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Volumn 12, Issue 5, 2010, Pages 705-711

The use of COLD-PCR and high-resolution melting analysis improves the limit of detection of KRAS and BRAF mutations in colorectal cancer

Author keywords

[No Author keywords available]

Indexed keywords

B RAF KINASE; K RAS PROTEIN;

EID: 77956792325     PISSN: 15251578     EISSN: None     Source Type: Journal    
DOI: 10.2353/jmoldx.2010.100018     Document Type: Article
Times cited : (57)

References (40)
  • 1
    • 41649102043 scopus 로고    scopus 로고
    • The cancer biomarker problem
    • Sawyers CL: The cancer biomarker problem. Nature 2008, 452:548-552
    • (2008) Nature , vol.452 , pp. 548-552
    • Sawyers, C.L.1
  • 3
    • 67349152647 scopus 로고    scopus 로고
    • Treatment in advanced colorectal cancer: What, when and how?
    • Chau I, Cunningham D: Treatment in advanced colorectal cancer: what, when and how? Br J Cancer 2009, 100:1704-1719
    • (2009) Br J Cancer , vol.100 , pp. 1704-1719
    • Chau, I.1    Cunningham, D.2
  • 4
    • 67650349829 scopus 로고    scopus 로고
    • Recent advances in systemic therapy: New diagnostics and biological predictors of outcome in early breast cancer
    • Oakman C, Bessi S, Zafarana E, Galardi F, Biganzoli L, Di Leo A: Recent advances in systemic therapy: new diagnostics and biological predictors of outcome in early breast cancer. Breast Cancer Res 2009, 11:205-216
    • (2009) Breast Cancer Res , vol.11 , pp. 205-216
    • Oakman, C.1    Bessi, S.2    Zafarana, E.3    Galardi, F.4    Biganzoli, L.5    Di Leo, A.6
  • 5
    • 68949209102 scopus 로고    scopus 로고
    • Overview of molecular testing in non-small-cell lung cancer: Mutational analysis, gene copy number, protein expression and other biomarkers of EGFR for the prediction of response to tyrosine kinase inhibitors
    • John T, Liu G, Tsao MS: Overview of molecular testing in non-small-cell lung cancer: mutational analysis, gene copy number, protein expression and other biomarkers of EGFR for the prediction of response to tyrosine kinase inhibitors. Oncogene 2009, 28(Suppl1):S14-S23
    • (2009) Oncogene , vol.28 , Issue.SUPPL. 1
    • John, T.1    Liu, G.2    Tsao, M.S.3
  • 6
    • 67649935641 scopus 로고    scopus 로고
    • Genomic approaches to outcome prediction in prostate cancer
    • Febbo PG: Genomic approaches to outcome prediction in prostate cancer. Cancer 2009, 115:3046-3057
    • (2009) Cancer , vol.115 , pp. 3046-3057
    • Febbo, P.G.1
  • 7
    • 66149105905 scopus 로고    scopus 로고
    • Molecular pathology of head and neck cancer: Implications for diagnosis, prognosis, and treatment
    • Pai SI, Westra WH: Molecular pathology of head and neck cancer: implications for diagnosis, prognosis, and treatment. Annu Rev Pathol 2009, 4:49-70
    • (2009) Annu Rev Pathol , vol.4 , pp. 49-70
    • Pai, S.I.1    Westra, W.H.2
  • 8
    • 61449154484 scopus 로고    scopus 로고
    • KRAS mutations and sensitivity to epidermal growth factor receptor inhibitors in colorectal cancer: Practical application of patient selection
    • Jimeno A, Messersmith WA, Hirsch FR, Franklin WA, Eckhardt SG: KRAS mutations and sensitivity to epidermal growth factor receptor inhibitors in colorectal cancer: practical application of patient selection. J Clin Oncol 2009, 27:1130-1136
    • (2009) J Clin Oncol , vol.27 , pp. 1130-1136
    • Jimeno, A.1    Messersmith, W.A.2    Hirsch, F.R.3    Franklin, W.A.4    Eckhardt, S.G.5
  • 9
    • 0033757709 scopus 로고    scopus 로고
    • Epidermal growth factor receptor tyrosine kinase as a target for anticancer therapy
    • Raymond E, Faivre S, Armand JP: Epidermal growth factor receptor tyrosine kinase as a target for anticancer therapy. Drugs 2000, 60:15-23
