메뉴 건너뛰기




Volumn 5, Issue 8, 2010, Pages

Inferring geographic coordinates of origin for Europeans using small panels of ancestry informative markers

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONTROLLED STUDY; EUROPE; GENETIC ALGORITHM; GENETIC ANALYSIS; GENETIC DISTANCE; GENETIC MARKER; GENETIC VARIABILITY; GENOTYPE; GEOGRAPHIC ORIGIN; GEOGRAPHY; HUMAN; PLESIOMORPHY; POPULATION GENETIC STRUCTURE; SINGLE NUCLEOTIDE POLYMORPHISM; VALIDATION PROCESS; ALGORITHM; CAUCASIAN; FACTUAL DATABASE; GENETICS; PRINCIPAL COMPONENT ANALYSIS; REPRODUCIBILITY;

EID: 77957857734     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0011892     Document Type: Article
Times cited : (35)

References (27)
  • 1
    • 33747195608 scopus 로고    scopus 로고
    • Origins and evolution of the Europeans' genome: Evidence from multiple microsatellite loci
    • Belle E, Landry P, Barboujani G (2006) Origins and evolution of the Europeans' genome: Evidence from multiple microsatellite loci. Proc Biol Sci 273: 1595-1602.
    • (2006) Proc Biol Sci , vol.273 , pp. 1595-1602
    • Belle, E.1    Landry, P.2    Barboujani, G.3
  • 4
    • 2442585696 scopus 로고    scopus 로고
    • The effects of human population structure on large genetic association studies
    • Marchini J, Cardon L, Phillips M, Donnelly P (2004) The effects of human population structure on large genetic association studies. Nat Genet 36: 512-517.
    • (2004) Nat Genet , vol.36 , pp. 512-517
    • Marchini, J.1    Cardon, L.2    Phillips, M.3    Donnelly, P.4
  • 5
    • 23044468633 scopus 로고    scopus 로고
    • Demonstrating stratification in a European American population
    • Campbell C, Ogburn E, Lunetta K, Lyon H, Freedman M, et al. (2005) Demonstrating stratification in a European American population. Nat Genet 37: 868-872.
    • (2005) Nat Genet , vol.37 , pp. 868-872
    • Campbell, C.1    Ogburn, E.2    Lunetta, K.3    Lyon, H.4    Freedman, M.5
  • 6
    • 39749181521 scopus 로고    scopus 로고
    • Worldwide human relationships inferred from genome-wide patterns of variation
    • Li JZ, Absher DM, Tang H, Southwick AM, Casto AM, et al. (2008) Worldwide human relationships inferred from genome-wide patterns of variation. Science 319: 1100-1104.
    • (2008) Science , vol.319 , pp. 1100-1104
    • Li, J.Z.1    Absher, D.M.2    Tang, H.3    Southwick, A.M.4    Casto, A.M.5
  • 7
    • 65149089174 scopus 로고    scopus 로고
    • Genome-wide insights into the patterns and determinants of fine-scale population structure in humans
    • Biswas S, Scheinfeldt LB, Akey JM (2009) Genome-wide insights into the patterns and determinants of fine-scale population structure in humans. Am J Hum Genet 84: 641-650.
    • (2009) Am J Hum Genet , vol.84 , pp. 641-650
    • Biswas, S.1    Scheinfeldt, L.B.2    Akey, J.M.3
  • 8
    • 34848879778 scopus 로고    scopus 로고
    • PCA-correlated SNPs for structure identification in worldwide human populations
    • Paschou P, Ziv E, Burchard EG, Choudhry S, Rodriguez-Cintron W, et al. (2007) PCA-correlated SNPs for structure identification in worldwide human populations. PLoS Genet 3: 1672-86.
    • (2007) PLoS Genet , vol.3 , pp. 1672-1686
    • Paschou, P.1    Ziv, E.2    Burchard, E.G.3    Choudhry, S.4    Rodriguez-Cintron, W.5
  • 9
    • 48249148358 scopus 로고    scopus 로고
    • Tracing sub-structure in the European American population with PCA-informative markers
    • Paschou P, Drineas P, Lewis J, Nievergelt CM, Nickerson DA, et al. (2008) Tracing sub-structure in the European American population with PCA-informative markers. PLoS Genet 4: e1000114.
