Identification of methylated regions with peak search based on Poisson model from massively parallel methylated DNA immunoprecipitation-sequencing data

Electrophoresis

Volumn 31, Issue 21, 2010, Pages 3537-3544

  Yang, Yao ^a,b   Wang, Wei ^a,b   Li, Yanqiang ^a,b   Tu, Jing ^a,b   Bai, Yunfei ^a,b   Xiao, Pengfeng ^a,b   Zhang, Dingdong ^a,c   Lu, Zuhong ^a,b  

^a Southeast University   (China)

^b SOUTHEAST UNIVERSITY   (China)

^c JINLING INSTITUTE OF TECHNOLOGY   (China)

Author keywords

K562; Methylated DNA immunoprecipitation sequencing; Methylation; Peak search

Indexed keywords

ALKYLATION; CELL CULTURE; DNA SEQUENCES; GENE ENCODING; GENE EXPRESSION; METHYLATION;

DNA METHYLATION; EPIGENETIC MODIFICATION; GENES EXPRESSION; HIGH EFFICIENT; IMMUNOPRECIPITATIONS; MASSIVELY PARALLELS; METHYLATED DNA IMMUNOPRECIPITATION SEQUENCING; PEAK SEARCHES; POISSON MODEL; SEARCH-BASED;

DNA;

GENOMIC DNA;

ARTICLE; CONTROLLED STUDY; DNA DETERMINATION; DNA METHYLATION; DNA SEQUENCE; HIGH THROUGHPUT SCREENING; HUMAN; HUMAN CELL; IMMUNOPRECIPITATION; INTERMETHOD COMPARISON; LEUKEMIA CELL LINE; NEGATIVE BINOMIAL DISTRIBUTION; POISSON DISTRIBUTION; REPRODUCIBILITY; SEQUENCE ANALYSIS; STATISTICAL DISTRIBUTION; STATISTICAL MODEL;

EID: 77958547591     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.201000326     Document Type: Article

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