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Volumn 56, Issue 10, 2010, Pages 838-845

Quantitative PCR assay of sewage-associated bacteroides markers to assess sewage pollution in an urban lake in Dhaka, Bangladesh

Author keywords

Fecal indicator bacteria; Host specific molecular markers; Microbial source tracking; Public health risk; Sewage pollution

Indexed keywords

BACTEROIDES; BANGLADESH; FECAL INDICATOR BACTERIA; LAKE WATER SAMPLES; LAKE WATERS; MICROBIAL SOURCE TRACKING; MOLECULAR ASSAYS; MOLECULAR MARKER; POTENTIAL HEALTH; PUBLIC HEALTH RISKS; QUANTITATIVE DETECTION; QUANTITATIVE PCR; ROBUST STRATEGY; URBAN LAKE; WATER SAMPLES;

EID: 77958591639     PISSN: 00084166     EISSN: 14803275     Source Type: Journal    
DOI: 10.1139/W10-070     Document Type: Article
Times cited : (47)

References (26)
  • 1
    • 23744453852 scopus 로고    scopus 로고
    • Host species-specific metabolic fingerprint database for enterococci and Escherichia coli and its application to identify sources of fecal contamination in surface waters
    • doi:10.1128/AEM.71.8.4461-4468.2005. PMID:16085837
    • Ahmed, W., Neller, R., and Katouli, M. 2005. Host species-specific metabolic fingerprint database for enterococci and Escherichia coli and its application to identify sources of fecal contamination in surface waters. Appl. Environ. Microbiol. 71(8): 4461-4468. doi:10.1128/AEM.71.8.4461-4468.2005. PMID:16085837.
    • (2005) Appl. Environ. Microbiol , vol.71 , Issue.8 , pp. 4461-4468
    • Ahmed, W.1    Neller, R.2    Katouli, M.3
  • 2
    • 38349138542 scopus 로고    scopus 로고
    • Evaluation of Bacteroides markers for the detection of human faecal pollution
    • doi:10.1111/j. 1472-765X.2007.02287.x. PMID:18028325
    • Ahmed, W., Stewart, J., Powell, D., and Gardner, T. 2008. Evaluation of Bacteroides markers for the detection of human faecal pollution. Lett. Appl. Microbiol. 46(2): 237-242. doi:10.1111/j. 1472-765X.2007.02287.x. PMID:18028325.
    • (2008) Lett. Appl. Microbiol , vol.46 , Issue.2 , pp. 237-242
    • Ahmed, W.1    Stewart, J.2    Powell, D.3    Gardner, T.4
  • 3
    • 0033774937 scopus 로고    scopus 로고
    • A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA
    • doi:10.1128/AEM.66.10.4571-4574.2000. PMID:11010920
    • Bernhard, A.E., and Field, K.G. 2000. A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA. Appl. Environ. Microbiol. 66(10): 4571-4574. doi:10.1128/AEM.66.10.4571-4574.2000. PMID:11010920.
    • (2000) Appl. Environ. Microbiol , vol.66 , Issue.10 , pp. 4571-4574
    • Bernhard, A.E.1    Field, K.G.2
  • 4
    • 0037296250 scopus 로고    scopus 로고
    • Application of a rapid method for identifying fecal pollution sources in a multi-use estuary
    • doi:10.1016/S0043-1354(02)00384-6. PMID:12531273
    • Bernhard, A.E., Goyard, T., Simonich, M.T., and Field, K.G. 2003. Application of a rapid method for identifying fecal pollution sources in a multi-use estuary. Water Res. 37(4): 909-913. doi:10.1016/S0043-1354(02)00384-6. PMID:12531273.
    • (2003) Water Res , vol.37 , Issue.4 , pp. 909-913
    • Bernhard, A.E.1    Goyard, T.2    Simonich, M.T.3    Field, K.G.4
  • 5
    • 33749137265 scopus 로고    scopus 로고
    • Bacteroides spp. as reliable marker of sewage contamination in Hawaii's environmental waters using molecular techniques
    • doi:10.2166/wst.2006.455. PMID:17037140
    • Betancourt, W.Q., and Fujioka, R.S. 2006. Bacteroides spp. as reliable marker of sewage contamination in Hawaii's environmental waters using molecular techniques. Water Sci. Technol. 54(3): 101-107. doi:10.2166/wst.2006.455. PMID:17037140.
    • (2006) Water Sci. Technol , vol.54 , Issue.3 , pp. 101-107
