Ligands in PSI structures

Acta Crystallographica Section F: Structural Biology and Crystallization Communications

Volumn 66, Issue 10, 2010, Pages 1309-1316

  Kumar, Abhinav ^a,b   Chiu, Hsiu Ju ^a,b   Axelrod, Herbert L ^a,b   Morse, Andrew ^a,c   Elsliger, Marc André ^a,d   Wilson, Ian A ^a,d   Deacon, Ashley ^a,b  

^a Joint Center for Structural Genomics   (United States)

^b SLAC NATIONAL ACCELERATOR LABORATORY   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

data mining; ligands; protein ligand complexes; PSI; structural genomics

Indexed keywords

LIGAND;

ARTICLE; CHEMICAL STRUCTURE; GENETIC DATABASE; INTERNET; PROTEIN CONFORMATION; X RAY CRYSTALLOGRAPHY;

CRYSTALLOGRAPHY, X-RAY; DATABASES, GENETIC; INTERNET; LIGANDS; MODELS, MOLECULAR; PROTEIN CONFORMATION;

EID: 77958028054     PISSN: 17443091     EISSN: 17443091     Source Type: Journal    
DOI: 10.1107/S1744309110008092     Document Type: Article

References (22)

1. Axelrod, H. L. et al. (2010). Acta Cryst. F66, 1335-1346.
2. Bakolitsa, C. et al. (2010). Acta Cryst. F66, 1198-1204.
3. Bateman, A., Coggill, P. & Finn, R. D. (2010). Acta Cryst. F66, 1148-1152.
4. Binkowski, T. A., Joachimiak, A. & Liang, J. (2005). Protein Sci. 14, 2972-2981.
5. Chi, P.-H., Shyu, C.-R. & Xu, D. (2006). BMC Bioinformatics, 7, 362.
6. Dutta, S., Burkhardt, K., Young, J., Swaminathan, G. J., Matsuura, T., Henrick, K., Nakamura, H. & Berman, H. M. (2009). Mol. Biotechnol. 42, 1-13.
7. Feng, Z., Chen, L., Maddula, H., Akcan, O., Oughtred, R., Berman, H. M. & Westbrook, J. (2004). Bioinformatics, 20, 2153-2155.
8. Finn, R. D., Tate, J., Mistry, J., Coggill, P. C., Sammut, S. J., Hotz, H. R., Ceric, G., Forslund, K., Eddy, S. R., Sonnhammer, E. L. & Bateman, A. (2008). Nucleic Acids Res. 36, D281-D288.
9. Gibrat, J. F., Madej, T. & Bryant, S. H. (1996). Curr. Opin. Struct. Biol. 6, 377-385.
10. Holm, L., Kaariainen, S., Rosenstrom, P. & Schenkel, A. (2008). Bioinformatics, 24, 2780-2781.
11. Kleywegt, G. J. (2007). Acta Cryst. D63, 94-100.
12. Krishna, S. S.,Weekes, D., Bakolitsa, C., Elsliger, M.-A.,Wilson, I. A., Godzik, A. & Wooley, J. (2010). Acta Cryst. F66, 1143-1147.
13. Krissinel, E. & Henrick, K. (2004). Acta Cryst. D60, 2256-2268.
14. Laskowski, R. A., Watson, J. D. & Thornton, J. M. (2005a). J. Mol. Biol. 351, 614-626.
15. Laskowski, R. A., Watson, J. D. & Thornton, J. M. (2005b). Nucleic Acids Res. 33, W89-W93.
16. Levitt, M. (2007). Proc. Natl Acad. Sci. USA, 104, 3183-3188.
17. Martin, J. L. & McMillan, F. M. (2002). Curr. Opin. Struct. Biol. 12, 783-793.
18. Orengo, C. A., Jones, D. T. & Thornton, J. M. (1994). Nature (London), 372, 631-634.
19. Porter, C. T., Bartlett, G. J. & Thornton, J. M. (2004). Nucleic Acids Res. 32, D129-D133.
20. Rutherford, K., Parson,W.W. & Daggett, V. (2008). Biochemistry, 47, 893-901.
21. Weinshilboum, R.M., Otterness, D.M. & Szumlanski, C. L. (1999). Annu. Rev. Pharmacol. Toxicol. 39, 19-52.
22. Wong, D. L., Lesage, A., Siddall, B. & Funder, J. W. (1992). FASEB J. 6, 3310-3315.