    • (2000) Drugs , vol.60 , pp. 15-23
    • Raymond, E.1    Faivre, S.2    Armand, J.P.3
  • 10
    • 0034722889 scopus 로고    scopus 로고
    • The EGF receptor family as targets for cancer therapy
    • DOI 10.1038/sj.onc.1204082
    • Mendelsohn J, Baselga J: The EGF receptor family as targets for cancer therapy. Oncogene 2000, 19:6550-6565 (Pubitemid 32197693)
    • (2000) Oncogene , vol.19 , Issue.56 , pp. 6550-6565
    • Mendelsohn, J.1    Baselga, J.2
  • 11
    • 34249723218 scopus 로고    scopus 로고
    • Cetuximab, a chimeric human mouse anti-epidermal growth factor receptor monoclonal antibody, in the treatment of human colorectal cancer
    • DOI 10.1038/sj.onc.1210381, PII 1210381
    • Galizia G, Lieto E, De Vita F, Orditura M, Castellano P, Troiani T, Imperatore V, Ciardiello F: Cetuximab, a chimeric human mouse anti-epidermal growth factor receptor monoclonal antibody, in the treatment of human colorectal cancer. Oncogene 2007, 26:3654-3660 (Pubitemid 46842715)
    • (2007) Oncogene , vol.26 , Issue.25 , pp. 3654-3660
    • Galizia, G.1    Lieto, E.2    De Vita, F.3    Orditura, M.4    Castellano, P.5    Troiani, T.6    Imperatore, V.7    Ciardiello, F.8
  • 12
    • 77949435827 scopus 로고    scopus 로고
    • Molecular mechanisms of resistance to cetuximab and panitumumab in colorectal cancer
    • Bardelli A, Siena S: Molecular mechanisms of resistance to cetuximab and panitumumab in colorectal cancer. J Clin Oncol 2010, 28:1254-1261
    • (2010) J Clin Oncol , vol.28 , pp. 1254-1261
    • Bardelli, A.1    Siena, S.2
  • 13
    • 69949157429 scopus 로고    scopus 로고
    • Prospective cost-effectiveness analysis of cetuximab in metastatic colorectal cancer: Evaluation of National Cancer Institute of Canada Clinical Trials Group CO 17 Trial
    • Working Group on Economic Analysis of the National Cancer Institute of Canada Clinical Trials Group Australasian Gastrointestinal Interest Group
    • Mittmann N, Au HJ, Tu D, O'Callaghan CJ, Isogai PK, Karapetis CS, Zalcberg JR, Evans WK, Moore MJ, Siddiqui J, Findlay B, Colwell B, Simes J, Gibbs P, Links M, Tebbutt NC, Jonker DJ: Working Group on Economic Analysis of the National Cancer Institute of Canada Clinical Trials Group Australasian Gastrointestinal Interest Group. Prospective cost-effectiveness analysis of cetuximab in metastatic colorectal cancer: evaluation of National Cancer Institute of Canada Clinical Trials Group CO 17 Trial. J Natl Cancer Inst 2009, 101:1182-1192
    • (2009) J Natl Cancer Inst , vol.101 , pp. 1182-1192
    • Mittmann, N.1    Au, H.J.2    Tu, D.3    O'Callaghan, C.J.4    Isogai, P.K.5    Karapetis, C.S.6    Zalcberg, J.R.7    Evans, W.K.8    Moore, M.J.9    Siddiqui, J.10    Findlay, B.11    Colwell, B.12    Simes, J.13    Gibbs, P.14    Links, M.15    Tebbutt, N.C.16    Jonker, D.J.17
  • 14
    • 75549090214 scopus 로고    scopus 로고
    • Frequency and type of KRAS mutations in routine diagnostic analysis of metastatic colorectal cancer
    • Neumann J, Zeindl-Eberhart E, Kirchner T, Jung A: Frequency and type of KRAS mutations in routine diagnostic analysis of metastatic colorectal cancer. Pathol Res Pract 2009, 205:858-862
    • (2009) Pathol Res Pract , vol.205 , pp. 858-862
    • Neumann, J.1    Zeindl-Eberhart, E.2    Kirchner, T.3    Jung, A.4
  • 15
    • 65349189958 scopus 로고    scopus 로고
    • American Society of Clinical Oncology provisional clinical opinion: Testing for KRAS gene mutations in patients with metastatic colorectal carcinoma to predict response to anti-epidermal growth factor receptor monoclonal antibody therapy
