Identifying multiple spatiotemporal patterns: A refined view on terrestrial photosynthetic activity

Pattern Recognition Letters

Volumn 31, Issue 14, 2010, Pages 2309-2317

  Mahecha, Miguel D ^a,b   Fürst, Lina M ^a,c   Gobron, Nadine ^d   Lange, Holger ^e  

^a MAX PLANCK INSTITUTE FOR BIOGEOCHEMISTRY   (Germany)

^b ETH Zurich   (Switzerland)

^c UNIVERSITY OF BAYREUTH   (Germany)

^d JOINT RESEARCH CENTRE   (Italy)

^e NORWEGIAN INSTITUTE OF BIOECONOMY RESEARCH   (Norway)

Author keywords

FAPAR; Isomap; Nonlinear dimensionality reduction; Singular spectrum analysis; Spatiotemporal data; Time series analysis

Indexed keywords

FAPAR; ISOMAP; NONLINEAR DIMENSIONALITY REDUCTION; SINGULAR SPECTRUM ANALYSIS; SPATIO-TEMPORAL DATA;

DATA HANDLING; INTERFEROMETRY; NONLINEAR ANALYSIS; REMOTE SENSING; SPECTRUM ANALYSIS; SPECTRUM ANALYZERS; SYSTEMS SCIENCE; TIME SERIES;

TIME SERIES ANALYSIS;

EID: 77957911665     PISSN: 01678655     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.patrec.2010.06.021     Document Type: Article

References (47)

