-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25 : 3389 3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0037447834
-
Microbial communities in acid mine drainage
-
Baker BJ Banfield JF (2003) Microbial communities in acid mine drainage. FEMS Microbiol Ecol 44 : 139 152.
-
(2003)
FEMS Microbiol Ecol
, vol.44
, pp. 139-152
-
-
Baker, B.J.1
Banfield, J.F.2
-
3
-
-
0037209664
-
Monitoring of a pyrite-oxidising bacterial population using DNA single-strand conformation polymorphism and microscopic techniques
-
Battaglia-Brunet F, Clarens M, d'Hugues P, Godon JJ, Foucher S Morin D (2002) Monitoring of a pyrite-oxidising bacterial population using DNA single-strand conformation polymorphism and microscopic techniques. Appl Microbiol Biot 60 : 206 211.
-
(2002)
Appl Microbiol Biot
, vol.60
, pp. 206-211
-
-
Battaglia-Brunet, F.1
Clarens, M.2
D'Hugues, P.3
Godon, J.J.4
Foucher, S.5
Morin, D.6
-
4
-
-
0033754225
-
Comparison of acid mine drainage microbial communities in physically and geochemically distinct ecosystems
-
Bond PL, Druschel GK Banfield JF (2000a) Comparison of acid mine drainage microbial communities in physically and geochemically distinct ecosystems. Appl Environ Microb 66 : 4962 4971.
-
(2000)
Appl Environ Microb
, vol.66
, pp. 4962-4971
-
-
Bond, P.L.1
Druschel, G.K.2
Banfield, J.F.3
-
5
-
-
0000260742
-
Mechanisms and rate limiting steps in bioleaching of sphalerite, chalcopyrite, and pyrite with Thiobacillus ferrooxidans
-
Torma, A.E. Wey, J.I. Lakshmanan, V.L. eds), Bioleaching Processes 217
-
Boon M Heijnen JJ (1993) Mechanisms and rate limiting steps in bioleaching of sphalerite, chalcopyrite, and pyrite with Thiobacillus ferrooxidans. Biohydrometallurgy Technologies, the Minerals, Metals and Materials Society (Torma AE, Wey JI Lakshmanan VL, eds), Bioleaching Processes 217.
-
(1993)
Biohydrometallurgy Technologies, the Minerals, Metals and Materials Society
-
-
Boon, M.1
Heijnen, J.J.2
-
6
-
-
0001133432
-
The role of bacterial ferrous iron oxidation in the bio-oxidation of pyrite
-
Vargas, T. Jerez, C. Wiertz, J. Toledo, H. eds), University of Chile Press. Santiago, Chile
-
Boon M, Hansford G Heijnen J (1995) The role of bacterial ferrous iron oxidation in the bio-oxidation of pyrite. International Biohydrometallurgy Symposium (Vargas T, Jerez C, Wiertz J Toledo H, eds), pp. 153 164. University of Chile Press, Santiago, Chile.
-
(1995)
International Biohydrometallurgy Symposium
, pp. 153-164
-
-
Boon, M.1
Hansford, G.2
Heijnen, J.3
-
7
-
-
0035254579
-
Bacterial succession in bioheap leaching
-
Brierley C (2001) Bacterial succession in bioheap leaching. Hydrometallurgy 59 : 249 255.
-
(2001)
Hydrometallurgy
, vol.59
, pp. 249-255
-
-
Brierley, C.1
-
8
-
-
17544390961
-
Identification of and spatio-temporal differences between microbial assemblages from two neighboring sulfurous lakes: Comparison by microscopy and denaturing gradient gel electrophoresis
-
Casamayor EO, Schafer H, Baneras L, Pedros-Alio C Muyzer G (2000) Identification of and spatio-temporal differences between microbial assemblages from two neighboring sulfurous lakes: comparison by microscopy and denaturing gradient gel electrophoresis. Appl Environ Microb 66 : 499 508.
