.3    Palmer, J.D.4    Lao, N.T.5
  • 30
    • 3042755050 scopus 로고    scopus 로고
    • Simple and complex nuclear loci created by newly transferred chloroplast DNA in tobacco
    • Huang CY, Ayliffe MA, Timmis JN (2004) Simple and complex nuclear loci created by newly transferred chloroplast DNA in tobacco. Proc Natl Acad Sci USA 101: 9710-9715.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 9710-9715
    • Huang, C.Y.1    Ayliffe, M.A.2    Timmis, J.N.3
  • 31
    • 55549094836 scopus 로고    scopus 로고
    • Transfer of plastid DNA to the nucleus is elevated during male gametogenesis in tobacco
    • Sheppard AE, Ayliffe MA, Blatch L, Day A, Delaney SK, et al. (2008) Transfer of plastid DNA to the nucleus is elevated during male gametogenesis in tobacco. Plant Physiol 148: 328-336.
    • (2008) Plant Physiol , vol.148 , pp. 328-336
    • Sheppard, A.E.1    Ayliffe, M.A.2    Blatch, L.3    Day, A.4    Delaney, S.K.5
  • 33
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41: 95-98.
    • (1999) Nucl Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 34
    • 0037100671 scopus 로고    scopus 로고
    • Mafft: A novel method for rapid multiple sequence alignment based on fast Fourier transform
    • Katoh K, Misawa K, Kuma K, Miyata T (2002) Mafft: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucl Acids Res 30: 3059-3066.
    • (2002) Nucl Acids Res , vol.30 , pp. 3059-3066
    • Katoh, K.1    Misawa, K.2    Kuma, K.3    Miyata, T.4
  • 36
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O (2003) A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 37
    • 45849154166 scopus 로고    scopus 로고
    • An improved general amino-acid replacement matrix
    • Le SQ, Gascuel O (2008) An Improved General Amino-Acid Replacement Matrix. Mol Biol Evol 25: 1307-1320.
    • (2008) Mol Biol Evol , vol.25 , pp. 1307-1320
    • Le, S.Q.1    Gascuel, O.2
  • 38
    • 34848926649 scopus 로고    scopus 로고
    • Molecular toolbox for studying diatom biology in Phaeodactylum tricornutum
    • Siaut M, Heijde M, Mangogna M, Montsant A, Coesel S, et al. (2007) Molecular toolbox for studying diatom biology in Phaeodactylum tricornutum. Gene 406: 23-35.
    • (2007) Gene , vol.406 , pp. 23-35
    • Siaut, M.1    Heijde, M.2    Mangogna, M.3    Montsant, A.4    Coesel, S.5


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