메뉴 건너뛰기




Volumn 308, Issue SUPPL.1, 2010, Pages

PCR multiplex tool with 10 microsatellites for the European seabass (Dicentrarchus labrax) - Applications in genetic differentiation of populations and parental assignment

Author keywords

Aquaculture; Dicentrarchus labrax; European seabass; Microsatellites; PCR multiplex

Indexed keywords

COMMERCIAL SPECIES; FISH CULTURE; GENETIC DIFFERENTIATION; GENETIC MARKER; PERCIFORM; POLYMERASE CHAIN REACTION; STOCK ASSESSMENT; WILD POPULATION;

EID: 77957342040     PISSN: 00448486     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.aquaculture.2010.06.032     Document Type: Article
Times cited : (9)

References (37)
  • 1
    • 0030911468 scopus 로고    scopus 로고
    • Genetic structure and allozyme variation of sea bass (Dicentrarchus labrax and Dicentrarchus punctatus) in the Mediterranean Sea
    • Allegrucci G., Fortunato C., Sbordoni V. Genetic structure and allozyme variation of sea bass (Dicentrarchus labrax and Dicentrarchus punctatus) in the Mediterranean Sea. Mar. Biol. 1997, 128:347-358.
    • (1997) Mar. Biol. , vol.128 , pp. 347-358
    • Allegrucci, G.1    Fortunato, C.2    Sbordoni, V.3
  • 2
    • 0034616533 scopus 로고    scopus 로고
    • Fragmentation of sea bass populations in the western and eastern Mediterranean as revealed by microsatellite polymorphism
    • Bahri-Sfar L., Lemaire C., Ben Hassine O.K., Bonhomme F. Fragmentation of sea bass populations in the western and eastern Mediterranean as revealed by microsatellite polymorphism. Proc. Biol. Sci. 2000, 267(1446):929-935.
    • (2000) Proc. Biol. Sci. , vol.267 , Issue.1446 , pp. 929-935
    • Bahri-Sfar, L.1    Lemaire, C.2    Ben Hassine, O.K.3    Bonhomme, F.4
  • 3
    • 16244362398 scopus 로고    scopus 로고
    • Impact de l'élevage sur la structure génétique des populations méditerranéennes de Dicentrarchus labrax
    • Bahri-Sfar L., Lemaire C., Chatain B., Divanach P., Ben Hassine O.K., Bonhomme F. Impact de l'élevage sur la structure génétique des populations méditerranéennes de Dicentrarchus labrax. Aquat. Liv. Res. 2005, 18:71-76.
    • (2005) Aquat. Liv. Res. , vol.18 , pp. 71-76
    • Bahri-Sfar, L.1    Lemaire, C.2    Chatain, B.3    Divanach, P.4    Ben Hassine, O.K.5    Bonhomme, F.6
  • 4
    • 0019302053 scopus 로고
    • Construction of a genetic linkage map in man using restriction fragment length polymorphisms
    • Botstein D., White R.L., Skolnick M.H., Davies R.W. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. American Journal of Human Genetics 1980, 32:314-331.
    • (1980) American Journal of Human Genetics , vol.32 , pp. 314-331
    • Botstein, D.1    White, R.L.2    Skolnick, M.H.3    Davies, R.W.4
  • 5
    • 33845592408 scopus 로고    scopus 로고
    • Genetic differentiation between close eastern Mediterranean Dicentrarchus labrax (L.) populations
    • Castilho R., Ciftci Y. Genetic differentiation between close eastern Mediterranean Dicentrarchus labrax (L.) populations. J. Fish Biol. 2005, 67:1746-1752.
    • (2005) J. Fish Biol. , vol.67 , pp. 1746-1752
    • Castilho, R.1    Ciftci, Y.2
  • 6
    • 0032052847 scopus 로고    scopus 로고
    • Two polymorphic microsatellite markers in the European seabass, Dicentrarchus labrax (L.)