-
(2000)
Appl Environ Microb
, vol.66
, pp. 499-508
-
-
Casamayor, E.O.1
Schafer, H.2
Baneras, L.3
Pedros-Alio, C.4
Muyzer, G.5
-
9
-
-
0036205618
-
Microheterogeneity in 16S ribosomal DNA-defined bacterial populations from a stratified planktonic environment is related to temporal changes and to ecological adaptations
-
Casamayor EO, Pedros-Alio C, Muyzer G Amann R (2002) Microheterogeneity in 16S ribosomal DNA-defined bacterial populations from a stratified planktonic environment is related to temporal changes and to ecological adaptations. Appl Environ Microb 68 : 1706 1714.
-
(2002)
Appl Environ Microb
, vol.68
, pp. 1706-1714
-
-
Casamayor, E.O.1
Pedros-Alio, C.2
Muyzer, G.3
Amann, R.4
-
10
-
-
0036151760
-
Molecular relationship between two groups of the genus Leptospirillum and the finding that Leptospirillum ferriphilum sp. nov. dominates South African commercial biooxidation tanks that operate at 40 degrees
-
Coram NJ Rawlings DE (2002) Molecular relationship between two groups of the genus Leptospirillum and the finding that Leptospirillum ferriphilum sp. nov. dominates South African commercial biooxidation tanks that operate at 40 degrees. Appl Environ Microb 68 : 838 845.
-
(2002)
Appl Environ Microb
, vol.68
, pp. 838-845
-
-
Coram, N.J.1
Rawlings, D.E.2
-
11
-
-
28044445687
-
Molecular characterization of microbial populations in a low-grade copper ore
-
Demergasso CS, Galleguillos PPA Escudero GLV (2005) Molecular characterization of microbial populations in a low-grade copper ore. Hydrometallurgy 80 : 241 253.
-
(2005)
Hydrometallurgy
, vol.80
, pp. 241-253
-
-
Demergasso, C.S.1
Galleguillos, P.P.A.2
Escudero, G.L.V.3
-
12
-
-
0032795447
-
Seasonal variations in microbial populations and environmental conditions in an extreme acid mine drainage environment
-
Edwards KJ, Gihring TM Banfield JF (1999) Seasonal variations in microbial populations and environmental conditions in an extreme acid mine drainage environment. Appl Environ Microb 65 : 3627 3632.
-
(1999)
Appl Environ Microb
, vol.65
, pp. 3627-3632
-
-
Edwards, K.J.1
Gihring, T.M.2
Banfield, J.F.3
-
13
-
-
0035254044
-
Past, present and future of biohydrometallurgy
-
Ehrlich HL (2001) Past, present and future of biohydrometallurgy. Hydrometallurgy 59 : 127 134.
-
(2001)
Hydrometallurgy
, vol.59
, pp. 127-134
-
-
Ehrlich, H.L.1
-
14
-
-
0033015720
-
Mechanism of pyrite dissolution in the presence of Thiobacillus ferrooxidans
-
Fowler TA, Holmes PR Crundwell FK (1999) Mechanism of pyrite dissolution in the presence of Thiobacillus ferrooxidans. Appl Environ Microb 65 : 2987 2993.
-
(1999)
Appl Environ Microb
, vol.65
, pp. 2987-2993
-
-
Fowler, T.A.1
Holmes, P.R.2
Crundwell, F.K.3
-
15
-
-
53449084479
-
Identification of differentially expressed genes in an industrial bioleaching heap processing low-grade copper sulphide ore elucidated by RNA arbitrarily primed polymerase chain reaction
-
Galleguillos P, Remonsellez F, Galleguillos F, Guiliani N, Castillo D Demergasso C (2008) Identification of differentially expressed genes in an industrial bioleaching heap processing low-grade copper sulphide ore elucidated by RNA arbitrarily primed polymerase chain reaction. Hydrometallurgy 94 : 148 154.