    • Betancourt, W.Q.1    Fujioka, R.S.2
  • 6
    • 0037337331 scopus 로고    scopus 로고
    • Bioaugmentation as a tool to protect the structure and function of an activated-sludge microbial community against a 3-chloroaniline shock load
    • doi:10.1128/AEM.69.3.1511-1520.2003. PMID:12620837
    • Boon, N., Top, E.M., Verstraete, W., and Siciliano, S.D. 2003. Bioaugmentation as a tool to protect the structure and function of an activated-sludge microbial community against a 3-chloroaniline shock load. Appl. Environ. Microbiol. 69(3): 1511-1520. doi:10.1128/AEM.69.3.1511-1520.2003. PMID:12620837.
    • (2003) Appl. Environ. Microbiol , vol.69 , Issue.3 , pp. 1511-1520
    • Boon, N.1    Top, E.M.2    Verstraete, W.3    Siciliano, S.D.4
  • 7
    • 34547531503 scopus 로고    scopus 로고
    • Fecal source tracking, the indicator paradigm, and managing water quality
    • doi:10.1016/j.watres.2007.06.056. PMID:17643471
    • Field, K.G., and Samadpour, M. 2007. Fecal source tracking, the indicator paradigm, and managing water quality. Water Res. 41(16): 3517-3538. doi:10.1016/j.watres.2007.06.056. PMID:17643471.
    • (2007) Water Res , vol.41 , Issue.16 , pp. 3517-3538
    • Field, K.G.1    Samadpour, M.2
  • 8
    • 17444394882 scopus 로고    scopus 로고
    • Molecular assays for targeting human and bovine enteric viruses in coastal waters and their application for library-independent source tracking
    • doi:10.1128/AEM. 71.4.2070-2078.2005. PMID:15812040
    • Fong, T.T., Griffin, D.W., and Lipp, E.K. 2005. Molecular assays for targeting human and bovine enteric viruses in coastal waters and their application for library-independent source tracking. Appl. Environ. Microbiol. 71(4): 2070-2078. doi:10.1128/AEM. 71.4.2070-2078.2005. PMID:15812040.
    • (2005) Appl. Environ. Microbiol , vol.71 , Issue.4 , pp. 2070-2078
    • Fong, T.T.1    Griffin, D.W.2    Lipp, E.K.3
  • 9
    • 34547599998 scopus 로고    scopus 로고
    • Validation of host-specific Bacteriodales 16S rRNA genes as markers to determine the origin of faecal pollution in Atlantic Rim countries of the European Union
    • doi:10.1016/j.watres.2007. 01.028. PMID:17346765
    • Gawler, A.H., Beecher, J.E., Brandão, J., Carroll, N.M., Falcão, L., Gourmelon, M., et al. 2007. Validation of host-specific Bacteriodales 16S rRNA genes as markers to determine the origin of faecal pollution in Atlantic Rim countries of the European Union. Water Res. 41(16): 3780-3784. doi:10.1016/j.watres.2007. 01.028. PMID:17346765.
    • (2007) Water Res , vol.41 , Issue.16 , pp. 3780-3784
    • Gawler, A.H.1    Beecher, J.E.2    Brandão, J.3    Carroll, N.M.4    Falcão, L.5    Gourmelon, M.6
  • 10
    • 34547754433 scopus 로고    scopus 로고
    • Evaluation of two libraryindependent microbial source tracking methods to identify sources of fecal contamination in French estuaries
    • doi:10.1128/AEM.03003-06. PMID:17557850
    • Gourmelon, M., Caprais, M.P., Ségura, R., Le Mennec, C., Lozach, S., Piriou, J.Y., and Rincé, A. 2007. Evaluation of two libraryindependent microbial source tracking methods to identify sources of fecal contamination in French estuaries. Appl. Environ. Microbiol. 73(15): 4857-4866. doi:10.1128/AEM.03003-06. PMID:17557850.
    • (2007) Appl. Environ. Microbiol , vol.73 , Issue.15 , pp. 4857-4866
    • Gourmelon, M.1    Caprais, M.P.2    Ségura, R.3    Le Mennec, C.4    Lozach, S.5    Piriou, J.Y.6    Rincé, A.7
  • 11
    • 53349109369 scopus 로고    scopus 로고
    • Factors determining vulnerability to diarrhoea during and after severe floods in Bangladesh
    • doi:10. 2166/wh.2008.062. PMID:19108552
