RNA virus replication complexes

PLoS Pathogens

Volumn 6, Issue 7, 2010, Pages 1-3

  Tao, Yizhi Jane ^a   Ye, Qiaozhen ^a  

^a RICE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC RNA; HELICASE; RIBONUCLEOPROTEIN; VIRUS PROTEIN; VIRUS RNA;

ARTICLE; BINDING SITE; CRYSTALLOGRAPHY; HOST CELL; INTRACELLULAR MEMBRANE; NONHUMAN; PICORNAVIRUS INFECTION; POLYADENYLATION; POLYMERIZATION; RNA REPLICATION; RNA SYNTHESIS; RNA VIRUS; VIRUS CAPSID; VIRUS GENOME; BIOSYNTHESIS; GENETICS; PHYSIOLOGY; VIRUS REPLICATION;

RNA VIRUSES;

GENOME, VIRAL; RNA VIRUSES; RNA, VIRAL; VIRUS REPLICATION;

EID: 77957688108     PISSN: 15537366     EISSN: 15537374     Source Type: Journal    
DOI: 10.1371/journal.ppat.1000943     Document Type: Article

References (28)

1. Ball LA (2007) Virus Replication Strategies. In: Knipe D, Howley P, eds. Fields Virology, 5 ed. Philadelphia: Lippincott Williams & Wilkins. pp 120-140.
2. Salonen A, Ahola T, Kaariainen L (2005) Viral RNA replication in association with cellular membranes. Curr Top Microbiol Immunol 285: 139-173.
3. Egger D, Teterina N, Ehrenfeld E, Bienz K (2000) Formation of the poliovirus replication complex requires coupled viral translation, vesicle production, and viral RNA synthesis. J Virol 74: 6570-6580.
4. Lyle JM, Bullitt E, Bienz K, Kirkegaard K (2002) Visualization and functional analysis of RNA-dependent RNA polymerase lattices. Science 296: 2218-2222.
5. Kopek BG, Perkins G, Miller DJ, Ellisman MH, Ahlquist P (2007) Threedimensional analysis of a viral RNA replication complex reveals a virus-induced mini-organelle. PLoS Biol 5: e220. doi:10.1371/journal.pbio.0050220.
6. Ng KK, Arnold JJ, Cameron CE (2008) Structure-function relationships among RNA-dependent RNA polymerases. Curr Top Microbiol Immunol 320: 137-156.
7. Ferrer-Orta C, Arias A, Agudo R, Perez-Luque R, Escarmis C, et al. (2006) The structure of a protein primer-polymerase complex in the initiation of genome replication. Embo J 25: 880-888.
8. Reinisch KM, Nibert ML, Harrison SC (2000) Structure of the reovirus core at 3.6 A resolution. Nature 404: 960-967.
9. Grimes JM, Burroughs JN, Gouet P, Diprose JM, Malby R, et al. (1998) The atomic structure of the bluetongue virus core. Nature 395: 470-478.
10. Nakagawa A, Miyazaki N, Taka J, Naitow H, Ogawa A, et al. (2003) The atomic structure of rice dwarf virus reveals the self-assembly mechanism of component proteins. Structure 11: 1227-1238.
11. Coulibaly F, Chevalier C, Gutsche I, Pous J, Navaza J, et al. (2005) The birnavirus crystal structure reveals structural relationships among icosahedral viruses. Cell 120: 761-772.
12. Naitow H, Tang J, Canady M, Wickner RB, Johnson JE (2002) L-A virus at 3.4 A resolution reveals particle architecture and mRNA decapping mechanism. Nat Struct Biol 9: 725-728.
13. Pan J, Dong L, Lin L, Ochoa WF, Sinkovits RS, et al. (2009) Atomic structure reveals the unique capsid organization of a dsRNA virus. Proc Natl Acad Sci U S A 106: 4225-4230.
14. Duquerroy S, Da Costa B, Henry C, Vigouroux A, Libersou S, et al. (2009) The picobirnavirus crystal structure provides functional insights into virion assembly and cell entry. Embo J 28: 1655-1665.
15. Zhang X, Walker SB, Chipman PR, Nibert ML, Baker TS (2003) Reovirus polymerase lambda 3 localized by cryo-electron microscopy of virions at a resolution of 7.6 A. Nat Struct Biol 10: 1011-1018.
16. McDonald SM, Tao YJ, Patton JT (2009) The ins and outs of four-tunneled Reoviridae RNA-dependent RNA polymerases. Curr Opin Struct Biol 19: 775-782.
17. Coloma R, Valpuesta JM, Arranz R, Carrascosa JL, Ortin J, et al. (2009) The structure of a biologically active influenza virus ribonucleoprotein complex. PLoS Pathog 5: e1000491. doi:10.1371/journal.ppat.1000491.
18. Yuan P, Bartlam M, Lou Z, Chen S, Zhou J, et al. (2009) Crystal structure of an avian influenza polymerase PA(N) reveals an endonuclease active site. Nature 458: 909-913.
19. Dias A, Bouvier D, Crepin T, McCarthy AA, Hart DJ, et al. (2009) The capsnatching endonuclease of influenza virus polymerase resides in the PA subunit. Nature 458: 914-918.
20. Guilligay D, Tarendeau F, Resa-Infante P, Coloma R, Crepin T, et al. (2008) The structural basis for cap binding by influenza virus polymerase subunit PB2. Nat Struct Mol Biol 15: 500-506.
21. Newcomb LL, Kuo RL, Ye Q, Jiang Y, Tao YJ, et al. (2009) Interaction of the influenza a virus nucleocapsid protein with the viral RNA polymerase potentiates unprimed viral RNA replication. J Virol 83: 29-36.
22. Vreede FT, Jung TE, Brownlee GG (2004) Model suggesting that replication of influenza virus is regulated by stabilization of replicative intermediates. J Virol 78: 9568-9572.
23. Jorba N, Coloma R, Ortin J (2009) Genetic trans-complementation establishes a new model for influenza virus RNA transcription and replication. PLoS Pathog 5: e1000462. doi:10.1371/journal.ppat.1000462.
24. Whelan SP, Barr JN, Wertz GW (2004) Transcription and replication of nonsegmented negative-strand RNA viruses. Curr Top Microbiol Immunol 283:61-119.
25. Green TJ, Zhang X, Wertz GW, Luo M (2006) Structure of the vesicular stomatitis virus nucleoprotein-RNA complex. Science 313: 357-360.
26. Albertini AA, Wernimont AK, Muziol T, Ravelli RB, Clapier CR, et al. (2006) Crystal structure of the rabies virus nucleoprotein-RNA complex. Science 313: 360-363.
27. Tawar RG, Duquerroy S, Vonrhein C, Varela PF, Damier-Piolle L, et al. (2009) Crystal structure of a nucleocapsid-like nucleoprotein-RNA complex of respiratory syncytial virus. Science 326: 1279-1283.
28. Green TJ, Luo M (2009) Structure of the vesicular stomatitis virus nucleocapsid in complex with the nucleocapsid-binding domain of the small polymerase cofactor, P. Proc Natl Acad Sci U S A 106: 11713-11718.