-
(2008)
Hydrometallurgy
, vol.94
, pp. 148-154
-
-
Galleguillos, P.1
Remonsellez, F.2
Galleguillos, F.3
Guiliani, N.4
Castillo, D.5
Demergasso, C.6
-
16
-
-
0028205668
-
Cultural and phylogenetic analysis of mixed microbial populations found in natural and commercial bioleaching environments
-
Goebel BM Stackebrandt E (1994) Cultural and phylogenetic analysis of mixed microbial populations found in natural and commercial bioleaching environments. Appl Environ Microb 60 : 1614 1621.
-
(1994)
Appl Environ Microb
, vol.60
, pp. 1614-1621
-
-
Goebel, B.M.1
Stackebrandt, E.2
-
17
-
-
0032801340
-
Silver-catalysed bioleaching of a chalcopyrite concentrate with mixed cultures of moderately thermophilic microorganisms
-
Gomez E, Ballester A, Blazquez ML Gonzalez F (1999a) Silver-catalysed bioleaching of a chalcopyrite concentrate with mixed cultures of moderately thermophilic microorganisms. Hydrometallurgy 51 : 17 46.
-
(1999)
Hydrometallurgy
, vol.51
, pp. 17-46
-
-
Gomez, E.1
Ballester, A.2
Blazquez, M.L.3
Gonzalez, F.4
-
18
-
-
0344718592
-
Leaching capacity of a new extremely thermophilic microorganism, Sulfolobus rivotinct
-
Gomez E, Ballester A, Gonzalez F Blazquez ML (1999b) Leaching capacity of a new extremely thermophilic microorganism, Sulfolobus rivotinct. Hydrometallurgy 52 : 349 366.
-
(1999)
Hydrometallurgy
, vol.52
, pp. 349-366
-
-
Gomez, E.1
Ballester, A.2
Gonzalez, F.3
Blazquez, M.L.4
-
20
-
-
40349097761
-
Microbial diversity in acid mineral bioleaching systems of dongxiang copper mine and Yinshan lead-zinc mine
-
He ZG, Xiao SM, Xie XH Hu YH (2008) Microbial diversity in acid mineral bioleaching systems of dongxiang copper mine and Yinshan lead-zinc mine. Extremophiles 12 : 225 234.
-
(2008)
Extremophiles
, vol.12
, pp. 225-234
-
-
He, Z.G.1
Xiao, S.M.2
Xie, X.H.3
Hu, Y.H.4
-
21
-
-
0034026744
-
Leptospirillum gen. nov. (ex Markosyan 1972), nom. rev., including Leptospirillum ferrooxidans sp. nov. (ex Markosyan 1972), nom. rev. and Leptospirillum
-
Hippe H (2000) Leptospirillum gen. nov. (ex Markosyan 1972), nom. rev., including Leptospirillum ferrooxidans sp. nov. (ex Markosyan 1972), nom. rev. and Leptospirillum. Int J Syst Evol Micr 2 : 501 503.
-
(2000)
Int J Syst Evol Micr
, vol.2
, pp. 501-503
-
-
Hippe, H.1
-
22
-
-
0034056895
-
Monitoring impact of in situ biostimulation treatment on groundwater bacterial community by DGGE
-
Iwamoto T, Tani K, Nakamura K, Suzuki Y, Kitagawa M, Eguchi M Nasu M (2000) Monitoring impact of in situ biostimulation treatment on groundwater bacterial community by DGGE. FEMS Microbiol Ecol 1123 : 1 13.
-
(2000)
FEMS Microbiol Ecol
, vol.1123
, pp. 1-13
-
-
Iwamoto, T.1
Tani, K.2
Nakamura, K.3
Suzuki, Y.4
Kitagawa, M.5
Eguchi, M.6
Nasu, M.7
-
23
-
-
0032423975
-
Biodiversity and ecology of acidophilic microorganisms
-
Johnson DB (1998) Biodiversity and ecology of acidophilic microorganisms. FEMS Microbiol Ecol 27 : 307 317.