    • Hashizume, M., Wagatsuma, Y., Faruque, A.S.G., Hayashi, T., Hunter, P.R., Armstrong, B., and Sack, D.A. 2008. Factors determining vulnerability to diarrhoea during and after severe floods in Bangladesh. J. Water Health, 6(3): 323-332. doi:10. 2166/wh.2008.062. PMID:19108552.
    • (2008) J. Water Health , vol.6 , Issue.3 , pp. 323-332
    • Hashizume, M.1    Wagatsuma, Y.2    Faruque, A.S.G.3    Hayashi, T.4    Hunter, P.R.5    Armstrong, B.6    Sack, D.A.7
  • 12
    • 0347761194 scopus 로고    scopus 로고
    • Campylobacter spp., Giardia spp., Cryptosporidium spp., noroviruses, and indicator organisms in surface water in southwesttern Finland, 2000-2001
    • doi:10.1128/AEM.70.1.87-95.2004. PMID:14711629
    • Horman, A., Rimhanen-Finne, R., Maunula, L., von Bonsdorff, C.-H., Torvela, N., Heikinheimo, A., and Hänninen, M.-L. 2004. Campylobacter spp., Giardia spp., Cryptosporidium spp., noroviruses, and indicator organisms in surface water in southwesttern Finland, 2000-2001. Appl. Environ. Microbiol. 70(1): 87-95. doi:10.1128/AEM.70.1.87-95.2004. PMID:14711629.
    • (2004) Appl. Environ. Microbiol , vol.70 , Issue.1 , pp. 87-95
    • Horman, A.1    Rimhanen-Finne, R.2    Maunula, L.3    von Bonsdorff, C.-H.4    Torvela, N.5    Heikinheimo, A.6    Hänninen, M.-L.7
  • 13
    • 0036328284 scopus 로고    scopus 로고
    • A biomarker for the identification of cattle fecal pollution in water using the LTIIa toxin gene from enterotoxigenic Escherichia coli
    • doi:10.1007/s00253-002-0959-y. PMID:12073139
    • Khatib, L.A., Tsai, Y.L., and Olson, B.H. 2002. A biomarker for the identification of cattle fecal pollution in water using the LTIIa toxin gene from enterotoxigenic Escherichia coli. Appl. Microbiol. Biotechnol. 59(1): 97-104. doi:10.1007/s00253-002-0959-y. PMID:12073139.
    • (2002) Appl. Microbiol. Biotechnol , vol.59 , Issue.1 , pp. 97-104
    • Khatib, L.A.1    Tsai, Y.L.2    Olson, B.H.3
  • 14
    • 34547597968 scopus 로고    scopus 로고
    • 16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dogspecific fecal Bacteroidales: A Bayesian approach
    • doi:10.1016/j.watres.2007.06.037. PMID:17644149
    • Kildare, B.J., Leutenegger, C.M., McSwain, B.S., Bambic, D.G., Rajal, V.B., and Wuertz, S. 2007. 16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dogspecific fecal Bacteroidales: a Bayesian approach. Water Res. 41(16): 3701-3715. doi:10.1016/j.watres.2007.06.037. PMID:17644149.
    • (2007) Water Res , vol.41 , Issue.16 , pp. 3701-3715
    • Kildare, B.J.1    Leutenegger, C.M.2    McSwain, B.S.3    Bambic, D.G.4    Rajal, V.B.5    Wuertz, S.6
  • 15
    • 33745153077 scopus 로고    scopus 로고
    • Development of Bacteroides 16S rRNA gene TaqMan-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water
    • doi:10.1128/AEM.01036-05. PMID:16751534
    • Layton, A., McKay, L., Williams, D., Garrett, V., Gentry, R., and Sayler, G. 2006. Development of Bacteroides 16S rRNA gene TaqMan-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water. Appl. Environ. Microbiol. 72(6): 4214-4224. doi:10.1128/AEM.01036-05. PMID:16751534.
    • (2006) Appl. Environ. Microbiol , vol.72 , Issue.6 , pp. 4214-4224
    • Layton, A.1    McKay, L.2    Williams, D.3    Garrett, V.4    Gentry, R.5    Sayler, G.6
  • 16
    • 4143079488 scopus 로고    scopus 로고
    • Genetic diversity of Escherichia coli isolated from urban rivers and beach water
    • doi:10.1128/AEM.70.8.4658-4665.2004.PMID:15294799
    • McLellan, S.L. 2004. Genetic diversity of Escherichia coli isolated from urban rivers and beach water. Appl. Environ. Microbiol. 70(8): 4658-4665. doi:10.1128/AEM.70.8.4658-4665.2004.PMID:15294799.
    • (2004) Appl. Environ. Microbiol , vol.70 , Issue.8 , pp. 4658-4665
    • McLellan, S.L.1
  • 17
