Analysis of microscopic parameters of single-particle trajectories in neurons

Biophysical Journal

Volumn 99, Issue 5, 2010, Pages 1368-1376

  Burlakov, V M ^a,b   Taylor, R ^a   Koerner, J ^a   Emptage, N ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

^b INSTITUTE OF SPECTROSCOPY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 77956592275     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1016/j.bpj.2010.06.021     Document Type: Article

References (26)

1. Saxton, M. J., and K. Jacobson. 1997. Single-particle tracking: applications to membrane dynamics. Annu. Rev. Biophys. Biomol. Struct. 26:373-399.
2. Kusumi, A., Y. Sako, and M. Yamamoto. 1993. Confined lateral diffusion of membrane receptors as studied by single particle tracking (nanovid microscopy). Effects of calcium-induced differentiation in cultured epithelial cells. Biophys. J. 65:2021-2040.
3. Saxton, M. J. 1994. Single-particle tracking: models of directed transport. Biophys. J. 67:2110-2119.
4. Saxton, M. J. 1997. Single-particle tracking: the distribution of diffusion coefficients. Biophys. J. 72:1744-1753.
5. Dahan, M., S. Lévi, A. Triller. 2003. Diffusion dynamics of glycine receptors revealed by single-quantum dot tracking. Science. 302:442-445.
6. Courty, S., C. Bouzigues, M. Dahan. 2006. Tracking individual proteins in living cells using single quantum dot imaging. Methods Enzymol. 414:211-228. (Pubitemid 44716224)
7. Echarte, M. M., L. Bruno, L. I. Pietrasanta. 2007. Quantitative single particle tracking of NGF-receptor complexes: transport is bidirectional but biased by longer retrograde run lengths. FEBS Lett. 581:2905-2913.
8. Triller, A., and D. Choquet. 2008. New concepts in synaptic biology derived from single-molecule imaging. Neuron. 59:359-374.
9. Sako, Y., and A. Kusumi. 1994. Compartmentalized structure of the plasma membrane for receptor movements as revealed by a nanometer-level motion analysis. J. Cell Biol. 125:1251-1264.
10. Dietrich, C., B. Yang, K. Jacobson. 2002. Relationship of lipid rafts to transient confinement zones detected by single particle tracking. Biophys. J. 82:274-284.
11. Qian, H., M. P. Sheetz, and E. L. Elson. 1991. Single particle tracking. Analysis of diffusion and flow in two-dimensional systems. Biophys. J. 60:910-921.
12. Bats, C., L. Groc, and D. Choquet. 2007. The interaction between Stargazin and PSD-95 regulates AMPA receptor surface trafficking. Neuron. 53:719-734.
13. Haggie, P. M., J. K. Kim, A. S. Verkman. 2006. Tracking of quantum dot-labeled CFTR shows near immobilization by C-terminal PDZ interactions. Mol. Biol. Cell. 17:4937-4945.
14. Sergé, A., L. Fourgeaud, D. Choquet. 2002. Receptor activation and homer differentially control the lateral mobility of metabotropic glutamate receptor 5 in the neural membrane. J. Neurosci. 22:3910-3920.
15. Serge, A., L. Fourgeaud, D. Choquet. 2003. Active surface transport of metabotropic glutamate receptors through binding to microtubules and actin flow. J. Cell Sci. 116:5015-5022.
16. Landau, L. D., and E. M. Lifshitz. 1969. Statistical Physics. Pergamon Press, Oxford, United Kingdom.
17. Lee, G. M., A. Ishihara, and K. A. Jacobson. 1991. Direct observation of Brownian motion of lipids in a membrane. Proc. Natl. Acad. Sci. USA. 88:6274-6278.
18. Tardin, C., L. Cognet, D. Choquet. 2003. Direct imaging of lateral movements of AMPA receptors inside synapses. EMBO J. 22:4656-4665.
19. Zhou, R. 1998. The Eph family receptors and ligands. Pharmacol. Ther. 77:151-181.
20. Klein, R. 2009. Bidirectional modulation of synaptic functions by Eph/ephrin signaling. Nat. Neurosci. 12:15-20.
21. Irie, F., and Y. Yamaguchi. 2002. EphB receptors regulate dendritic spine development via intersectin, Cdc42 and N-WASP. Nat. Neurosci. 5:1117-1118.
22. Penzes, P., A. Beeser, R. L. Huganir. 2003. Rapid induction of dendritic spine morphogenesis by trans-synaptic ephrinB-EphB receptor activation of the Rho-GEF kalirin. Neuron. 37:263-274.
23. Groc, L., M. Heine, D. Choquet. 2004. Differential activitydependent regulation of the lateral mobilities of AMPA and NMDA receptors. Nat. Neurosci. 7:695-696.
24. Meier, J., C. Vannier, D. Choquet. 2001. Fast and reversible trapping of surface glycine receptors by gephyrin. Nat. Neurosci. 4:253-260.
25. Charrier, C., M. V. Ehrensperger, A. Triller. 2006. Cytoskeleton regulation of glycine receptor number at synapses and diffusion in the plasma membrane. J. Neurosci. 26:8502-8511.
26. Contractor, A., C. Rogers, S. F. Heinemann. 2002. Trans-synaptic Eph receptor-ephrin signaling in hippocampal mossy fiber LTP. Science. 296:1864-1869.