Chapter 17 Antifungal natural products: assays and applications

Advances in Phytomedicine

Volumn 3, Issue C, 2006, Pages 423-467

  Engelmeier, Doris ^a   Hadacek, Franz ^a  

^a NONE

Author keywords

[No Author keywords available]

Indexed keywords

EID: 77957026120     PISSN: 1572557X     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S1572-557X(06)03017-0     Document Type: Review

References (109)

1. Adam K., Sivropoulou A., Kokkini S., Lanaras T., and Arsenakis M. Antifungal activities of Origanum vulgare subsp. hirtum, Mentha spicata, Lavandula angustifolia, and Salvia fructicosa essential oils against human pathogenic fungi. J Agric Food Chem 46 (1998) 1739-1745
2. Agrios G.N. Plant pathology (1997), Academic Press, San Diego
3. 1H nuclear magnetic resonance fingerprinting. J Agric Food Chem, published online doi 10.1021/jf0527798.
4. American Type Culture collection. Preservation methods: freezing and freeze-drying. 2nd edition (1991), American Type Culture Collection, Rockville, MD
5. Anderson I.C., and Cairney J.W.G. Diversity and ecology of soil fungal communities: increased understanding through application of molecular techniques. Environ Microbiol 6 (2004) 769-779
6. Anderson P.K., Cunningham A.A., Patel N.G., Morales F.J., Epstein P.R., and Daszak P. Emerging infectious diseases of plants: pathogen pollution, climate change and agrotechnology drivers. Trends Ecol Evol 19 (2004) 535-544
7. Anonymous. (2004) Straw cereal disease resistance to fungicides. Phytoma 571: 16-18.
8. Baddly J.W., and Moser S.A. Emerging fungal resistance. Clin Lab Med 24 (2004) 721-735
9. Baker B., Zambryski P., Staskawicz B., and Dinesh-Kumer S.P. Interplay of signaling pathways in plant disease resistance. Science 276 (1997) 726-733
10. Bever J.D. Soil community feedback and the coexistence of competitors: conceptual frameworks and empirical tests. New Phytol 157 (2003) 464-473
11. Bills G.F. Isolation and analysis of endophytic fungal communities from woody plants. In: Redlin C., and Carris L.M. (Eds). Endophytic fungi in grasses and woody plants. Systematics, ecology and evolution (1996), American Phytopathological Society, St. Paul, Minnesota 31-66
12. Bridge P., and Spooner B. Soil fungi: diversity and detection. Plant and Soil 232 (2001) 147-154
13. Broekaert W.F., Terras F.R.G., Cammue B.P.A., and Vanderleyden J. An automated quantitative assay for fungal growth inhibition. FEMS Microbiol Lett 69 (1990) 55-60
14. Burdon J.J. The structure and pathogen populations in natural plant communities. Annu Rev Phytopathol 31 (1993) 305-323
15. Calhoun D.L., Roberts G.D., Galgiani J.N., Bennett J.E., Feingold D.S., Jorgensen J., Kobayashi G.S., and Shadomy S. Results of a survey of antifungal susceptibility tests in the United States and interlaboratory comparison of broth dilution testing of flucytosine and amphotericin B. J Clin Microbiol 23 (1986) 298-301
16. Cardwell KF, Desjardins A, Henry SH, Munkvold G, Robens J. (2001) Mycotoxins: the cost of achieving food security and food quality. URL: http://www.apsnet.org/online/feature/mycotoxin/.
17. Chand S., Lusunzi I., Veal D.A., Williams L.R., and Karuso P. Rapid screening of the antimicrobial activity of extracts and natural products. J Antibiot 47 (1994) 1295-1304
18. Chin K.M., Chavaillaz D., Kaesborer M., Staub T., and Felsenstein F.G. Characterizing resistance risk of Erysiphe graminis f.sp tritici. to strobilurins. Crop Protect 20 (2001) 87-96
19. Clancy C.J., and Nguyen M.H. Comparison of a photometric method with standardized methods of antifungal susceptibility testing of yeasts. J Clin Microbiol 35 (1997) 2878-2882
20. Clardy J., and Walsh C. Lesson from natural molecules. Nature 432 (2004) 829-837
21. Cole M.D. Key antifungal, antibacterial, and anti-insect assays - a critical review. Biochem Syst Evol 22 (1994) 837-856