-
(1998)
FEMS Microbiol Ecol
, vol.27
, pp. 307-317
-
-
Johnson, D.B.1
-
24
-
-
33644822184
-
Fe(III) mineral formation and cell encrustation by the nitrate-dependent Fe(II)-oxidizer strain BoFeN1
-
Kappler A, Schink B Newman DK (2005) Fe(III) mineral formation and cell encrustation by the nitrate-dependent Fe(II)-oxidizer strain BoFeN1. Geobiology 3 : 235 245.
-
(2005)
Geobiology
, vol.3
, pp. 235-245
-
-
Kappler, A.1
Schink, B.2
Newman, D.K.3
-
25
-
-
27744511292
-
Leaching of chalcopyrite and sphalerite using bacteria enriched from a spent chalcocite heap
-
Keeling SE, Palmer ML, Caracatsanis FC, Johnson JA Watling HR (2005) Leaching of chalcopyrite and sphalerite using bacteria enriched from a spent chalcocite heap. Miner Eng 18 : 1289 1296.
-
(2005)
Miner Eng
, vol.18
, pp. 1289-1296
-
-
Keeling, S.E.1
Palmer, M.L.2
Caracatsanis, F.C.3
Johnson, J.A.4
Watling, H.R.5
-
26
-
-
0032807728
-
Anaerobic mineralization of quaternary carbon atoms: Isolation of denitrifying bacteria on dimethylmalonate
-
Kniemeyer O, Probian C, Rossello-mora R Harder J (1999) Anaerobic mineralization of quaternary carbon atoms: isolation of denitrifying bacteria on dimethylmalonate. Appl Environ Microb 65 : 3319 3324.
-
(1999)
Appl Environ Microb
, vol.65
, pp. 3319-3324
-
-
Kniemeyer, O.1
Probian, C.2
Rossello-Mora, R.3
Harder, J.4
-
27
-
-
0001857117
-
16S/23S rDNA sequencing
-
Stackebrandt, E. Goodfellow, M. eds), Wiley. Chichester
-
Lane DJ (1991) 16S/23S rDNA sequencing. Nucleic Acid Techniques in Bacterial Systematics (Stackebrandt E Goodfellow M, eds), pp. 115 175. Wiley, Chichester.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
28
-
-
0001868073
-
Denaturing gradient gel electrophoresis (DGGE) in microbial ecology
-
Akkermans, A. van Elsas, J. de Bruijn, F. eds), Kluwer Academic Publishers. Dordrecht, the Netherlands
-
Muyzer G, Brinkhoff T, Nübel U, Santegoeds C, Schäfer H Wawer C (1996) Denaturing gradient gel electrophoresis (DGGE) in microbial ecology. Molecular Microbial Ecology Manual (Akkermans A, van Elsas J de Bruijn F, eds), pp. 1 27. Kluwer Academic Publishers, Dordrecht, the Netherlands.
-
(1996)
Molecular Microbial Ecology Manual
, pp. 1-27
-
-
Muyzer, G.1
Brinkhoff, T.2
Nübel, U.3
Santegoeds, C.4
Schäfer, H.5
Wawer, C.6
-
29
-
-
0001827294
-
Iron and mineral oxidation by acidophilic bacteria: Affinities for iron and attachment to pyrite
-
Norris, P.R. Kelly, D.P. eds), Kew. London
-
Norris P, Barr D Hinson D (1987) Iron and mineral oxidation by acidophilic bacteria: affinities for iron and attachment to pyrite. International Symposium on Biohydrometallurgy (Norris PR Kelly DP, eds), pp. 43 59. Kew, London.
-
(1987)
International Symposium on Biohydrometallurgy
, pp. 43-59
-
-
Norris, P.1
Barr, D.2
Hinson, D.3
-
30
-
-
0242668356
-
Enumeration and characterization of acidophilic microorganisms isolated from a pilot plant stirred-tank bioleaching operation
-
Okibe N, Gericke M, Hallberg KB Johnson DB (2003) Enumeration and characterization of acidophilic microorganisms isolated from a pilot plant stirred-tank bioleaching operation. Appl Environ Microb 69 : 1936 1943.