    • Castilho R., McAndrew B.J. Two polymorphic microsatellite markers in the European seabass, Dicentrarchus labrax (L.). Anim. Genet. 1998, 29(2):151-152.
    • (1998) Anim. Genet. , vol.29 , Issue.2 , pp. 151-152
    • Castilho, R.1    McAndrew, B.J.2
  • 7
    • 0032212050 scopus 로고    scopus 로고
    • Population structure of seabass in Portugal, evidence from allozymes
    • Castilho R., McAndrew B.J. Population structure of seabass in Portugal, evidence from allozymes. J. Fish Biol. 1998, 53:1038-1049.
    • (1998) J. Fish Biol. , vol.53 , pp. 1038-1049
    • Castilho, R.1    McAndrew, B.J.2
  • 8
    • 84894295182 scopus 로고    scopus 로고
    • Review on breeding and reproduction of European aquaculture species. European seabass (Dicentrarchus labrax L.)
    • FP6-2005-SSP-044424
    • Chavanne H., Chatain B., Haffray P. Review on breeding and reproduction of European aquaculture species. European seabass (Dicentrarchus labrax L.). Aqua breeding 2008, FP6-2005-SSP-044424.
    • (2008) Aqua breeding
    • Chavanne, H.1    Chatain, B.2    Haffray, P.3
  • 12
    • 18744377555 scopus 로고    scopus 로고
    • More polymorphic microsatellite markers in the European sea bass (Dicentrarchus labrax L.)
    • Ciftci Y., Castilho R., McAndrew B.J. More polymorphic microsatellite markers in the European sea bass (Dicentrarchus labrax L.). Mol. Ecol. 2002, 2:575-576.
    • (2002) Mol. Ecol. , vol.2 , pp. 575-576
    • Ciftci, Y.1    Castilho, R.2    McAndrew, B.J.3
  • 13
    • 0001455119 scopus 로고    scopus 로고
    • Probmax: a computer program for assigning unknown parentage in pedigree analysis from known genotypic pools of parents and progeny
    • Danzmann R.G. Probmax: a computer program for assigning unknown parentage in pedigree analysis from known genotypic pools of parents and progeny. J. Hered. 1997, 88:33.
    • (1997) J. Hered. , vol.88 , pp. 33
    • Danzmann, R.G.1
  • 16
    • 0033560102 scopus 로고    scopus 로고
    • Optimization of semi-automated microsatellite multiplex polymerase chain reaction systems for rainbow trout (Oncorhynchus mykiss)
    • Fishback A.G., Danzmann R.G., Sakamoto T., Ferguson M.M. Optimization of semi-automated microsatellite multiplex polymerase chain reaction systems for rainbow trout (Oncorhynchus mykiss). Aquaculture 1999, 172:247-254.
    • (1999) Aquaculture , vol.172 , pp. 247-254
    • Fishback, A.G.1    Danzmann, R.G.2    Sakamoto, T.3    Ferguson, M.M.4
  • 17
    • 0029257467 scopus 로고
    • Development and use of microsatellite markers in sea bass, Dicentrarchus labrax (Linnaeus, 1758) (Perciformes: Serrandidae)
    • García de León F.J., Dallas J.F., Chatain B., Canonne M., Versini J.J., Bonhomme F. Development and use of microsatellite markers in sea bass, Dicentrarchus labrax (Linnaeus, 1758) (Perciformes: Serrandidae). Mol. Mar. Biol. Biotechnol. 1995, 4(1):62-68.
    • (1995) Mol. Mar. Biol. Biotechnol. , vol.4 , Issue.1 , pp. 62-68
    • García de León, F.J.1    Dallas, J.F.2    Chatain, B.3    Canonne, M.4    Versini, J.J.5    Bonhomme, F.6
  • 18
    • 0031051940 scopus 로고    scopus 로고
    • Microsatellite polymorphism and population subdivision in natural populations of European sea bass Dicentrarchus labrax (Linnaeus, 1758)
    • García de León F.J., Chikhi L., Bonhomme F. Microsatellite polymorphism and population subdivision in natural populations of European sea bass Dicentrarchus labrax (Linnaeus, 1758). Mol. Ecol. 1997, 6:51-62.