22. Coleman T., Madassery J.V., Kobayashi G.S., Nahm M.H., and Little J.R. New fluorescence assay for the quantization of fungi. J Clin Microbiol 27 (1989) 2003-2007
23. Conrath U., Thulke O., Katz V., Schwindling S., and Kohler A. Priming as a mechanism in induced systemic resistance of plants. Eur J Plant Pathol 107 (2001) 113-119
24. Cormican M.G., and Pfaller M.A. Standardization of antifungal susceptibility testing. J Antimicrob Chemother 38 (1996) 561-578
25. Cos P., Hermans N., De Bruyne T., Apers S., Sindambiwe J.B., Van den Berghe D., Pieters L., and Vlietinck A.J. Further evaluation of Rwandan medicinial plant extracts for their antimicrobial and antiviral activities. J Ethnopharmacol 79 (2002) 155-163
26. Currie C.R., Scott J.A., Summerbell R.C., and Malloch D. Fungus-growing ants use antibiotic-producing bacteria to control garden parasites. Nature 398 (1999) 701-704
27. Daniels H.B.A., and Skipper H.D. Methods for recovery and quantitative estimation of propagules from soil. In: Schenck N.C. (Ed). Methods and principles of mycorrhiza research (1982), American Society for Phytopathology, St. Paul, MN 29-37
28. Deacon J.W. Modern mycology. 3rd edition (1997), Blackwell Science, Oxford
29. Dean R.A. Signal pathways and appressorium morphogenesis. Annu Rev Phytopathol 35 (1997) 211-234
30. De Bolle M.F.C., Goderis I.J., Terras F.R.G., Cammue B.P.A., and Broekaert W.F. A technique for detecting antifungal activity of proteins separated by polyacrylamide gel electrophoresis. Electrophoresis 12 (1991) 442-444
31. Demain AL. (1996). Fungal secondary metabolism. In: Sutton B, editor. A century of mycology. Cambridge: Cambridge University Press, pp. 233-254.
32. Dhingra O.D., and Sinclair J.B. Basic plant pathology methods. 2nd edition (1995), CRC Press, Boca Raton
33. Dixon R.A. Natural products and plant disease resistance. Nature 411 (2001) 843-847
34. Dreyfuss M.M. Neue Erkenntnisse aus einem pharmakologischen Pilz-Screening. Sydowia 39 (1986) 22-36
35. Engelmeier D., Hadacek F., Hofer O., Lutz-Kutschera G., Nagl M., Wurz G., and Greger H. Antifungal 3-butylisocoumarins from Asteraceae-Anthemideae. J Nat Prod 67 (2004) 19-25
36. Espinel-Ingroff A., Bartlett M., Bowden R., Chin N.X., Cooper C., Fothergill A., McGinnis M.R., Menezes P., Messer S.A., Nelson P.W., Odds F.C., Pasarell L., Peter J., Pfaller M.A., Rex J.H., Rinaldi M.G., Shankland G.S., Walsh T.J., and Weitzman I. Multicenter evaluation of proposed standardized procedure for antifungal susceptibility testing of filamentous fungi. J Clin Microbiol 35 (1997) 139-143
37. Espinel-Ingroff A., Kerkering T.M., Goldsom P.R., and Shadomy S. Comparison study of broth macrodilution and microdilution antifungal susceptibility tests. J Clin Microbiol 29 (1991) 1089-1094
38. Espinel-Ingroff A., Montero D., and Martin-Mazuelos E. Long-term preservation of fungal isolates in commercially prepared cryogenic microbank vials. J Clin Microbiol 42 (2004) 1257-1259
39. Feys B.J., and Parker J.E. Interplay of signaling pathways in plant disease resistance. Trends Genet 16 (2000) 449-455
40. Ficker E.F., Arnason J.T., Vindras P.S., Alvarez L.P., Akpagana K., Gbéassor M., De Souza C., and Smith M.L. Inhibition of human pathogenic fungi by ethnobotanically selected plant extracts. Mycoses 46 (2004) 29-37
41. Finney D.J. Probit analysis. 3rd edition (1972), Cambridge University Press, Cambridge, UK
42. Fong Y.K., Annuar S., Lim H.P., Tham F.Y., and Sanderson F.R. A modified filter paper technique for long-term preservation of some fungal cultures. Mycologist 14 (2000) 127-130
43. Freixa B., Vila R., Vargas L., Lozano N., Adzet T., and Cañigueral S. Screening for antifungal activity of nineteen Latin American plants. Phytother Res 12 (1998) 427-430
44. Gams W., and Domsch K.H. Beiträge zur Anwendung der Bodenwaschtechnik für die Isolierung von Bodenpilzen. Arch Mikrobiol 58 (1967) 134-144