-
(2003)
Appl Environ Microb
, vol.69
, pp. 1936-1943
-
-
Okibe, N.1
Gericke, M.2
Hallberg, K.B.3
Johnson, D.B.4
-
31
-
-
36549046608
-
Growth and activity of pure and mixed bioleaching strains on low grade chalcopyrite ore
-
Plumb JJ, McSweeney NJ Franzmann PD (2008) Growth and activity of pure and mixed bioleaching strains on low grade chalcopyrite ore. Miner Eng 21 : 93 99.
-
(2008)
Miner Eng
, vol.21
, pp. 93-99
-
-
Plumb, J.J.1
McSweeney, N.J.2
Franzmann, P.D.3
-
32
-
-
40849141027
-
Heap bioleaching of chalcopyrite: A review
-
Pradhan N, Nathsarma KC, Srinivasa Rao K, Sukla LB Mishra BK (2008) Heap bioleaching of chalcopyrite: a review. Miner Eng 21 : 355 365.
-
(2008)
Miner Eng
, vol.21
, pp. 355-365
-
-
Pradhan, N.1
Nathsarma, K.C.2
Srinivasa Rao, K.3
Sukla, L.B.4
Mishra, B.K.5
-
33
-
-
22944490175
-
A comparison of bioleaching of chalcopyrite using pure culture or a mixed culture
-
Qiu MQ, Xiong SY, Zhang WM Wang GX (2005) A comparison of bioleaching of chalcopyrite using pure culture or a mixed culture. Miner Eng 18 : 987 990.
-
(2005)
Miner Eng
, vol.18
, pp. 987-990
-
-
Qiu, M.Q.1
Xiong, S.Y.2
Zhang, W.M.3
Wang, G.X.4
-
34
-
-
0028165830
-
Group specific 16S rRNA hybridization probes to describe natural communities of methanogens
-
Raskin L, Stromley JM Rittmann BE (1994) Group specific 16S rRNA hybridization probes to describe natural communities of methanogens. Appl Environ Microb 60 : 1232 1240.
-
(1994)
Appl Environ Microb
, vol.60
, pp. 1232-1240
-
-
Raskin, L.1
Stromley, J.M.2
Rittmann, B.E.3
-
35
-
-
0035254280
-
The molecular genetics of Thiobacillus ferrooxidans and other mesopholic, acidophilic, chemolithotrophic, ironor sulfur-oxidizing bacteria
-
Rawlings D (2001) The molecular genetics of Thiobacillus ferrooxidans and other mesopholic, acidophilic, chemolithotrophic, ironor sulfur-oxidizing bacteria. Hydrometallurgy 59 : 187 201.
-
(2001)
Hydrometallurgy
, vol.59
, pp. 187-201
-
-
Rawlings, D.1
-
36
-
-
0032931552
-
Reasons why 'Leptospirillum'-like species rather than Thiobacillus ferrooxidans are the dominant iron-oxidizing bacteria in many commercial processes for the biooxidation of pyrite and related ores
-
Rawlings DE, Tributsch H Hansford GS (1999) Reasons why 'Leptospirillum'-like species rather than Thiobacillus ferrooxidans are the dominant iron-oxidizing bacteria in many commercial processes for the biooxidation of pyrite and related ores. Microbiology 145 : 5 13.
-
(1999)
Microbiology
, vol.145
, pp. 5-13
-
-
Rawlings, D.E.1
Tributsch, H.2
Hansford, G.S.3
-
37
-
-
72449197472
-
Differential gene expression of industrial bioleaching transcriptomes by Leptospirillum ferrooxidans DNA Microarray
-
Remonsellez F, Moreno-Paz M, Parro V Demergasso C (2009) Differential gene expression of industrial bioleaching transcriptomes by Leptospirillum ferrooxidans DNA Microarray. Adv Mater Res 71-73 : 227 230.
