-
1
-
-
0038076031
-
Metabolomics: Small-molecule 'omics'
-
Adams A 2003 Metabolomics: Small-molecule 'omics' Scientist 21 April 38 40
-
(2003)
Scientist
, vol.21
, pp. 38-40
-
-
Adams, A.1
-
5
-
-
4444309760
-
Potential of metabolomics as a functional genomics tool
-
Bino RJ Hall RD Fiehn O Kopka J Saito K Draper J Nikolau BJ Mendes P Roessner-Tunali U Beale MH Trethewey RN Lange BM Wurtele ES Sumner LW 2004 Potential of metabolomics as a functional genomics tool Trends in Plant Science 9 418 425
-
(2004)
Trends in Plant Science
, vol.9
, pp. 418-425
-
-
Bino, R.J.1
Hall, R.D.2
Fiehn, O.3
Kopka, J.4
Saito, K.5
Draper, J.6
Nikolau, B.J.7
Mendes, P.8
Roessner-Tunali, U.9
Beale, M.H.10
Trethewey, R.N.11
Lange, B.M.12
Wurtele, E.S.13
Sumner, L.W.14
-
6
-
-
20244383169
-
dg mutation of tomato: Alterations in the fruit metabolome
-
dg mutation of tomato: alterations in the fruit metabolome New Phytologist 166 427 438
-
(2005)
New Phytologist
, vol.166
, pp. 427-438
-
-
Bino, R.J.1
De Vos, C.H.R.2
Lieberman, M.3
Hall, R.D.4
Bovy, A.G.5
Jonker, H.H.6
Tikunov, Y.7
Lommen, A.8
Moco, S.9
Levin, I.10
-
7
-
-
11344249260
-
Metabolome analysis: The potential of in vivo labeling with stable isotopes for metabolite profiling
-
Birkenmeyer C Luedemann A Wagner C Erban A Kopka J 2005 Metabolome analysis: the potential of in vivo labeling with stable isotopes for metabolite profiling Trends in Biotechnology 23 28 33
-
(2005)
Trends in Biotechnology
, vol.23
, pp. 28-33
-
-
Birkenmeyer, C.1
Luedemann, A.2
Wagner, C.3
Erban, A.4
Kopka, J.5
-
8
-
-
13244292589
-
Metabolic profiling of Medicago trunculata cell cultures reveals the effects of biotic and abiotic elicitors on metabolism
-
Broeckling CD Huhman DV Farag MA Smith JT May GD Mendes P Dixon RA Sumner LW 2005 Metabolic profiling of Medicago trunculata cell cultures reveals the effects of biotic and abiotic elicitors on metabolism Journal of Experimental Botany 56 323 326
-
(2005)
Journal of Experimental Botany
, vol.56
, pp. 323-326
-
-
Broeckling, C.D.1
Huhman, D.V.2
Farag, M.A.3
Smith, J.T.4
May, G.D.5
Mendes, P.6
Dixon, R.A.7
Sumner, L.W.8
-
10
-
-
26444548613
-
Hierarchical metabolomics demonstrates compositional similarity between genetically modified and conventional potato crops
-
Catchpole GS Beckman M Enot DP Mondhe M Zywicki B Taylor J Hardy N Smith A King RD Kell DB Fiehn O Draper J 2005 Hierarchical metabolomics demonstrates compositional similarity between genetically modified and conventional potato crops Proceedings of the National Academy of Sciences, USA 102 14458 14462
-
(2005)
Proceedings of the National Academy of Sciences, USA
, vol.102
, pp. 14458-14462
-
-
Catchpole, G.S.1
Beckman, M.2
Enot, D.P.3
Mondhe, M.4
Zywicki, B.5
Taylor, J.6
Hardy, N.7
Smith, A.8
King, R.D.9
Kell, D.B.10
Fiehn, O.11
Draper, J.12
-
11
-
-
24944458070
-
Fruit-specific RNAi-mediated suppression of DET1 enhances carotenoid and flavonoid content in tomatoes
-
Davuluri GR van Tuinen A Fraser PD Manfredonia A Newman R Burgess D Brummell DA King SR Palys J Uhlig J Bramley PM Pennings HMJ Bowler C 2005 Fruit-specific RNAi-mediated suppression of DET1 enhances carotenoid and flavonoid content in tomatoes Nature Biotechnology 23 890 895
-
(2005)
Nature Biotechnology
, vol.23
, pp. 890-895
-
-
Davuluri, G.R.1
Van Tuinen, A.2
Fraser, P.D.3
Manfredonia, A.4
Newman, R.5
Burgess, D.6
Brummell, D.A.7
King, S.R.8
Palys, J.9
Uhlig, J.10
Bramley, P.M.11
Pennings, H.M.J.12
Bowler, C.13
-
14
-
-
20444439241
-
Lotus japonicus metabolic profiling: Development of gas chromatography-mass spectrometry resources for the study of plant-microbe interactions
-
Desbrosses GG Kopka J Udvardi MK 2005 Lotus japonicus metabolic profiling: development of gas chromatography-mass spectrometry resources for the study of plant-microbe interactions Plant Physiology 137 1302 1318
-
(2005)
Plant Physiology
, vol.137