45. Gehrt A., Peter J., Pizzo P.A., and Walsh T.J. Effect of increasing inoculum sizes of pathogenic filamentous fungi on MIC's of antifungal agents by broth microdilution method. J Clin Microbiol 33 (1995) 1302-1307
46. Gerlach D. Botanische Mikrotechnik (1977), Thieme, Stuttgart, Germany
47. Guarro J., Llop C., Aguilar C., and Pujol I. Comparison of in vitro antifungal susceptibilities of conidia and hyphae of filamentous fungi. Antimicrob Agents Chemother 41 (1997) 2760-2762
48. Hadacek F. Secondary metabolites as plant traits: current assessment and future perspectives. Crit Rev Plant Sci 21 (2002) 273-322
49. Hadacek F., and Greger H. Testing of antifungal natural products: methodologies, comparability of results and assay choice. Phytochem Anal 11 (2000) 137-147
50. Hadacek F., and Kraus G.F. Plant root carbohydrates affect growth behavior of endophytic microfungi. FEMS Microbiol Ecol 41 (2002) 161-170
51. Hall R.D. Plant metabolomics: from holistic hope, to hype, to hot topic. New Phytol 169 (2006) 453-458
52. Hartmann T. Diversity and variability of plant secondary metabolism: a mechanistic view. Entomol Exp Appl 80 (1996) 177-187
53. Henningsen M. Pilzbekämpfung in der Landwirtschaft, Moderne Fungizide. Chem unserer Zeit 37 (2003) 98-111
54. Hewitt G. New modes of action of fungicides. Pestic Outl 10 (2000) 28-32
55. Hilber U.W., and Schüepp H. Accurate and rapid measurement of lengths of fungal germ tubes by image analysis. Can J Plant Pathol 14 (1992) 185-186
56. Hollomon D.W. Occurrence and molecular characterization of strobilurin resistance in cucumber powdery mildew and downy mildew. Phytopathology 91 (2001) 1166-1171
57. Homans A.L., and Fuchs A. Direct bioautography on thin-layer chromatograms for detecting fungitoxic substances. J Chromatogr 51 (1970) 242-245
58. Hostettmann K., Marston A., Ndjoko K., and Wolfender J.-L. The potential of African plants as source of drugs. Curr Org Chem 4 (2000) 973-1010
59. Huang L., Liu J., Si N., Zhang Z., and Chen L. Studies on Phytophthora capsici resistance to flumorph. Nongyao 43 (2004) 261-262
60. Ishii H., Fraaije B.A., Sugiyama T., Noguchi K., Nishimura K., Takeda T., Amano T., and Hollomon D.W. Occurrence and molecular characterization of strobilurin resistance in powdery mildew and downy mildew. Phytopathology 91 (2001) 1166-1171
61. Jones N.P., Arnason J.T., Abou-Zaid M., Akpagana K., Sanchez-Vindas P., and Smith M.L. Antifungal activity of extracts from medicinial plants used by First Nations People of eastern Canada. J Ethnopharmacol 73 (2000) 191-198
62. Kareiva P. Coevolutionary arms races: is victory possible. Proc Natl Acad Sci USA 96 (1999) 8-10
63. Kast W.K. Some results on the fungicide resitance of Plasmopara viticola and the influence of genotype fitness. Mitt Klosterneuburg 54 (2004) 63-66
64. Kerwin J.L., and Semon M.J. Bioassay methods for fungi and oomycetes. In: Haynes K.F., and Millar J.G. (Eds). Methods in chemical ecology: Bioassay methods Vol. 2 (1999), Kluwer Academic Publishers, Dordrecht, The Netherlands 142-178
65. Knight S.C., Anthony V.M., Brady A.M., Grennland A.J., Heaney S.P., Murray D.C., Powell K.A., Schulz M.A., Spinks C.A., Worthington P.A., and Youle D. Rationale and perspectives on the development of fungicides. Annu Rev Phytopathol 35 (1997) 349-372
66. Knogge W. Fungal infections of plants. Plant Cell 8 (1996) 1711-1722
67. Kobayashi H., Namikoshi M., Yoshimoto T., and Yokochi T. A screening method for antimycotic and antifungal substances using conidia of Pyricularia oryzae, modification and application to tropical marine fungi. J Antibiot 49 (1996) 873-879
68. Kraiczy P., Haase U., Gencic S., Flindt S., Anke T., Brandt U., and von Jagow G. The molecular basis for the natural resistance of the cytochrome bc1 complex from strobilurin-producing basidiomycetes to center Qp inhibitors. Eur J Biochem 235 (1996) 54-63
