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Volumn 29, Issue 10, 2010, Pages 734-747

Hydroxyl-functionalized DNAs with different linkers and their complmentary duplex stability

Author keywords

8 aza 7 deazaza 2 deoxyadenosine; hydroxypropargyl; hydroxypropenyl; oligodeoxynucleotides; Tert butyldiphenylsilyl; thermal stability

Indexed keywords

8 AZA 7 DEAZA 2' DEOXYADENOSINE DERIVATIVE; DEOXYADENOSINE DERIVATIVE; DOUBLE STRANDED DNA; HYDROXYL GROUP; OLIGODEOXYNUCLEOTIDE; PHOSPHORAMIDOUS ACID; UNCLASSIFIED DRUG;

EID: 77958005892     PISSN: 15257770     EISSN: 15322335     Source Type: Journal    
DOI: 10.1080/15257770.2010.510124     Document Type: Article
Times cited : (5)

References (17)
  • 1
    • 4544376496 scopus 로고    scopus 로고
    • Generation and enzymatic amplification of high-density functionalized DNA double strands
    • Jäger, S.; Famulok, M. Generation and enzymatic amplification of high-density functionalized DNA double strands. Angew. Chem. Int. Ed. 2004, 43, 3337-3340.
    • (2004) Angew. Chem. Int. Ed. , vol.43 , pp. 3337-3340
    • Jäger, S.1    Famulok, M.2
  • 2
    • 63249083854 scopus 로고    scopus 로고
    • Diene-modified nucleotides for the Diels-Alder-mediated functional tagging of DNA
    • Borsenberger, V.; Howorka, S. Diene-modified nucleotides for the Diels-Alder-mediated functional tagging of DNA. Nucleic Acids Res. 2009, 37, 1477-1485.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 1477-1485
    • Borsenberger, V.1    Howorka, S.2
  • 3
    • 67849104696 scopus 로고    scopus 로고
    • Investigation of the catalytic mechanism of a synthetic DNAzyme with protein-like functionality: An RNaseA mimic?
    • Thomas, J. M.; Yoon, J.-K.; Perrin, D. M. Investigation of the catalytic mechanism of a synthetic DNAzyme with protein-like functionality: an RNaseA mimic? J. Am. Chem. Soc. 2009, 131, 5648-5658.
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 5648-5658
    • Thomas, J.M.1    Yoon, J.-K.2    Perrin, D.M.3
  • 4
    • 75149174799 scopus 로고    scopus 로고
    • Hydroxyl-functionalized DNA: An efficient orthogonal protecting strategy and duplex stability
    • Zhang, D.; Xu, L.; Wei, X.; Li, Y.; He, J. L.; Liu, K. L. Hydroxyl-functionalized DNA: an efficient orthogonal protecting strategy and duplex stability. Nucleosides, Nucleotides and Nucleic Acids, 2009, 28, 924-942.
    • (2009) Nucleosides, Nucleotides and Nucleic Acids , vol.28 , pp. 924-942
    • Zhang, D.1    Xu, L.2    Wei, X.3    Li, Y.4    He, J.L.5    Liu, K.L.6
  • 5
    • 0012612171 scopus 로고    scopus 로고
    • Synthesis of 7-alkynylated 8-aza-7-deaza-2′-deoxyadenosines via the Pd-catalysed cross-coupling reaction
    • Seela, F.; Zulauf, M. Synthesis of 7-alkynylated 8-aza-7-deaza-2′- deoxyadenosines via the Pd-catalysed cross-coupling reaction. J. Chem. Soc, Perkin Trans 1 1998, 3233-3240.
    • (1998) J. Chem. Soc, Perkin Trans. , vol.1 , pp. 3233-3240
    • Seela, F.1    Zulauf, M.2
  • 6
    • 33845185176 scopus 로고
    • Palladium-catalyzed synthesis of alkynylamino nucleosides. A universal linker for nucleic acids
    • Hobbs, F. W. Palladium-catalyzed synthesis of alkynylamino nucleosides. A universal linker for nucleic acids. J. Org. Chem. 1989, 54, 3420-3422.
    • (1989) J. Org. Chem. , vol.54 , pp. 3420-3422
    • Hobbs, F.W.1
  • 7
    • 0034620188 scopus 로고    scopus 로고
    • Novel syntheses of (Z)-alkene and alkane basemodified nucleosides
    • Lee, S. E.; Vyle, J. S.; Williams, D. M.; Grasby, J. A. Novel syntheses of (Z)-alkene and alkane basemodified nucleosides. Tetrahedron Lett. 2000, 41, 267-270.
    • (2000) Tetrahedron. Lett. , vol.41 , pp. 267-270
    • Lee, S.E.1    Vyle, J.S.2    Williams, D.M.3    Grasby, J.A.4
  • 8
    • 14844351976 scopus 로고    scopus 로고
    • Aminofunctionalized DNA: The properties of C5-amino-alkyl substituted 2-deoxyuridines and their application in DNA triplex formation
    • Brazier, J. A.; Shibata, T.; Townsley, J.; Taylor, B. F.; Frary, E.; Williams, N. H.; Williams, D. M. Aminofunctionalized DNA: the properties of C5-amino-alkyl substituted 2-deoxyuridines and their application in DNA triplex formation. Nucleic Acids Res. 2005, 33, 1362-1371.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 1362-1371