    • Allegra CJ, Jessup JM, Somerfield MR, Hamilton SR, Hammond EH, Hayes DF, McAllister PK, Morton RF, Schilsky RL: American Society of Clinical Oncology provisional clinical opinion: testing for KRAS gene mutations in patients with metastatic colorectal carcinoma to predict response to anti-epidermal growth factor receptor monoclonal antibody therapy. J Clin Oncol 2009, 27:2091-2096
    • (2009) J Clin Oncol , vol.27 , pp. 2091-2096
    • Allegra, C.J.1    Jessup, J.M.2    Somerfield, M.R.3    Hamilton, S.R.4    Hammond, E.H.5    Hayes, D.F.6    McAllister, P.K.7    Morton, R.F.8    Schilsky, R.L.9
  • 19
    • 73349114941 scopus 로고    scopus 로고
    • KRAS and BRAF mutations in advanced colorectal cancer are associated with poor prognosis but do not preclude benefit from oxaliplatin or irinotecan: Results from the MRC FOCUS Trial
    • Richman SD, Seymour MT, Chambers P, Elliott F, Daly CL, Meade AM, Taylor G, Barrett JH, Quirke P: KRAS and BRAF mutations in advanced colorectal cancer are associated with poor prognosis but do not preclude benefit from oxaliplatin or irinotecan: results from the MRC FOCUS Trial. J Clin Oncol 2009, 27:5931-5937
    • (2009) J Clin Oncol , vol.27 , pp. 5931-5937
    • Richman, S.D.1    Seymour, M.T.2    Chambers, P.3    Elliott, F.4    Daly, C.L.5    Meade, A.M.6    Taylor, G.7    Barrett, J.H.8    Quirke, P.9
  • 21
    • 70450184902 scopus 로고    scopus 로고
    • Anti-Egfr Therapy in Colorectal Cancer: How to Choose the Right Patient
    • Meriggi F, Di Biasi B, Abeni C, Zaniboni A: Anti-Egfr Therapy in Colorectal Cancer: how to Choose the Right Patient. Curr Drug Targets 2009, 10:1033-1040
    • (2009) Curr Drug Targets , vol.10 , pp. 1033-1040
    • Meriggi, F.1    Di Biasi, B.2    Abeni, C.3    Zaniboni, A.4
  • 22
    • 66349132761 scopus 로고    scopus 로고
    • Assessing high-resolution melt curve analysis for accurate detection of gene variants in complex DNA fragments
    • Tindall EA, Petersen DC, Woodbridge P, Schipany K, Hayes VM: Assessing high-resolution melt curve analysis for accurate detection of gene variants in complex DNA fragments. Hum Mutat 2009, 30:876-883
    • (2009) Hum Mutat , vol.30 , pp. 876-883
    • Tindall, E.A.1    Petersen, D.C.2    Woodbridge, P.3    Schipany, K.4    Hayes, V.M.5
  • 23
    • 66349095408 scopus 로고    scopus 로고
    • High-resolution DNA melting analysis: Advancements and limitations
    • Wittwer CT: High-resolution DNA melting analysis: advancements and limitations. Hum Mutat 2009, 30:857-859
    • (2009) Hum Mutat , vol.30 , pp. 857-859
    • Wittwer, C.T.1
  • 24
    • 66349090454 scopus 로고    scopus 로고
    • High-resolution melting analysis (HRMA): More than just sequence variant screening
    • Vossen RH, Aten E, Roos A, den Dunnen JT: High-resolution melting analysis (HRMA): more than just sequence variant screening. Hum Mutat 2009, 30:860-866
    • (2009) Hum Mutat , vol.30 , pp. 860-866
    • Vossen, R.H.1    Aten, E.2    Roos, A.3    Den Dunnen, J.T.4
  • 25
    • 65549160923 scopus 로고    scopus 로고
    • Mutation scanning using high-resolution melting
    • Taylor CF: Mutation scanning using high-resolution melting. Biochem Soc Trans 2009, 37:433-437
    • (2009) Biochem Soc Trans , vol.37 , pp. 433-437
    • Taylor, C.F.1
  • 26
    • 36448935640 scopus 로고    scopus 로고
    • Pyrosequencing for discovery and analysis of DNA sequence variations
    • Ronaghi M, Shokralla S, Gharizadeh B: Pyrosequencing for discovery and analysis of DNA sequence variations. Pharmacogenomics 2007, 8:1437-1441
    • (2007) Pharmacogenomics , vol.8 , pp. 1437-1441
    • Ronaghi, M.1    Shokralla, S.2    Gharizadeh, B.3
  • 27
    • 17044388155 scopus 로고    scopus 로고
    • Genetic variation analyses by Pyrosequencing