69. Kreisel H., and Schauer F. Methoden des mykologischen Praktikums (1987), Gustav Fischer, Jena, Germany
70. Labourdette G, Latorse M-P. (2003) Fungicidal compositions containing a plant defense potentiator, a plant defense elicitor, and a fungicide. Eur Pat Appl 2003, EP 1358801.
71. Lam E., Kato N., and Lawton M. Programmed cell death, mitochondria and plant hypersensitive response. Nature 411 (2001) 848-853
72. Large CL. (1940) The advance of the fungi, Jonathan Cape Limited, reprint by American Phytopathological Society, St. Paul, MN, USA, 2003.
73. Lutzoni F., Pagel M., and Reeb V. Major fungal lineages are derived from lichen symbiotic ancestors. Nature 411 (2001) 937-940
74. Lyr H. Modern selective fungicides. 2nd edition (1995), G. Fischer, Jena
75. Morel J.-B., and Dangl J. The hypersensitive response and the induction of cell death in plants. Cell Death Differ 4 (1997) 671-683
76. Nyfeler R., and Keller-Schierlein W. Metabolites of microorganisms. 143. Echinocandin B, a novel polypeptide-antibiotic from Aspergillus nidulans var. echinulatus: isolation and structural components. Helv Chim Acta 57 (1974) 2459-2477
77. Oh K.B., Chen Y.S., Matsuoka H., Yamamoto A., and Kurata H. Morphological recognition of fungal spore germination by a computer-aided image analysis and its application to antifungal activity evaluation. J Biotechnol 45 (1996) 71-79
78. Paxton J.D. Assays for antifungal activity. In: Hostettmann K. (Ed). Methods in plant biochemistry Vol. 6 (1991), Academic Press, London 33-46
79. Pelloux-Prayer A.L., Priem B., and Joseleau J.P. Kinetic evaluation of conidial germination of Botrytis cinerea by a spectofluorometric method. Mycol Res 102 (1998) 320-322
80. Pfaller M.A., Chaturvedi V., Espinel-Ingroff A., Ghannoum M.A., Gosey L.L., Odds F.C., Rex J.H., Rinaldi M.G., Sheehan D.J., Walsh T.J., and Warnock D.W. Reference for broth dilution antifungal susceptibility testing yeasts, approved standard (1997), National Committee for Clinical Laboratory Standards M27-A, Pennsylvania, USA
81. Pfaller M.A., Chaturvedi V., Espinel-Ingroff A., Ghannoum M.A., Gosey L.L., Odds F.C., Rex J.H., Rinaldi M.G., Sheehan D.J., Walsh T.J., and Warnock D.W. Reference method for broth dilution antifungal susceptibility testing of yeasts, approved guideline - second edition (2002), National Committee for Clinical Laboratory Standards M27-A2, Pennsylvania, USA
82. Pfaller MA., Chaturvedi V., Espinel-Ingroff A., Ghannoum M.A., Gosey L.L., Odds F.C., Rex J.H., Rinaldi M.G., Sheehan D.J., Walsh T.J., and Warnock D.W. Reference method for broth dilution antifungal susceptibility testing of filamentous fungi, approved Standard (2002), National Committee for Clinical Laboratory Standards M38-A, Pennsylvania, USA
83. Prell H.H., and Day P.R. Plant-fungal pathogen interactions (2001), Springer, Berlin
84. Rex J.H., Pfaller M.A., Galgiani J.N., Bartlett M.S., Espinel-Ingroff A., Ghannoum M.A., Lancaster M., Odds F.C., Rinaldi M.G., Walsh T.G., and Barry A.L. Development of interpretative breakpoints of antifungal susceptibility testing: conceptual framework and analysis of in vitro-in vivo correlation data for fluconazole, itraconazole, and Candida infections. Clin Infect Dis 24 (1997) 235-247
85. Rex J.H., Pfaller M.A., Rinaldi M.G., Polak A., and Galgiani J.N. Antifungal susceptibility testing. Clin Microbiol Rev 6 (1993) 367-381
86. Rios J.L., Recio M.C., and Villar A. Screening methods for natural products with antimicrobial activity: a review of the literature. J Ethnopharmacol 23 (1988) 747-749
87. Roberts M., and Boyce C.B.C. Principles of biological assay. In: Norris J.R., and Ribbons D.W. (Eds). Methods in microbiology Vol. 7A (1972), Academic Press, New York 153-190
