Structure and hydration of BamHI DNA recognition site: A molecular dynamics investigation

Biophysical Journal

Volumn 79, Issue 3, 2000, Pages 1263-1272

  Castrignano T ^a   Chillemi, G ^b   Desideri, A ^a  

^a UNIVERSITY OF ROME TOR VERGATA   (Italy)

^b SAPIENZA UNIVERSITY OF ROME   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; WATER;

ANALYTIC METHOD; ARTICLE; BASE PAIRING; DNA DETERMINATION; ELECTRICITY; HYDRATION; HYDROGEN BOND; MOLECULAR DYNAMICS; MOLECULAR RECOGNITION; SIMULATION; X RAY DIFFRACTION;

EID: 0033860365     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(00)76380-6     Document Type: Article

References (4)

1. Arnott, S., P. J. Campbell-Smith, and R. Chandrasekaran. 1976. Atomic coordinates and molecular conformations for DNA-DNA, RNA- RNA, and DNA- RNA helices. In CRC Handbook of Biochemistry and Molecular Biology, Vol. 2.CRC Press, Cleveland, OH. 411-422.
2. Berendsen, H. J. C., J. P. M. Postma, W. R van Gusteren, A. Di Nola, and J. R. Haak. 1984. Molecular dynamics with coupling to an external bath. J. Comput. Phys. 81:3684-3690.
3. Berman, H. M. 1994. Hydration of DNA: take 2. Curr. Opin. Struct. Biol. 4:345-350.
4. Beveridge, D. L., and G. Ravinshanker. 1994. Molecular dynamics study of DNA. Curr. Opin. Struct. Biol. 4:246-255.