    • Langaee T, Ronaghi M: Genetic variation analyses by Pyrosequencing. Mutat Res 2005, 573:96-102
    • (2005) Mutat Res , vol.573 , pp. 96-102
    • Langaee, T.1    Ronaghi, M.2
  • 28
    • 84887212479 scopus 로고    scopus 로고
    • Mutation detection by real-time PCR: A simple, robust and highly selective method
    • Morlan J, Baker J, Sinicropi D: Mutation detection by real-time PCR: a simple, robust and highly selective method. PLoS One 2009, 4:e4584
    • (2009) PLoS One , vol.4
    • Morlan, J.1    Baker, J.2    Sinicropi, D.3
  • 30
    • 0033755718 scopus 로고    scopus 로고
    • PCR clamping
    • Review
    • Orum H: PCR clamping. Curr Issues Mol Biol 2000, 2:27-30. Review.
    • (2000) Curr Issues Mol Biol , vol.2 , pp. 27-30
    • Orum, H.1
  • 32
    • 43249116705 scopus 로고    scopus 로고
    • Replacing PCR with COLD-PCR enriches variant DNA sequences and redefines the sensitivity of genetic testing
    • Li J, Wang L, Mamon H, Kulke MH, Berbeco R, Makrigiorgos GM: Replacing PCR with COLD-PCR enriches variant DNA sequences and redefines the sensitivity of genetic testing. Nat Med 2008, 14:579-584
    • (2008) Nat Med , vol.14 , pp. 579-584
    • Li, J.1    Wang, L.2    Mamon, H.3    Kulke, M.H.4    Berbeco, R.5    Makrigiorgos, G.M.6
  • 33
    • 70350704817 scopus 로고    scopus 로고
    • Two-round coamplification at lower denaturation temperature-PCR (COLD-PCR)-based sanger sequencing identifies a novel spectrum of low-level mutations in lung adenocarcinoma
    • Li J, Milbury CA, Li C, Makrigiorgos GM: Two-round coamplification at lower denaturation temperature-PCR (COLD-PCR)-based sanger sequencing identifies a novel spectrum of low-level mutations in lung adenocarcinoma. Hum Mutat 2009, 30:1583-1590
    • (2009) Hum Mutat , vol.30 , pp. 1583-1590
    • Li, J.1    Milbury, C.A.2    Li, C.3    Makrigiorgos, G.M.4
  • 35
    • 4644245816 scopus 로고    scopus 로고
    • Sensitivity and specificity of single-nucleotide polymorphism scanning by high-resolution melting analysis
    • Reed GH, Wittwer CT: Sensitivity and specificity of single-nucleotide polymorphism scanning by high-resolution melting analysis. Clin Chem 2004, 50:1748-1754
    • (2004) Clin Chem , vol.50 , pp. 1748-1754
    • Reed, G.H.1    Wittwer, C.T.2
  • 36
    • 23044509486 scopus 로고    scopus 로고
    • Distinguishing different DNA heterozygotes by high-resolution melting
    • Graham R, Liew M, Meadows C, Lyon E, Wittwer CT: Distinguishing different DNA heterozygotes by high-resolution melting. Clin Chem 2005, 51:1295-1298
    • (2005) Clin Chem , vol.51 , pp. 1295-1298
    • Graham, R.1    Liew, M.2    Meadows, C.3    Lyon, E.4    Wittwer, C.T.5
  • 37
    • 71749087974 scopus 로고    scopus 로고
    • COLD-PCR-enhanced high-resolution melting enables rapid and selective identification of low-level unknown mutations
    • Milbury CA, Li J, Makrigiorgos GM: COLD-PCR-enhanced high-resolution melting enables rapid and selective identification of low-level unknown mutations. Clin Chem 2009, 55:2130-2143
    • (2009) Clin Chem , vol.55 , pp. 2130-2143
    • Milbury, C.A.1    Li, J.2    Makrigiorgos, G.M.3
  • 39
    • 6944230093 scopus 로고    scopus 로고
    • Colon cancer survival rates with the new American Joint Committee on Cancer sixth edition staging
    • DOI 10.1093/jnci/djh275
    • O'Connell JB, Maggard MA, Ko CY: Colon cancer survival rates with the new American Joint Committee on Cancer ed 4 staging. J Natl Cancer Inst 2004, 6:1420-1425 (Pubitemid 39429665)
    • (2004) Journal of the National Cancer Institute , vol.96 , Issue.19 , pp. 1420-1425
    • O'Connell, J.B.1    Maggard, M.A.2    Ko, C.Y.3


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