88. Ryan M.J., Jeffires P., Bridge P.D., and Smith D. Developing cryopreservation protocols to secure fungal gene function. CryoLetters 22 (2001) 115-124
89. Santos A.V., Dillon R.J., Dillon V.M., Reynolds S.E., and Samuels R.I. Occurrence of the antibiotic-producing bacterium Burkholderia sp. In colonies of the leaf-cutting ant Atta sexdens rubropilosa. FEMS Microbiol Lett 239 (2004) 319-323
90. Sauter H., Steglich W., and Anke T. Strobilurins: evolution of a new class of active substances. Angew Chem Int Ed 38 (1999) 1328-1349
91. Sheehan D.J., Brown S.D., Pfaller M.A., Warnock D.W., Rex J.H., Chatuvedi V., Espinel-Ingroff A., Ghannoum M.A., Moore L.S., Odds F.C., Rinaldi M.G., and Walsh T.J. Method for antifungal disk diffusion susceptibility testing of yeasts, approved guideline (2004), National Committee for Clinical Laboratory Standards M27-A2, Pennsylvania, USA
92. Sieber T.N. Fungal root endophytes. In: Waisel Y., Eshel A., and Kafkafi U. (Eds). Plant roots. The hidden half (2002), Marcel Dekker, New York 887-917
93. Singleton L.L., Mihail J.D., and Rush C.M. Methods for research of soilborne phytopathogenic fungi (1992), American Phytopathological Society, St Paul, MN
94. Smith D., and Onions A.H.S. The preservation and maintenance of living fungi. IMI Handb 2 (1994) 1-93
95. Stahl E. Dünnschichtchromatographie: ein Laboratoriumshandbuch (Thin layer chromatograpy: a laboratory manual) (1967), Springer, Berlin
96. Stein J.M., and Kirk W.W. Variations in the sensitivity of Phytophthora infestans to the dimethomorph fungicide. Plant Disease 87 (2003) 1283-1289
97. Stetter J., and Lieb F. Innovation im Pflanzenschutz: trends in der Forschung. Angew Chem 112 (2000) 1792-1812
98. Suty A., and Stenzel K. Iprovalicarp. Sensitivity of Phytophthora infestans and Plasmopara viticola. Determination of baseline sensitivity and assessment of the risk of resistance. Pflanzensch.-Nachr. Bayer (German Edition) 52 (1999) 71-84
99. Tallarida R.J. Drug synergism and dose-effect analysis (2000), Chapman & Hall, Boca Raton, FL, USA
100. Terry L.A., and Joyce D.C. Elicitors induce disease resistance in post-harvest horticultural crops: a brief review. Postharvest Biol Technol 32 (2004) 1-13
101. Thines E., Eilbert F., Sterner O., and Anke H. Glisoprenin A, an inhibitor of signal transduction pathway leading to appressorium formation in germinating conidia of Magnaporthe grisea on hydrophobic surfaces. FEMS Microbiol Lett 151 (1997) 219-224
102. Trancassini M., Grezzi M.C., Cipriani P., Mancini C., and Brencialgla M.I. Susceptibility of Candida species strains to five antifungal agents: comparison between agar dilution and disk diffusion tests. Chemioterapia 5 (1986) 14-17
103. Tripathi P., and Dubey N.K. Exploration of natural products as an alternative strategy to control postharvest fungal rotting of fruit and vegetables. Postharvest Biol Technol 32 (2004) 235-245
104. Van der Putten W.H. Plant defense below ground and spatiotemporal processes in natural vegetation. Ecology 84 (2003) 2269-2280
105. Vonshak A., Barazani O., Sathiayamoorthy P., Shalev R., Vardy D., and Golan-Goldhirsh A. Screening south Indian medicinal plants for antifungal activity against cutaneous pathogens. Phytother Res 17 (2003) 1123-1125
106. Wardle D.A. Communities and ecosystems. Linking the aboveground and belowground components (2002), Princetown University Press, Princetown and Oxford
107. Wedge D.E., and Kuhajek J.M. A microbioassay for fungicide discovery. SAAS Bull Biochem Biotech 11 (1998) 1-7
108. Wedge D.E., and Nagle D.G. A new 2D-TLC bioautography mehod for the discovery of novel antifungal agents to control plant pathogens. J Nat Prod 63 (2000) 1050-1054
109. Yang X.B., and del Rio L. Implementation of biological control of plant diseases in integrated pest management systems. In: Gnanamanickam S.S. (Ed). Biological control of crop diseases (2002), Marcel Dekker, New York 339-354