    • Brazier, J.A.1    Shibata, T.2    Townsley, J.3    Taylor, B.F.4    Frary, E.5    Williams, N.H.6    Williams, D.M.7
  • 9
    • 27544440920 scopus 로고
    • Nucleic acid related compounds. 39. Efficient conversion of 5-iodo to 5-alkynyl and derived 5-substituted uracil bases and nucleosides
    • Robins, M. J.; Barr, P. J. Nucleic acid related compounds. 39. Efficient conversion of 5-iodo to 5-alkynyl and derived 5-substituted uracil bases and nucleosides. J. Org. Chem. 1983, 48, 1854-1862.
    • (1983) J. Org. Chem. , vol.48 , pp. 1854-1862
    • Robins, M.J.1    Barr, P.J.2
  • 10
    • 0002053987 scopus 로고
    • C-5 substituted pyrimidine nucleosides. 1. Synthesis of C-5 allyl, propyl, and propenyl uracil and cytosine nucleosides viaorganopalladium intermediates
    • Ruth, J. L.; Bergstrom, D. E. C-5 substituted pyrimidine nucleosides. 1. Synthesis of C-5 allyl, propyl, and propenyl uracil and cytosine nucleosides viaorganopalladium intermediates. J. Org. Chem. 1978, 43, 2870-2876.
    • (1978) J. Org. Chem. , vol.43 , pp. 2870-2876
    • Ruth, J.L.1    Bergstrom, D.E.2
  • 11
    • 0026783155 scopus 로고
    • Oligodeoxynucleotides containing C-5 propyne analogs of 2′-deoxyuridine and 2′-deoxycytidine
    • Froehler, B. C.; Wadwani, S.; Terhorst, T. J.; Gerrard, S. R. Oligodeoxynucleotides containing C-5 propyne analogs of 2′-deoxyuridine and 2′-deoxycytidine. Tetrahedron Lett. 1992, 33, 5307-5310.
    • (1992) Tetrahedron. Lett. , vol.33 , pp. 5307-5310
    • Froehler, B.C.1    Wadwani, S.2    Terhorst, T.J.3    Gerrard, S.R.4
  • 12
    • 0032125593 scopus 로고    scopus 로고
    • A comparative study of the thermal-stability of oligodeoxyribonucleotides containing 5-substituted 2′-deoxyuridines
    • Ahmadian, M.; Zhang, P. M.; Bergstrom, D. E. A comparative study of the thermal-stability of oligodeoxyribonucleotides containing 5-substituted 2′-deoxyuridines. Nucleic Acids Res. 1998, 26, 3127-3135.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 3127-3135
    • Ahmadian, M.1    Zhang, P.M.2    Bergstrom, D.E.3
  • 13
    • 0037114031 scopus 로고    scopus 로고
    • Propynyl groups in duplex DNA: Stability of base pairs incorporating 7-substituted 8-aza-7-deazapurines or 5-substituted pyrimidines
    • He, J. L.; Seela, F. Propynyl groups in duplex DNA: stability of base pairs incorporating 7-substituted 8-aza-7-deazapurines or 5-substituted pyrimidines. Nucleic Acids Res. 2002, 30, 5485-5496.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 5485-5496
    • He, J.L.1    Seela, F.2
  • 14
    • 0027462696 scopus 로고
    • Base-modified oligodeoxynucleotides. I. Effect of 5-alkyl, 5-(1-alkenyl) and5-(1-alkynyl) substitution of the pyrimidineson duplex stability and hydrophobicity
    • Sági, J.; Szemzö, A.; Ébinger, K.; Szabolcs, A.; Sági, G.; Ruff, É.; Ötvös, L. Base-modified oligodeoxynucleotides. I. Effect of 5-alkyl, 5-(1-alkenyl) and5-(1-alkynyl) substitution of the pyrimidineson duplex stability and hydrophobicity. Tetrahedron Lett. 1993, 34, 2191-2194.
    • (1993) Tetrahedron. Lett. , vol.34 , pp. 2191-2194
    • Sági, J.1    Szemzö, A.2    Ébinger, K.3    Szabolcs, A.4    Sági, G.5    Ruff, É.6    Ötvös, L.7
  • 16
    • 0242290881 scopus 로고    scopus 로고
    • DNA basepair step deformability inferred from molecular dynamics simulations
    • Lankaš, F.; Šponer, J.; Langowski, J.; Cheatham, III T. E. DNA basepair step deformability inferred from molecular dynamics simulations. Biophysical J. 2003, 85, 2872-2883.
    • (2003) Biophysical J. , vol.85 , pp. 2872-2883
    • Lankaš, F.1    Šponer, J.2    Langowski, J.3    Cheatham III, T.E.4
  • 17
    • 0033860365 scopus 로고    scopus 로고
    • Structure and hydration of BamHI DNA recognition site: A molecular dynamics investigation
    • Castrignano, T.; Chillemi, G.; Desideri, A. Structure and hydration of BamHI DNA recognition site: a molecular dynamics investigation. Biophysical J. 2000, 79, 1263-1272.
    • (2000) Biophysical J. , vol.79 , pp. 1263-1272
    • Castrignano, T.1    Chillemi, G.2    Desideri, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.