    • (1997) Mol. Ecol. , vol.6 , pp. 51-62
    • García de León, F.J.1    Chikhi, L.2    Bonhomme, F.3
  • 19
    • 3242788770 scopus 로고    scopus 로고
    • Culture performance of different strains and crosses of the European sea bass (Dicentrarchus labrax) reared under controlled conditions at Eilat, Israel
    • Gorshkov S., Gorshkova G., Meiri I., Gordin H. Culture performance of different strains and crosses of the European sea bass (Dicentrarchus labrax) reared under controlled conditions at Eilat, Israel. J. Appl. Ichthyol. 2004, 20:194-203.
    • (2004) J. Appl. Ichthyol. , vol.20 , pp. 194-203
    • Gorshkov, S.1    Gorshkova, G.2    Meiri, I.3    Gordin, H.4
  • 21
    • 77957369478 scopus 로고    scopus 로고
    • European sea bass - Dicentrarchus labrax. In: Genetic Effects of Domestication, Culture and Breeding of Fish and Shellfish, and Their Impacts on Wild Populations. In: Svaasand, T., Crosetti, D., Garcia-Vazquez, E., Verspoor, E. (Eds.), Evaluation of Genetic Impact of
    • Haffray, P., Tsigenopoulos, C. S., Bonhomme, F., Chatain, B., Magoulas, A., Rye, M., Triantafyllidis A., Triantaphyllidis, C., 2006. European sea bass - Dicentrarchus labrax. In: Genetic Effects of Domestication, Culture and Breeding of Fish and Shellfish, and Their Impacts on Wild Populations. In: Svaasand, T., Crosetti, D., Garcia-Vazquez, E., Verspoor, E. (Eds.), Evaluation of Genetic Impact of Aquaculture Activities on Native Populations. A European network. GENIMPACT Final Report (EU contract. RICA-CT-2005-022802. http://www.genimpact.imr.no.
    • (2006)
    • Haffray, P.1    Tsigenopoulos, C.S.2    Bonhomme, F.3    Chatain, B.4    Magoulas, A.5    Rye, M.6    Triantafyllidis, A.7    Triantaphyllidis, C.8
  • 23
    • 0034047552 scopus 로고    scopus 로고
    • Do discrepancies between microsatellite and allozyme variation reveal differential selection between sea and lagoon in the sea bass (Dicentrarchus labrax)?
    • Lemaire C., Allegrucci G., Naciri M., Bahri-Sfar L., Kara H., Bonhomme F. Do discrepancies between microsatellite and allozyme variation reveal differential selection between sea and lagoon in the sea bass (Dicentrarchus labrax)?. Mol. Ecol. 2000, 9:457-467.
    • (2000) Mol. Ecol. , vol.9 , pp. 457-467
    • Lemaire, C.1    Allegrucci, G.2    Naciri, M.3    Bahri-Sfar, L.4    Kara, H.5    Bonhomme, F.6
  • 24
    • 12744261322 scopus 로고    scopus 로고
    • Maintenance of genetic differentiation across a transition zone in the sea: discordance between nuclear and cytoplasmic markers
    • Lemaire C., Versini J.J., Bonhomme F. Maintenance of genetic differentiation across a transition zone in the sea: discordance between nuclear and cytoplasmic markers. J. Evol. Biol. 2005, 18(1):70-80.
    • (2005) J. Evol. Biol. , vol.18 , Issue.1 , pp. 70-80
    • Lemaire, C.1    Versini, J.J.2    Bonhomme, F.3
  • 25
    • 2642704221 scopus 로고    scopus 로고
    • A protein salting-out method applied in genomic DNA isolation from fish whole blood
    • Martínez G., Shaw E.M., Carrillo M., Zanuy S. A protein salting-out method applied in genomic DNA isolation from fish whole blood. Biotechniques 1998, 24:238-239.
    • (1998) Biotechniques , vol.24 , pp. 238-239
    • Martínez, G.1    Shaw, E.M.2    Carrillo, M.3    Zanuy, S.4