, pp. 1302-1318
-
-
Desbrosses, G.G.1
Kopka, J.2
Udvardi, M.K.3
-
15
-
-
24944481590
-
A two-for-one in tomato nutritional enhancement
-
Dixon RA 2005 A two-for-one in tomato nutritional enhancement Nature Biotechnology 23 825 826
-
(2005)
Nature Biotechnology
, vol.23
, pp. 825-826
-
-
Dixon, R.A.1
-
16
-
-
16244402990
-
Metabolomics: Current analytical platforms and methodologies
-
Dunn WB Ellis DI 2005 Metabolomics: current analytical platforms and methodologies Trends in Analytical Chemistry 24 285 294
-
(2005)
Trends in Analytical Chemistry
, vol.24
, pp. 285-294
-
-
Dunn, W.B.1
Ellis, D.I.2
-
17
-
-
0142033903
-
Metabolomics spectral formatting, alignment and conversion tools (MSFACTs)
-
Duran AL Yang J Wang L Sumner LW 2003 Metabolomics spectral formatting, alignment and conversion tools (MSFACTs) Bioinformatics 19 2282 2293
-
(2003)
Bioinformatics
, vol.19
, pp. 2282-2293
-
-
Duran, A.L.1
Yang, J.2
Wang, L.3
Sumner, L.W.4
-
21
-
-
18044387854
-
Metabolomics, genomics proteomics and the identification of enzymes and their substrates and products
-
Fridman E Pichersky E 2005 Metabolomics, genomics proteomics and the identification of enzymes and their substrates and products Current Opinion in Plant Biology 8 242 248
-
(2005)
Current Opinion in Plant Biology
, vol.8
, pp. 242-248
-
-
Fridman, E.1
Pichersky, E.2
-
22
-
-
14744280370
-
A robot-based platform to measure multiple enzyme activities in Arabidopsis using a set of cycling assays: Comparison of changes in enzyme activities and transcript levels during diurnal cycles and in prolonged darkness
-
Gibon Y Blaesing OE Hannemann J Carillo P Höhne M Hendriks JHM Palacios N Cross J Selbig J Stitt M 2004 A robot-based platform to measure multiple enzyme activities in Arabidopsis using a set of cycling assays: comparison of changes in enzyme activities and transcript levels during diurnal cycles and in prolonged darkness Plant Cell 16 3304 3325
-
(2004)
Plant Cell
, vol.16
, pp. 3304-3325
-
-
Gibon, Y.1
Blaesing, O.E.2
Hannemann, J.3
Carillo, P.4
Höhne, M.5
Hendriks, J.H.M.6
Palacios, N.7
Cross, J.8
Selbig, J.9
Stitt, M.10
-
24
-
-
13244279624
-
Making sense of the metabolome using evolutionary computation: Seeing the wood with the trees
-
Goodacre R 2005 Making sense of the metabolome using evolutionary computation: seeing the wood with the trees Journal of Experimental Botany 56 245 254
-
(2005)
Journal of Experimental Botany
, vol.56
, pp. 245-254
-
-
Goodacre, R.1
-
25
-
-
0037370292
-
Chemometric discrimination of unfractionated plant extracts analysed by electrospray mass spectrometry
-
Goodacre R York EV Heald JK Scott IM 2003 Chemometric discrimination of unfractionated plant extracts analysed by electrospray mass spectrometry Phytochemistry 62 859 863
-
(2003)
Phytochemistry
, vol.62
, pp. 859-863
-
-
Goodacre, R.1
York, E.V.2
Heald, J.K.3
Scott, I.M.4
-
28
-
-
17644372743
-
What it takes to get a herbicide's mode of action: Physionomics, a classical approach in a new complexion
-
Grossmann K 2005 What it takes to get a herbicide's mode of action: Physionomics, a classical approach in a new complexion Pest Management Science 61 423 431
-
(2005)
Pest Management Science
, vol.61
, pp. 423-431
-
-
Grossmann, K.1
-
29
-
-
3242741850
-
Design of experiments: An efficiency strategy to identify factors influencing extraction and derivitisation of Arabidopsis thaliana samples in metabolomics studies with gas chromatography/mass spectrometry
-
Gullberg J Jonsson P Nordström A Sjöström M Moritz T 2004 Design of experiments: an efficiency strategy to identify factors influencing extraction and derivitisation of Arabidopsis thaliana samples in metabolomics studies with gas chromatography/mass spectrometry Analytical Biochemistry 331 283 295
-
(2004)
Analytical Biochemistry
, vol.331
, pp. 283-295
-
-
Gullberg, J.1
Jonsson, P.2
Nordström, A.3
Sjöström, M.4
Moritz, T.5