    • (2008) PLoS Genet , vol.4
    • Paschou, P.1    Drineas, P.2    Lewis, J.3    Nievergelt, C.M.4    Nickerson, D.A.5
  • 10
    • 38949104183 scopus 로고    scopus 로고
    • Discerning the ancestry of European Americans in genetic association studies
    • Price A, Butler J, Patterson N, Capelli C, Pascali V, et al. (2008) Discerning the ancestry of European Americans in genetic association studies. PLoS Genet 4: e236.
    • (2008) PLoS Genet , vol.4
    • Price, A.1    Butler, J.2    Patterson, N.3    Capelli, C.4    Pascali, V.5
  • 11
    • 38949212271 scopus 로고    scopus 로고
    • Analysis and application of European genetic substructure using 300 K SNP information
    • Tian C, Plenge R, Ransom M, Lee A, Villoslada P, et al. (2008) Analysis and application of European genetic substructure using 300 K SNP information. PLoS Genet 4: e4.
    • (2008) PLoS Genet , vol.4
    • Tian, C.1    Plenge, R.2    Ransom, M.3    Lee, A.4    Villoslada, P.5
  • 12
    • 33749372240 scopus 로고    scopus 로고
    • European population substructure: Clustering of northern and southern populations
    • Seldin M, Shigeta R, Villoslada P, Selmi C, Tuomilehto J, et al. (2006) European population substructure: clustering of northern and southern populations. PLoS Genet 2: e143.
    • (2006) PLoS Genet , vol.2
    • Seldin, M.1    Shigeta, R.2    Villoslada, P.3    Selmi, C.4    Tuomilehto, J.5
  • 13
    • 34247602437 scopus 로고    scopus 로고
    • Measuring European Population Stratification with Microarray Genotype Data
    • Bauchet M, McEvoy B, Pearson L, Quillen E, Sarkisian T, et al. (2007) Measuring European Population Stratification with Microarray Genotype Data. Am J Hum Genet 80: 948-956.
    • (2007) Am J Hum Genet , vol.80 , pp. 948-956
    • Bauchet, M.1    McEvoy, B.2    Pearson, L.3    Quillen, E.4    Sarkisian, T.5
  • 14
    • 49649084390 scopus 로고    scopus 로고
    • Correlation between genetic and geographic structure in Europe
    • Lao O, Lu TT, Nothnagel M, Junge O, Freitag-Wolf S, et al. (2008) Correlation between genetic and geographic structure in Europe. Curr Biol 18: 1241-1248.
    • (2008) Curr Biol , vol.18 , pp. 1241-1248
    • Lao, O.1    Lu, T.T.2    Nothnagel, M.3    Junge, O.4    Freitag-Wolf, S.5
  • 16
    • 56749169214 scopus 로고    scopus 로고
    • Investigation of the fine structure of European populations with applications to disease association studies
    • Heath SC, Gut IG, Brennan P, McKay JD, Bencko V, et al. (2008) Investigation of the fine structure of European populations with applications to disease association studies. Eur J Hum Genet 16: 1413-1429.
    • (2008) Eur J Hum Genet , vol.16 , pp. 1413-1429
    • Heath, S.C.1    Gut, I.G.2    Brennan, P.3    McKay, J.D.4    Bencko, V.5
  • 17
    • 66049120176 scopus 로고    scopus 로고
    • Geographical structure and differential natural selection among North European populations
    • McEvoy BP, Montgomery GW, McRae AF, Ripatti S, Perola M, et al. (2009) Geographical structure and differential natural selection among North European populations. Genome Res 19: 804-814.
    • (2009) Genome Res , vol.19 , pp. 804-814
    • McEvoy, B.P.1    Montgomery, G.W.2    McRae, A.F.3    Ripatti, S.4    Perola, M.5
  • 18
    • 50949096560 scopus 로고    scopus 로고
    • The Population Reference Sample, POPRES: A resource for population, disease, and pharmacological genetics research
    • Nelson MR, Bryc K, King KS, Indap A, Boyko AR, et al. (2008) The Population Reference Sample, POPRES: a resource for population, disease, and pharmacological genetics research. Am J Hum Genet 83: 347-358.