    • 33847312252 scopus 로고    scopus 로고
    • Quantification of host-specific Bacteroides-Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater
    • doi:10.1007/s00253-006-0714-x. PMID:17139508
    • Okabe, S., Okayama, N., Savichtcheva, O., and Ito, T. 2007. Quantification of host-specific Bacteroides-Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater. Appl. Microbiol. Biotechnol. 74(4): 890-901. doi:10.1007/s00253-006-0714-x. PMID:17139508.
    • (2007) Appl. Microbiol. Biotechnol , vol.74 , Issue.4 , pp. 890-901
    • Okabe, S.1    Okayama, N.2    Savichtcheva, O.3    Ito, T.4
  • 18
    • 0030862624 scopus 로고    scopus 로고
    • Association of multiple-antibiotic-resistance profiles with point and nonpoint sources of Escherichia coli in Apalachicola Bay
    • PMID:9212410
    • Parveen, S., Murphree, R.L., Edmiston, L., Kaspar, C.W., Portier, K.M., and Tamplin, M.L. 1997. Association of multiple-antibiotic-resistance profiles with point and nonpoint sources of Escherichia coli in Apalachicola Bay. Appl. Environ. Microbiol. 63(7): 2607-2612. PMID:9212410.
    • (1997) Appl. Environ. Microbiol , vol.63 , Issue.7 , pp. 2607-2612
    • Parveen, S.1    Murphree, R.L.2    Edmiston, L.3    Kaspar, C.W.4    Portier, K.M.5    Tamplin, M.L.6
  • 20
    • 33947640155 scopus 로고    scopus 로고
    • A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area
    • doi:10.1111/j.1472-765X.2006.02094.x. PMID:17397471
    • Reischer, G.H., Kasper, D.C., Steinborn, R., Farnleitner, A.H., and Mach, R.L. 2007. A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area. Lett. Appl. Microbiol. 44(4): 351-356. doi:10.1111/j.1472-765X.2006.02094.x. PMID:17397471.
    • (2007) Lett. Appl. Microbiol , vol.44 , Issue.4 , pp. 351-356
    • Reischer, G.H.1    Kasper, D.C.2    Steinborn, R.3    Farnleitner, A.H.4    Mach, R.L.5
  • 21
    • 11244270375 scopus 로고    scopus 로고
    • Potential use of a host associated molecular marker in Enterococcus faecium as an index of human fecal pollution
    • doi:10.1021/es035267n. PMID:15667106
    • Scott, T.M., Jenkins, T.M., Lukasik, J., and Rose, J.B. 2005. Potential use of a host associated molecular marker in Enterococcus faecium as an index of human fecal pollution. Environ. Sci. Technol. 39(1): 283-287. doi:10.1021/es035267n. PMID:15667106.
    • (2005) Environ. Sci. Technol , vol.39 , Issue.1 , pp. 283-287
    • Scott, T.M.1    Jenkins, T.M.2    Lukasik, J.3    Rose, J.B.4
  • 22
    • 33745271405 scopus 로고    scopus 로고
    • Identification of human fecal pollution sources in a coastal area: A case study at Oostende (Belgium)
    • PMID:16813010
    • Seurinck, S., Verdievel, M., Verstraete, W., and Siciliano, S.D. 2006. Identification of human fecal pollution sources in a coastal area: a case study at Oostende (Belgium). J. Water Health, 4(2): 167-175. PMID:16813010.
    • (2006) J. Water Health , vol.4 , Issue.2 , pp. 167-175
    • Seurinck, S.1    Verdievel, M.2    Verstraete, W.3    Siciliano, S.D.4
  • 23
    • 0003688691 scopus 로고
    • US Environmental Protection Agency, EPA440/5-84-002. Office of Water Regulations and Standards Division, Washington, D.C
    • US Environmental Protection Agency. 1986. Ambient water quality criteria for bacteria. EPA440/5-84-002. Office of Water Regulations and Standards Division, Washington, D.C.
    • (1986) Ambient Water Quality Criteria For Bacteria
  • 26
    • 34548622608 scopus 로고    scopus 로고
    • World Health Organization
    • World Health Organization. 2006. Mortality country fact sheet. http://www.who.int/whosis/mort/profiles/mort_searo_bgd_bangladesh.pdf
    • (2006) Mortality Country Fact Sheet


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.