-
30
-
-
84900099919
-
Metabolomics for the assessment of functional diversity and quality traits in plants
-
In*Vaidyanathan S.*Harrigan G.G.*Goodacre R. Springer New York, NY, USA eds
-
Hall RD Vos CHR Verhoeven HA Bino RJ 2005 Metabolomics for the assessment of functional diversity and quality traits in plants In Vaidyanathan S Harrigan GG Goodacre R eds Metabolome analyses: strategies for systems biology New York, NY, USA Springer
-
(2005)
Metabolome Analyses: Strategies for Systems Biology
-
-
Hall, R.D.1
Vos, C.H.R.2
Verhoeven, H.A.3
Bino, R.J.4
-
31
-
-
33645092845
-
Metabolic profiling: Its role in biomarker discovery and gene function analysis
-
Acad. Publishers Boston eds.
-
Harrigan GG Goodacre R eds. 2003 Metabolic profiling: Its role in biomarker discovery and gene function analysis Kluwer Acad. Publishers Boston
-
(2003)
Kluwer
-
-
Harrigan, G.G.1
Goodacre, R.2
-
33
-
-
3042750616
-
Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana
-
Hirai MY Yano M Goodenowe DB Kanaya S Kimura T Awazuhara M Arita M Fujiwara T Saito K 2004 Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana PNAS 101 10205 10201
-
(2004)
PNAS
, vol.101
, pp. 10205-10201
-
-
Hirai, M.Y.1
Yano, M.2
Goodenowe, D.B.3
Kanaya, S.4
Kimura, T.5
Awazuhara, M.6
Arita, M.7
Fujiwara, T.8
Saito, K.9
-
34
-
-
21844472259
-
Elucidation of Gene-to-gene networks in Arabidopsis by integration of metabolomics and transcriptomics
-
Hirai MY Klein M Fujikawa Y Yano M Goodenowe DB Yamazaki Y Kanaya S Nakamura Y Kitayama M Suzuki H Sakurai N Shibata D Tokuhisa J Reichelt M Gershenzon J Papenbrock J Saito K 2005 Elucidation of Gene-to-gene networks in Arabidopsis by integration of metabolomics and transcriptomics Journal of Biological Chemistry 280 25590 25595
-
(2005)
Journal of Biological Chemistry
, vol.280
, pp. 25590-25595
-
-
Hirai, M.Y.1
Klein, M.2
Fujikawa, Y.3
Yano, M.4
Goodenowe, D.B.5
Yamazaki, Y.6
Kanaya, S.7
Nakamura, Y.8
Kitayama, M.9
Suzuki, H.10
Sakurai, N.11
Shibata, D.12
Tokuhisa, J.13
Reichelt, M.14
Gershenzon, J.15
Papenbrock, J.16
Saito, K.17
-
35
-
-
7444253428
-
Systems biology and new technologies enable predictive and preventative medicine
-
Hood L Heath JR Phelps ME Lin B 2004 Systems biology and new technologies enable predictive and preventative medicine Science 306 640 643
-
(2004)
Science
, vol.306
, pp. 640-643
-
-
Hood, L.1
Heath, J.R.2
Phelps, M.E.3
Lin, B.4
-
37
-
-
3843130613
-
Application of a high-throughput HPLC-MS/MS assay to Arabidopsis mutant screening; Evidence that threonine aldolase plays a role in seed nutritional quality
-
Jander G Norris SR Joshi V Fraga M Rugg AYuS Li L Last RL 2004 Application of a high-throughput HPLC-MS/MS assay to Arabidopsis mutant screening; evidence that threonine aldolase plays a role in seed nutritional quality Plant Journal 39 465 475
-
(2004)
Plant Journal
, vol.39
, pp. 465-475
-
-
Jander, G.1
Norris, S.R.2
Joshi, V.3
Fraga, M.4
Ayus, R.5
Li, L.6
Last, R.L.7
-
38
-
-
19944398727
-
A proposed framework for the description of plant metabolomics experiments and their results
-
Jenkins H Hardy N Beckmann M Draper J Smith AR Taylor J Fiehn O Goodacre R Bino RJ Hall RD Kopka J Lane GA Lange BM Liu JR Mendes P Nikolau BJ Oliver SG Paton NW Rhee S Roessner-Tunali U Saito K Smedsgaard J Sumner LW Wang T Walsh S Wurtle ES Kell DB 2004 A proposed framework for the description of plant metabolomics experiments and their results Nature Biotechnology 22 1601 1606
-
(2004)
Nature Biotechnology
, vol.22
, pp. 1601-1606
-
-
Jenkins, H.1
Hardy, N.2
Beckmann, M.3
Draper, J.4
Smith, A.R.5
Taylor, J.6
Fiehn, O.7
Goodacre, R.8
Bino, R.J.9
Hall, R.D.10
Kopka, J.11
Lane, G.A.12
Lange, B.M.13
Liu, J.R.14
Mendes, P.15
Nikolau, B.J.16
Oliver, S.G.17
Paton, N.W.18
Rhee, S.19
Roessner-Tunali, U.20
Saito, K.21
Smedsgaard, J.22
Sumner, L.W.23
Wang, T.24
Walsh, S.25
Wurtle, E.S.26
Kell, D.B.27
more..