-
(2009)
Adv Mater Res
, vol.7173
, pp. 227-230
-
-
Remonsellez, F.1
Moreno-Paz, M.2
Parro, V.3
Demergasso, C.4
-
38
-
-
0040569497
-
Thermophiles
-
Fleischmann, E.M. ed), Cold Spring Harbor Press. Cold Spring Harbor, NY
-
Robb FT, Sowers KR DasSharma S (1995) Thermophiles. Archaea: A Laboratory Manual (Fleischmann EM, ed), pp. 202 203. Cold Spring Harbor Press, Cold Spring Harbor, NY.
-
(1995)
Archaea: A Laboratory Manual
, pp. 202-203
-
-
Robb, F.T.1
Sowers, K.R.2
Dassharma, S.3
-
39
-
-
0031212533
-
Bioleaching of a complex sulphide ore with moderate thermophilic and extreme thermophilic microorganism
-
Sandström Å Petersson S (1997) Bioleaching of a complex sulphide ore with moderate thermophilic and extreme thermophilic microorganism. Hydrometallurgy 46 : 181 190.
-
(1997)
Hydrometallurgy
, vol.46
, pp. 181-190
-
-
Å, S.1
Petersson, S.2
-
40
-
-
0032076234
-
Kinetics of ferrous iron xidation by Leptospirillum bacteria in continuous cultures
-
Scherpenzeel D, Boon M, Ras C, Hansford G Heijnen J (1998) Kinetics of ferrous iron xidation by Leptospirillum bacteria in continuous cultures. Biotechnol Progr 14 : 425 433.
-
(1998)
Biotechnol Progr
, vol.14
, pp. 425-433
-
-
Scherpenzeel, D.1
Boon, M.2
Ras, C.3
Hansford, G.4
Heijnen, J.5
-
41
-
-
0028598812
-
The genetic data environment: An expandable GUI for multiple sequence analysis
-
Smith SW, Overbeek R Woese CR (1994) The genetic data environment: an expandable GUI for multiple sequence analysis. Comput Appl Biosci 10 : 671 675.
-
(1994)
Comput Appl Biosci
, vol.10
, pp. 671-675
-
-
Smith, S.W.1
Overbeek, R.2
Woese, C.R.3
-
43
-
-
0032975678
-
Changes in bacterial and eukaryotic community structure after mass lysis of lamentous cyanobacteria associated with viruses
-
Van Hannen EJ, Zwart G, vanAgterveld MP, Gons HJ, Ebert J Laanbroek HJ (1999) Changes in bacterial and eukaryotic community structure after mass lysis of lamentous cyanobacteria associated with viruses. Appl Environ Microb 65 : 795 801.
-
(1999)
Appl Environ Microb
, vol.65
, pp. 795-801
-
-
Van Hannen, E.J.1
Zwart, G.2
Vanagterveld, M.P.3
Gons, H.J.4
Ebert, J.5
Laanbroek, H.J.6
-
44
-
-
48149108905
-
Bioleaching of chalcopyrite with thermophiles: Temperature-pH-ORP dependence
-
Vilcáez J, Suto K Inoue C (2008) Bioleaching of chalcopyrite with thermophiles: temperature-pH-ORP dependence. Miner Process 88 : 37 44.
-
(2008)
Miner Process
, vol.88
, pp. 37-44
-
-
Vilcáez, J.1
Suto, K.2
Inoue, C.3
-
45
-
-
0026067797
-
16S ribosomal DNA amplification for phylogenetic study
-
Weisburg WG, Barns SM Pelletier DA (1991) 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173 : 697 703.
-
(1991)
J Bacteriol
, vol.173
, pp. 697-703
-
-
Weisburg, W.G.1
Barns, S.M.2
Pelletier, D.A.3
|