    • (2008) Am J Hum Genet , vol.83 , pp. 347-358
    • Nelson, M.R.1    Bryc, K.2    King, K.S.3    Indap, A.4    Boyko, A.R.5
  • 19
    • 0032472024 scopus 로고    scopus 로고
    • Estimating African American admixture proportions by use of population-specific alleles
    • Parra E, Marcini A, Akey J, Martinson J, Batzer M, et al. (1998) Estimating African American admixture proportions by use of population-specific alleles. Am J Hum Genet 63: 1839-1851.
    • (1998) Am J Hum Genet , vol.63 , pp. 1839-1851
    • Parra, E.1    Marcini, A.2    Akey, J.3    Martinson, J.4    Batzer, M.5
  • 20
    • 0036177839 scopus 로고    scopus 로고
    • Ethnic-difference markers for use in mapping by admixture linkage disequilibrium
    • Collins-Schramm H, Phillips C, Operario D, Lee J, Weber J, et al. (2002) Ethnic-difference markers for use in mapping by admixture linkage disequilibrium. Am J Hum Genet 70: 737-750.
    • (2002) Am J Hum Genet , vol.70 , pp. 737-750
    • Collins-Schramm, H.1    Phillips, C.2    Operario, D.3    Lee, J.4    Weber, J.5
  • 22
    • 84890417804 scopus 로고
    • The genetical structure of populations
    • Wright S (1951) The genetical structure of populations. Ann Eugen 15: 323-354.
    • (1951) Ann Eugen , vol.15 , pp. 323-354
    • Wright, S.1
  • 23
    • 0032231748 scopus 로고    scopus 로고
    • Mapping genes that underlie ethnic differences in disease risk: Methods for detecting linkage in admixed populations, by conditioning on parental admixture
    • McKeigue P (1998) Mapping genes that underlie ethnic differences in disease risk: methods for detecting linkage in admixed populations, by conditioning on parental admixture. Am J Hum Genet 63: 241-251.
    • (1998) Am J Hum Genet , vol.63 , pp. 241-251
    • McKeigue, P.1
  • 24
    • 0347362518 scopus 로고    scopus 로고
    • Informativeness of genetic markers for inference of ancestry
    • Rosenberg N, Li L, Ward R, Pritchard J (2003) Informativeness of genetic markers for inference of ancestry. Am J Hum Genet 73: 1402-1422.
    • (2003) Am J Hum Genet , vol.73 , pp. 1402-1422
    • Rosenberg, N.1    Li, L.2    Ward, R.3    Pritchard, J.4
  • 25
    • 73249114022 scopus 로고    scopus 로고
    • European Population Genetic Substructure: Further Definition of Ancestry Informative Markers for Distinguishing among Diverse European Ethnic Groups
    • Tian C, Kosoy R, Nassir R, Lee A, Villoslada P, et al. (2009) European Population Genetic Substructure: Further Definition of Ancestry Informative Markers for Distinguishing among Diverse European Ethnic Groups. Mol Med 15: 371-383.
    • (2009) Mol Med , vol.15 , pp. 371-383
    • Tian, C.1    Kosoy, R.2    Nassir, R.3    Lee, A.4    Villoslada, P.5
  • 26
    • 0037136537 scopus 로고    scopus 로고
    • The effect of infections on susceptibility to autoimmune and allergic diseases
    • Bach J (2002) The effect of infections on susceptibility to autoimmune and allergic diseases. N Engl J Med 347: 911-920.
    • (2002) N Engl J Med , vol.347 , pp. 911-920
    • Bach, J.1
  • 27
    • 35349012592 scopus 로고    scopus 로고
    • Genome-wide detection and characterization of positive selection in human populations
    • Sabeti PC, Varilly P, Fry B, Lohmueller J, Hostetter E, et al. (2007) Genome-wide detection and characterization of positive selection in human populations. Nature 449: 913-918.
    • (2007) Nature , vol.449 , pp. 913-918
    • Sabeti, P.C.1    Varilly, P.2    Fry, B.3    Lohmueller, J.4    Hostetter, E.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.