-
43
-
-
25444526868
-
Processing methods for differential analysis of LC/MS profile data
-
Katajamaa M Oresic M 2005 Processing methods for differential analysis of LC/MS profile data BMC Bioinformatics 6 179 192
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 179-192
-
-
Katajamaa, M.1
Oresic, M.2
-
44
-
-
0036842183
-
Genotype: Phenotype mapping: Genes as computer programs
-
Kell DB 2002 Genotype: phenotype mapping: genes as computer programs Trends in Genetics 18 555 559
-
(2002)
Trends in Genetics
, vol.18
, pp. 555-559
-
-
Kell, D.B.1
-
45
-
-
2942676743
-
Metabolomics and systems biology: Making sense of the soup
-
Kell DB 2004 Metabolomics and systems biology: making sense of the soup Current Opinion in Microbiology 7 296 307
-
(2004)
Current Opinion in Microbiology
, vol.7
, pp. 296-307
-
-
Kell, D.B.1
-
46
-
-
4644255326
-
Stable isotope labeling of Arabidopsis thaliana for an NMR-based metabolomics approach
-
Kikuchi J Shinozaki K Hirayama T 2004 Stable isotope labeling of Arabidopsis thaliana for an NMR-based metabolomics approach Plant and Cell Physiology 45 1099 1104
-
(2004)
Plant and Cell Physiology
, vol.45
, pp. 1099-1104
-
-
Kikuchi, J.1
Shinozaki, K.2
Hirayama, T.3
-
47
-
-
20244380782
-
: The Golm Metabolome database
-
Kopka J Schauer N Krueger S Birkenmeyer C Usadel B Bergmüller E Dörmann P Gibon Y Willmitzer L Fernie AR Steinhauser D 2005 : The Golm Metabolome database Bioinformatics 21 1635 1638
-
(2005)
Bioinformatics
, vol.21
, pp. 1635-1638
-
-
Kopka, J.1
Schauer, N.2
Krueger, S.3
Birkenmeyer, C.4
Usadel, B.5
Bergmüller, E.6
Dörmann, P.7
Gibon, Y.8
Willmitzer, L.9
Fernie, A.R.10
Steinhauser, D.11
-
48
-
-
13444249488
-
Metabolic engineering of dhurrin in transgenic Arabidopsis plants with marginal inadvertent effects on the metabolome and transcriptome
-
Kristensen C Morant M Olsen CE Ekstrom CT Galbraith DW Moller BL Bak S 2005 Metabolic engineering of dhurrin in transgenic Arabidopsis plants with marginal inadvertent effects on the metabolome and transcriptome Proceedings of the National Academy of Sciences, USA 102 1779 1784
-
(2005)
Proceedings of the National Academy of Sciences, USA
, vol.102
, pp. 1779-1784
-
-
Kristensen, C.1
Morant, M.2
Olsen, C.E.3
Ekstrom, C.T.4
Galbraith, D.W.5
Moller, B.L.6
Bak, S.7
-
49
-
-
10744223858
-
Genomic scale profiling of nutrient and trace elements in Arabidopsis thaliana
-
Lahner B Gong J Mahmoudian M Smith EL Abid KB Rogers EE Guerinot ML Harper JF Ward JM McIntyre L Schroeder JI Salt DE 2003 Genomic scale profiling of nutrient and trace elements in Arabidopsis thaliana Nature Biotechnology 21 1215 1221
-
(2003)
Nature Biotechnology
, vol.21
, pp. 1215-1221
-
-
Lahner, B.1
Gong, J.2
Mahmoudian, M.3
Smith, E.L.4
Abid, K.B.5
Rogers, E.E.6
Guerinot, M.L.7
Harper, J.F.8
Ward, J.M.9
McIntyre, L.10
Schroeder, J.I.11
Salt, D.E.12
-
50
-
-
13444312027
-
Comprehensive post-genomic data analysis approaches integrating biochemical pathway maps
-
Lange BM Ghassemian M 2005 Comprehensive post-genomic data analysis approaches integrating biochemical pathway maps Phytochemistry 66 413 451
-
(2005)
Phytochemistry
, vol.66
, pp. 413-451
-
-
Lange, B.M.1
Ghassemian, M.2
-
51
-
-
2442719174
-
Metabonomics technologies and their applications in physiological monitoring, drug safety assessment and disease diagnosis
-