1. 2 uptake enhancement induced by warmer springs Proc. Natl. Acad. Sci. 102 2005 823 827
2. A. Anyamba, C.J. Tucker, and R. Mahoney From El Niño to La Niña: Vegetation response patterns over East and Southern Africa during the 1997-2000 period J. Climate 15 2002 3096 3103
3. M. Balasubramanian, E.L. Schwartz, J.B. Tenenbaum, V. de Silva, and J. Langford The Isomap algorithm and topological stability Science 295 2002 7
4. S.M. Barbosa, M.E. Silva, and M.J. Fernandes Multi-scale variability patterns in NCEP/NCAR reanalysis sea-level pressure Theoret. Appl. Climatol. 96 2009 319 326
5. D.S. Broomhead, and G.P. King Extracting qualitative dynamics from experimental data Physica D 20 1986 217 236
6. T.F. Cox, and M.A.A. Cox Multidimensional Scaling vol. 45 2001 Chapman & Hall Boca Raton
7. E.W. Dijkstra A note on two problems in connexion with graphs Numer. Math. 1 1959 269 271
8. J.B. Elsner, and A.A. Tsonis Singular Spectrum Analysis A New Tool in Time Series Analysis 1996 Plenum Press New York
9. A.J. Gámez, C.S. Zhou, and J. Kurths Nonlinear dimensionality reduction in climate data Nonlinear Process. Geophys. 11 2004 393 398
10. M. Ghil, M.R. Allen, M.D. Dettinger, K. Ide, D. Kondrashov, M.E. Mann, A.W. Robertson, A. Saunders, Y. Tian, F. Varadi, and P. Yiou Advanced spectral methods for climatic time series Rev. Geophys. 40 2002 1003
11. N. Gobron, B. Pinty, O. Aussedat, J. Chen, W.B. Cohen, R. Fensholt, V. Gond, K.F. Hummerich, T. Lavergne, F. Mélin, J.L. Privette, I. Sandholt, M. Taberner, D.P. Turner, M.M. Verstraete, and J.-L. Widlowski Evaluation of fraction of absorbed photosynthetically active radiation products for different canopy radiation transfer regimes: Methodology and results using Joint Research Center products derived from SeaWiFS against ground-based estimations J. Geophys. Res. 111 2006 D13110
12. N. Golyandina, V. Nekrutkin, and A. Zhigljavsky Analysis of Time Series Structure: SSA and Related Techniques Monographs on Statistics and Applied Probability No. 90 2001 Chapman & Hall/CRC Boca Raton
13. M. Heimann, and M. Reichstein Terrestrial ecosystem carbon dynamics and climate feedbacks Nature 451 January 2008 289 292
14. W. Hsieh Nonlinear multivariate and time series analysis by neural network methods Rev. Geophys. 42 2004 1 25
15. N.E. Huang, Z. Shen, S.R. Long, M.L. Wu, H.H. Shih, Q. Zheng, N.C. Yen, C.C. Tung, and H.H. Liu The empirical mode decomposition and Hilbert spectrum for nonlinear and nonstationary time series analysis Proc. Roy. Soc. London A 454 1998 903 995
16. N.E. Huang, and Z. Wu A review on Hilbert-Huang transform: Method and its applications to geophysical studies Rev. Geophys. 6 2008 RG2006
17. M. Jung, M. Verstraete, N. Gobron, M. Reichstein, D. Papale, A. Bondeau, M. Robustelli, and B. Pinty Diagnostic assessment of European gross primary production Global Change Biol. 14 2008 2349 2364
18. F.A. Kogan Satellite-observed sensitivity of world land ecosystems to el niño/la niña Remote Sens. Environ. 74 2000 445 462
19. D. Kondrashov, and M. Ghil Spatio-temporal filling of missing data points in geophysical data sets Nonlinear Process. Geophys. 13 2006 151 159
20. M.D. Mahecha, A. Martínez, G. Lischeid, and E. Beck Nonlinear dimensionality reduction: Alternative ordination approaches for extracting and visualizing biodiversity patterns in tropical montane forest vegetation data Ecol. Inform. 2 2007 138 149
21. M.D. Mahecha, M. Reichstein, M. Jung, S.I. Seneviratne, S. Zaehle, C. Beer, M.C. Braakhekke, N. Carvalhais, H. Lange, G. Le Maire, and E. Moors Comparing observations and process-based simulations of biosphere-atmosphere exchanges on multiple time scales J. Geophys. Res. - Biogeosci. 115 2010 G02003 10.1029/2009JG001016
22. M.D. Mahecha, M. Reichstein, H. Lange, N. Carvalhais, C. Bernhofer, T. Grünwald, D. Papale, and G. Seufert Characterizing ecosystem-atmosphere interactions from short to interannual time scales Biogeosciences 4 2007 743 758 (Pubitemid 47421983)
23. M.D. Mahecha, and S. Schmidtlein Revealing biogeographical patterns by nonlinear ordinations and derived anisotropic spatial filters Global Ecol. Biogeogr. 17 2008 284 296
24. I. McCallum, W. Wagner, C. Schmullius, A. Shvidenko, M. Obersteiner, S. Fritza, and S. Nilsson Comparison of four global fapar datasets over northern eurasia for the year 2000 Remote Sens. Environ. 114 2010 941 949
25. N. Mekuz, and J. Tsotsos Parameterless Isomap with adaptive neighborhood selection K. Franke, K.-R. Müller, B. Nickolay, R. Schäfer, DAGM-Symposium Lecture Notes in Computer Science vol. 4174 2006 Springer 364 373
26. D. Meng, Y. Leung, Z. Xu, T. Fung, and Q. Zhan Improving geodesic distance estimation based on locally linear assumption Pattern Recognition Lett. 29 2008 862 870
27. E. Mjolsness, and D. DeCoste Machine learning for science: State of the art and future prospects Science 293 2001 2051 2055
28. M. New, D. Lister, M. Hulme, and I. Makin A high resolution data set of surface climate over global land areas Climate Res. 21 2002 1 25
29. H. Österle, F.W. Gerstengarbe, and P.C. Werner Homogenisierung und Aktualisierung des Klimadatensatzes der Climate Research Unit of East Anglia, Norwich (in German) Terra Nostra 6 2003 326 329
30. M. Paluš, and D. Novotná Quasi-biennial oscillations extracted from the monthly NAO index and temperature records are phase-synchronized Nonlinear Process. Geophys. 13 2006 287 296
31. J.N. Perry, A.M. Liebhold, M.S. Rosenberg, J. Dungan, M. Miriti, and S. Citron-Pousty Illustrations and guidelines for selecting statistical methods for quantifying spatial pattern in ecological data Ecography 25 2002 578 600
32. S.L. Piao, P. Ciais, P. Friedlingstein, P. Peylin, M. Reichstein, S. Luyssaert, H. Margolis, J.Y. Fang, A. Barr, A.P. Chen, A. Grelle, D.Y. Hollinger, T. Laurila, A. Lindroth, A.D. Richardson, and T. Vesala Net carbon dioxide losses of northern ecosystems in response to autumn warming Nature 451 2008 49 52
33. C. Potter, S. Boriah, M. Steinbach, V. Kumar, and S. Klooster Terrestrial vegetation dynamics and global climate controls Climate Dynam. 31 2008 67 78
34. B. Schölkopf, A.J. Smola, and K.-R. Müuller Nonlinear component analysis as a kernel eigenvalue problem Neural Comput. 10 1998 1299 1319
35. J. Seixas, N. Carvalhais, C. Nunes, and A. Benali Comparative analysis of MODIS-FAPAR and MERIS-MGVI datasets: Potential impacts on ecosystem modeling Remote Sens. Environ. 113 2009 2547 2559
36. P.K. Sen Estimates of the regression coefficient based on Kendall's tau J. Amer. Statist. Assoc. 63 1968 1379 1389
37. A.R. Stine, P. Huybers, and I.Y. Fung Changes in the phase of the annual cycle of surface temperature Nature 457 2009 435 440
38. 2 in relation to climate: A cross-biome analysis across multiple time scales Biogeosciences 6 10 2009 2297 2312
39. J.B. Tenenbaum, V. de Silva, and J.C. Langford A global geometric framework for nonlinear dimensionality reduction Science 290 2000 2319 2323
40. C. Torrence, and G.P. Compo A practical guide to wavelet analysis Bull. Amer. Meteorol. Soc. 79 1998 61 79
41. L.J.P. van der Maaten, E.O. Postma, and H.J. van den Herik Dimensionality reduction: A comparative review J. Machine Learn. Res. 10 2009 1 41
42. V. Venema, S. Bachner, H.W. Rust, and C. Simmer Statistical characteristics of surrogate data based on geophysical measurements Nonlinear Process. Geophys. 13 4 2006 449 466
43. U. Weber, M. Jung, M. Reichstein, C. Beer, M.C. Braakhekke, V. Lehsten, D. Ghent, J. Kaduk, N. Viovy, P. Ciais, N. Gobron, and C. Rdenbeck The interannual variability of africa's ecosystem productivity: A multi-model analysis Biogeosciences 6 2 2009 285 295
44. G. Wen, L. Jiang, and J. Wen Using locally estimated geodesic distance to optimize neighborhood graph for isometric data embedding Pattern Recognition 41 2008 2226 2236
45. M. Williamson The ordination of incidence data J. Ecol. 66 1978 911 920
46. P. Yiou, D. Sornette, and M. Ghil Data-adaptive wavelets and multi-scale singular-spectrum analysis Physica D 142 2000 254 290
47. H. Zhan Scaling in global ocean chlorophyll fluctuations Geophys. Res. Lett. 35 2008 L01606