  • 26
    • 0032077236 scopus 로고    scopus 로고
    • Statistical confidence for likelihood-based paternity inference in natural populations
    • Marshall T.C., Slate J., Kruuk L., Pemberton J.M. Statistical confidence for likelihood-based paternity inference in natural populations. Molecular Ecology 1998, 7(5):639-665.
    • (1998) Molecular Ecology , vol.7 , Issue.5 , pp. 639-665
    • Marshall, T.C.1    Slate, J.2    Kruuk, L.3    Pemberton, J.M.4
  • 28
    • 0029759465 scopus 로고    scopus 로고
    • High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L.) Skeels] endemic to Morocco
    • Mousadik A., Petit R.J. High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L.) Skeels] endemic to Morocco. Theoret. Appl. Genet. 1996, 92:832-839.
    • (1996) Theoret. Appl. Genet. , vol.92 , pp. 832-839
    • Mousadik, A.1    Petit, R.J.2
  • 29
    • 0032709072 scopus 로고    scopus 로고
    • Genetic study of the Atlantic/Mediterranean transition in sea bass (Dicentrarchus labrax)
    • Naciri N., Lemaire C., Borsa P., Bonhomme F. Genetic study of the Atlantic/Mediterranean transition in sea bass (Dicentrarchus labrax). J. Hered. 2007, 90:591-596.
    • (2007) J. Hered. , vol.90 , pp. 591-596
    • Naciri, N.1    Lemaire, C.2    Borsa, P.3    Bonhomme, F.4
  • 31
    • 0027829336 scopus 로고
    • Mitochondrial DNA sequence variation in the European sea bass, Dicentrarchus labrax L. (Serranidae): evidence of differential haplotype distribution in natural and farmed populations
    • Patarnello T., Bargelloni L., Caldara F., Colombo L. Mitochondrial DNA sequence variation in the European sea bass, Dicentrarchus labrax L. (Serranidae): evidence of differential haplotype distribution in natural and farmed populations. Mol. Mar. Biol. Biotechnol. 1993, 2(6):333-337.
    • (1993) Mol. Mar. Biol. Biotechnol. , vol.2 , Issue.6 , pp. 333-337
    • Patarnello, T.1    Bargelloni, L.2    Caldara, F.3    Colombo, L.4
  • 33
    • 77957339374 scopus 로고    scopus 로고
    • Genomic variation in European seabass: from SNP discovery within ESTs to genome scan. PhD thesis, Katholieke Universiteit Leuven, Leuven, Belgium.
    • Souche, E., 2009. Genomic variation in European seabass: from SNP discovery within ESTs to genome scan. PhD thesis, Katholieke Universiteit Leuven, Leuven, Belgium.
    • (2009)
    • Souche, E.1
  • 35
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir B.S., Cockerham C.C. Estimating F-statistics for the analysis of population structure. Evolution 1984, 38:1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 36
    • 0034035748 scopus 로고    scopus 로고
    • Predicting rates of inbreeding in populations undergoing selection
    • Woolliams J.A., Bijma P. Predicting rates of inbreeding in populations undergoing selection. Genetics 2000, 154:1851-1864.
    • (2000) Genetics , vol.154 , pp. 1851-1864
    • Woolliams, J.A.1    Bijma, P.2
  • 37
    • 0000862605 scopus 로고
    • The interpretation of population structure by F-statistics with special regard to system of mating
    • Wright S. The interpretation of population structure by F-statistics with special regard to system of mating. Evolution 1965, 19:395-420.
    • (1965) Evolution , vol.19 , pp. 395-420
    • Wright, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.