Lindon JC Holmes E Bollard ME Stanley EG Nicholson JK 2004 Metabonomics technologies and their applications in physiological monitoring, drug safety assessment and disease diagnosis Biomarkers 9 1 31
-
(2004)
Biomarkers
, vol.9
, pp. 1-31
-
-
Lindon, J.C.1
Holmes, E.2
Bollard, M.E.3
Stanley, E.G.4
Nicholson, J.K.5
-
52
-
-
24944444149
-
Summary recommendations for standardization and reporting of metabolic analyses
-
Lindon JC Nicholson JK Homes E Keun HC Craig A Pearce JTM Bruce SJ Hardy N Sansone S-A Antti H Jonsson P Daykin C Navarange M Berger RD Verheij ER Amberg A Baunsgaard D Cantor GH Lehman-McKeeman L Earll M Wold S Johansson E Haselden JN Kramer K Thomas C Lindberg J Schuppe-Koistinen I Wilson ID Reily MD Robertson DG Senn H Krotsky A Kochhar S Powell J van der Ouderaa F Plumb R Schaefer H Spraul M 2005 Summary recommendations for standardization and reporting of metabolic analyses Nature Biotechnology 23 833 838
-
(2005)
Nature Biotechnology
, vol.23
, pp. 833-838
-
-
Lindon, J.C.1
Nicholson, J.K.2
Homes, E.3
Keun, H.C.4
Craig, A.5
Pearce, J.T.M.6
Bruce, S.J.7
Hardy, N.8
Sansone, S.-A.9
Antti, H.10
Jonsson, P.11
Daykin, C.12
Navarange, M.13
Berger, R.D.14
Verheij, E.R.15
Amberg, A.16
Baunsgaard, D.17
Cantor, G.H.18
Lehman-Mckeeman, L.19
Earll, M.20
Wold, S.21
Johansson, E.22
Haselden, J.N.23
Kramer, K.24
Thomas, C.25
Lindberg, J.26
Schuppe-Koistinen, I.27
Wilson, I.D.28
Reily, M.D.29
Robertson, D.G.30
Senn, H.31
Krotsky, A.32
Kochhar, S.33
Powell, J.34
Van Der Ouderaa, F.35
Plumb, R.36
Schaefer, H.37
Spraul, M.38
more..
-
54
-
-
21444454249
-
Tailoring the plant metabolome without a loose stitch
-
Memelink J 2004 Tailoring the plant metabolome without a loose stitch Trends in Plant Science 7 305 307
-
(2004)
Trends in Plant Science
, vol.7
, pp. 305-307
-
-
Memelink, J.1
-
55
-
-
4444297148
-
Combined transcript and metabolite analysis reveals genes involved in spider mite induced volatile formation in cucumber plants
-
Merke P Kappers IF Verstappen FWA Vorst O Dicke M Bouwmeester HJ 2004 Combined transcript and metabolite analysis reveals genes involved in spider mite induced volatile formation in cucumber plants Plant Physiology 135 2012 2024
-
(2004)
Plant Physiology
, vol.135
, pp. 2012-2024
-
-
Merke, P.1
Kappers, I.F.2
Verstappen, F.W.A.3
Vorst, O.4
Dicke, M.5
Bouwmeester, H.J.6
-
56
-
-
0038460047
-
AraCyc: A biochemical pathway database for Arabidopsis
-
Mueller LA Zhang P Rhee SY 2003 AraCyc: a biochemical pathway database for Arabidopsis Plant Physiology 132 453 460
-
(2003)
Plant Physiology
, vol.132
, pp. 453-460
-
-
Mueller, L.A.1
Zhang, P.2
Rhee, S.Y.3
-
57
-
-
11144226519
-
A metabolomic analysis of medicinal diversity in Huang-qin (Scutellaria baicalensis) genotypes: Discovery of novel compounds
-
Murch SJ Rupasinghe HPV Goodenowe DB Saxena PK 2004 A metabolomic analysis of medicinal diversity in Huang-qin (Scutellaria baicalensis) genotypes: discovery of novel compounds Plant Cell Reports 23 419 425
-
(2004)
Plant Cell Reports
, vol.23
, pp. 419-425
-
-
Murch, S.J.1
Rupasinghe, H.P.V.2
Goodenowe, D.B.3
Saxena, P.K.4
-
60
-
-
19044378856
-
Enhnaced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants
-
Nunes-Nesi A Carrari F Lytovchenco A Smith AMO Loureiro ME Ratcliffe RG Sweetlove LJ Fernie AR 2005 Enhnaced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants Plant Physiology 137 611 622
-
(2005)
Plant Physiology
, vol.137
, pp. 611-622
-
-
Nunes-Nesi, A.1
Carrari, F.2
Lytovchenco, A.3
Smith, A.M.O.4
Loureiro, M.E.5
Ratcliffe, R.G.6
Sweetlove, L.J.7
Fernie, A.R.8
-
61
-
-
4444351323
-
Plant cell factories in the post-genomic era: New ways to produce designer secondary metabolites
-
Oksman-Caldentey K-M Inzé D 2004 Plant cell factories in the post-genomic era: new ways to produce designer secondary metabolites Trends in Plant Science 9 433 440
-
(2004)
Trends in Plant Science
, vol.9
, pp. 433-440
-
-
Oksman-Caldentey, K.-M.1
Inzé, D.2
-
63
-
-
13244259596
-
Application of metabolite profiling to the identification of traits in a population of tomato introgression lines
-
Overy SA Walker HJ Malone S Howard TP Baxter CJ Sweetlove LJ Hill SA Quick WP 2005 Application of metabolite profiling to the identification of traits in a population of tomato introgression lines Journal of Experimental Botany 56 287 296
-
(2005)
Journal of Experimental Botany
, vol.56
, pp. 287-296
-
-
Overy, S.A.1
Walker, H.J.2
Malone, S.3
Howard, T.P.4
Baxter, C.J.5
Sweetlove, L.J.6
Hill, S.A.7
Quick, W.P.8
-
64
-
-
22244458870
-
Dihydrocaffeoyl polyamines (kukoamine and allies) in potato (Solanum tuberosum) tubers detected during metabolite profiling
-
Parr AJ Mellon FA Coloquhoun IJ Davies HV 2005 Dihydrocaffeoyl polyamines (kukoamine and allies) in potato (Solanum tuberosum) tubers detected during metabolite profiling Journal of Agricultural and Food Chemistry 53 5461 5466
-
(2005)
Journal of Agricultural and Food Chemistry
, vol.53
, pp. 5461-5466
-
-
Parr, A.J.1
Mellon, F.A.2
Coloquhoun, I.J.3
Davies, H.V.4
-
65
-
-
13244254993
-
Revealing metabolic phenotypes in plants: Inputs from NMR analysis
-
Ratcliffe RG Shachar-Hill Y 2005 Revealing metabolic phenotypes in plants: inputs from NMR analysis Biology Review of 80 27 43
-
(2005)
Biology Review of
, vol.80
, pp. 27-43
-
-
Ratcliffe, R.G.1
Shachar-Hill, Y.2
-
67
-
-
1342308553
-
Profiling of Arabidopsis secondary metabolites by capillary liquid chromatography coupled to electrospray ionization quadrupole time-of-flight mass spectrometry
-
von Roepenack-Lahaye E Degenkolb T Zerjeski M Franz M Roth U Wessjohann L Schmidt J Scheel D Clemens S 2004 Profiling of Arabidopsis secondary metabolites by capillary liquid chromatography coupled to electrospray ionization quadrupole time-of-flight mass spectrometry Plant Physiology 134 548 559
-
(2004)
Plant Physiology
, vol.134
, pp. 548-559
-
-
Von Roepenack-Lahaye, E.1
Degenkolb, T.2
Zerjeski, M.3
Franz, M.4
Roth, U.5
Wessjohann, L.6
Schmidt, J.7
Scheel, D.8
Clemens, S.9
-
69
-
-
5144227035
-
Simultaneous determination of the main metabolites in rice leaves using capillary electrophoresis mass spectrometry and capillary electrophoresis diode array detection
-
Sato S Soga T Nishioka T Tomita M 2004 Simultaneous determination of the main metabolites in rice leaves using capillary electrophoresis mass spectrometry and capillary electrophoresis diode array detection Plant Journal 40 151 163
-
(2004)
Plant Journal
, vol.40
, pp. 151-163
-
-
Sato, S.1
Soga, T.2
Nishioka, T.3
Tomita, M.4
-
70
-
-
20044368617
-
GC-MS libraries for the rapid identification of metabolites in complex biological samples
-
Schauer N Steinhauser D Strelkov S Schomburg D Allison G Moritz T Lundgren K Roessner-Tunali U Forbes MG Willmitzer L Fernie AR Kopka J 2005a GC-MS libraries for the rapid identification of metabolites in complex biological samples FEBS Letters 579 1322 1327
-
(2005)
FEBS Letters
, vol.579
, pp. 1322-1327
-
-
Schauer, N.1
Steinhauser, D.2
Strelkov, S.3
Schomburg, D.4
Allison, G.5
Moritz, T.6
Lundgren, K.7
Roessner-Tunali, U.8
Forbes, M.G.9
Willmitzer, L.10
Fernie, A.R.11
Kopka, J.12
-
71
-
-
13244297050
-
Metabolic profiling of leaves and fruit of a wild species tomato: A survey of the Solanum lycopersicum complex
-
Schauer N Zamir D Fernie AR 2005b Metabolic profiling of leaves and fruit of a wild species tomato: a survey of the Solanum lycopersicum complex Journal of Experimental Botany 56 298 307
-
(2005)
Journal of Experimental Botany
, vol.56
, pp. 298-307
-
-
Schauer, N.1
Zamir, D.2
Fernie, A.R.3
-
73
-
-
13244262861
-
Metabolite profiling of fungi and yeast: From phenotype to metabolome by MS and informatics
-
Smedsgaard J Nielsen J 2005 Metabolite profiling of fungi and yeast: from phenotype to metabolome by MS and informatics Journal of Experimental Botany 56 273 286
-
(2005)
Journal of Experimental Botany
, vol.56
, pp. 273-286
-
-
Smedsgaard, J.1
Nielsen, J.2
-
75
-
-
0038742865
-
From measurements of metabolites to metabolomics: An 'on the fly' perspective illustrated by recent studies of carbon-nitrogen interactions
-
Stitt M Fernie AR 2003 From measurements of metabolites to metabolomics: an 'on the fly' perspective illustrated by recent studies of carbon-nitrogen interactions Current Opinion in Plant Biology 14 136 144
-
(2003)
Current Opinion in Plant Biology
, vol.14
, pp. 136-144
-
-
Stitt, M.1
Fernie, A.R.2
-
76
-
-
0345270397
-
Plant metabolomics: Large-scale phytochemistry in the functional genomics era
-
Sumner LW Mendes P Dixon RA 2003 Plant metabolomics: large-scale phytochemistry in the functional genomics era Phytochemistry 62 817 836
-
(2003)
Phytochemistry
, vol.62
, pp. 817-836
-
-
Sumner, L.W.1
Mendes, P.2
Dixon, R.A.3
-
77
-
-
12144291195
-
MAPMAN: A user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes
-
Thimm O Bläsing O Gibon Y Nagel A Meyer S Krüger P Selbig J Müller LA Rhee SY Stitt M 2004 MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes Plant Journal 37 914 939
-
(2004)
Plant Journal
, vol.37
, pp. 914-939
-
-
Thimm, O.1
Bläsing, O.2
Gibon, Y.3
Nagel, A.4
Meyer, S.5
Krüger, P.6
Selbig, J.7
Müller, L.A.8
Rhee, S.Y.9
Stitt, M.10
-
79
-
-
33645079578
-
Metabolic profiling of natural volatiles: Head space trapping GC/MS
-
In*Weckwerth W. ed. Methods in Molecular Biology Series
-
Tikunov Y Verstappen F Hall RD 2006b Metabolic profiling of natural volatiles: head space trapping GC/MS In Weckwerth W ed Plant metabolomics: methods and protocols Methods in Molecular Biology Series New York, NY, USA Humana Press. In press )
-
(2006)
Plant Metabolomics: Methods and Protocols
-
-
Tikunov, Y.1
Verstappen, F.2
Hall, R.D.3
-
80
-
-
17044369876
-
Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor
-
Tohge T Nishiyama Y Hirai MY Yano M Nakajima J-I Awazuhara M Inoue E Takahashi H Goodenowe DB Kitayama M Noji M Yamazaki M Saito K 2005 Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor Plant Journal 42 218 235
-
(2005)
Plant Journal
, vol.42
, pp. 218-235
-
-
Tohge, T.1
Nishiyama, Y.2
Hirai, M.Y.3
Yano, M.4
Nakajima, J.-I.5
Awazuhara, M.6
Inoue, E.7
Takahashi, H.8
Goodenowe, D.B.9
Kitayama, M.10
Noji, M.11
Yamazaki, M.12
Saito, K.13
-
81
-
-
1542351248
-
Metabolite profiling as an aid to metabolic engineering in plants
-
Trethewey RN 2004 Metabolite profiling as an aid to metabolic engineering in plants Current Opinion in Plant Biology 7 196 201
-
(2004)
Current Opinion in Plant Biology
, vol.7
, pp. 196-201
-
-
Trethewey, R.N.1
-
82
-
-
27244453164
-
Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses
-
Usadel B Nagel A Thimm O Redestig H Blaesing OE Palacios-Rojos N Selbig J Hannemann J Con ceicao Piques M Steinhauser D Scheible W-R Gibon Y Morcuende R Weicht D Meyer S Stitt M 2005 Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses Plant Physiology 138 1195 1204
-
(2005)
Plant Physiology
, vol.138
, pp. 1195-1204
-
-
Usadel, B.1
Nagel, A.2
Thimm, O.3
Redestig, H.4
Blaesing, O.E.5
Palacios-Rojos, N.6
Selbig, J.7
Hannemann, J.8
Con Ceicao Piques, M.9
Steinhauser, D.10
Scheible, W.-R.11
Gibon, Y.12
Morcuende, R.13
Weicht, D.14
Meyer, S.15
Stitt, M.16
-
84
-
-
84948955657
-
Plant metabolomics strategies based upon Quadruple Time of Flight Mass Spectrometry (QTOF-MS)
-
In*Saito K.*Dixon R.*Willmitzer L. eds
-
Verhoeven HA de Vos CHR Bino RJ Hall RD 2006 Plant metabolomics strategies based upon Quadruple Time of Flight Mass Spectrometry (QTOF-MS) In Saito K Dixon R Willmitzer L eds Plant Metabolomics
-
(2006)
Plant Metabolomics
-
-
Verhoeven, H.A.1
De Vos, C.H.R.2
Bino, R.J.3
Hall, R.D.4
-
86
-
-
20444478277
-
Metabolomics in the context of systems biology: Bridging traditional Chinese medicine and molecular pharmacology
-
Wang M Lamers RJAN Korthout HAAJ van Nesselrooij JHJ Witkamp RF van der Heijden R Voshol PJ Havekes LM Verpoorte R van der Greef J 2005 Metabolomics in the context of systems biology: bridging traditional Chinese medicine and molecular pharmacology Phytotherapy Research 19 173 182
-
(2005)
Phytotherapy Research
, vol.19
, pp. 173-182
-
-
Wang, M.1
Rjan, L.2
Haaj, K.3
Van Nesselrooij, J.H.J.4
Witkamp, R.F.5
Van Der Heijden, R.6
Voshol, P.J.7
Havekes, L.M.8
Verpoorte, R.9
Van Der Greef, J.10
-
88
-
-
6044226889
-
Differential mass spectrometry: A label-free LC-MS method for finding significant differences in complex peptide and protein mixtures
-
Wiener MC Sachs JR Deyanova EG Yates NA 2004 Differential mass spectrometry: a label-free LC-MS method for finding significant differences in complex peptide and protein mixtures Analytical Chemistry 76 6085 6096
-
(2004)
Analytical Chemistry
, vol.76
, pp. 6085-6096
-
-
Wiener, M.C.1
Sachs, J.R.2
Deyanova, E.G.3
Yates, N.A.4
-
89
-
-
18744372755
-
SpecAlign - Processing and alignment of mass spectra datasets
-
Wong JWH Cagney G Cartwright HM 2005 SpecAlign - processing and alignment of mass spectra datasets Bioinformatics 21 2088 2090
-
(2005)
Bioinformatics
, vol.21
, pp. 2088-2090
-
-
Wong, J.W.H.1
Cagney, G.2
Cartwright, H.M.3
-
90
-
-
0037690801
-
MetNet: Software to build and model the biogenetic lattice of Arabidopsis
-
Wurtele ES Li J Diao L Zhang H Foster CM Fatland B Dickerson J Brown A Cox Z Cook D Lee E-K Hofmann H 2003 MetNet: software to build and model the biogenetic lattice of Arabidopsis Comparative and Functional Genomics 4 239 245
-
(2003)
Comparative and Functional Genomics
, vol.4
, pp. 239-245
-
-
Wurtele, E.S.1
Li, J.2
Diao, L.3
Zhang, H.4
Foster, C.M.5
Fatland, B.6
Dickerson, J.7
Brown, A.8
Cox, Z.9
Cook, D.10
Lee, E.-K.11
Hofmann, H.12
|