-
1
-
-
45449101889
-
A global pathway crosstalk network
-
Li Y., Agarwal P., Rajagopalan D. A global pathway crosstalk network. Bioinformatics 2008, 24(12):1442-1447.
-
(2008)
Bioinformatics
, vol.24
, Issue.12
, pp. 1442-1447
-
-
Li, Y.1
Agarwal, P.2
Rajagopalan, D.3
-
2
-
-
1242276498
-
TGFbeta and Wnt pathway cross-talk
-
Attisano L., Labbe E. TGFbeta and Wnt pathway cross-talk. Cancer Metastasis Rev 2004, 23(1-2):53-61.
-
(2004)
Cancer Metastasis Rev
, vol.23
, Issue.1-2
, pp. 53-61
-
-
Attisano, L.1
Labbe, E.2
-
3
-
-
1642482341
-
Crosstalk between plant responses to pathogens and herbivores: a view from the outside in
-
Taylor J.E., Hatcher P.E., Paul N.D. Crosstalk between plant responses to pathogens and herbivores: a view from the outside in. J Exp Bot 2004, 55(395):159-168.
-
(2004)
J Exp Bot
, vol.55
, Issue.395
, pp. 159-168
-
-
Taylor, J.E.1
Hatcher, P.E.2
Paul, N.D.3
-
4
-
-
41449107306
-
Building pathway clusters from random forests classification using class votes
-
Pang H., Zhao H. Building pathway clusters from random forests classification using class votes. BMC Bioinformatics 2008, 9:87.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 87
-
-
Pang, H.1
Zhao, H.2
-
5
-
-
0034613141
-
Signal transduction. Are there close encounters between signaling pathways?
-
Noselli S., Perrimon N. Signal transduction. Are there close encounters between signaling pathways?. Science 2000, 290(5489):68-69.
-
(2000)
Science
, vol.290
, Issue.5489
, pp. 68-69
-
-
Noselli, S.1
Perrimon, N.2
-
6
-
-
1842559888
-
Optimization models for cancer classification: extracting gene interaction information from microarray expression data
-
Antonov A.V., et al. Optimization models for cancer classification: extracting gene interaction information from microarray expression data. Bioinformatics 2004, 20(5):644-652.
-
(2004)
Bioinformatics
, vol.20
, Issue.5
, pp. 644-652
-
-
Antonov, A.V.1
-
7
-
-
15844413351
-
A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis
-
Statnikov A., et al. A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis. Bioinformatics 2005, 21(5):631-643.
-
(2005)
Bioinformatics
, vol.21
, Issue.5
, pp. 631-643
-
-
Statnikov, A.1
-
8
-
-
13744261323
-
Multi-class cancer classification by total principal component regression (TPCR) using microarray gene expression data
-
Tan Y., et al. Multi-class cancer classification by total principal component regression (TPCR) using microarray gene expression data. Nucleic Acids Res 2005, 33(1):56-65.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.1
, pp. 56-65
-
-
Tan, Y.1
-
9
-
-
31144459985
-
Oncogenic pathway signatures in human cancers as a guide to targeted therapies
-
Bild A.H., et al. Oncogenic pathway signatures in human cancers as a guide to targeted therapies. Nature 2006, 439(7074):353-357.
-
(2006)
Nature
, vol.439
, Issue.7074
, pp. 353-357
-
-
Bild, A.H.1
-
10
-
-
33747841010
-
Pathway analysis using random forests classification and regression
-
Pang H., et al. Pathway analysis using random forests classification and regression. Bioinformatics 2006, 22(16):2028-2036.
-
(2006)
Bioinformatics
, vol.22
, Issue.16
, pp. 2028-2036
-
-
Pang, H.1
-
12
-
-
77956264734
-
-
<>
-
Biocarta. <>http://www.biocarta.com/.
-
Biocarta
-
-
-
13
-
-
84870422128
-
Kyoto Encyclopedia of Genes and Genomes
-
<>
-
Kyoto Encyclopedia of Genes and Genomes. <>http://www.genome.jp/kegg/.
-
-
-
-
14
-
-
22744448864
-
Identification of molecular apocrine breast tumours by microarray analysis
-
Farmer P., et al. Identification of molecular apocrine breast tumours by microarray analysis. Oncogene 2005, 24(29):4660-4671.
-
(2005)
Oncogene
, vol.24
, Issue.29
, pp. 4660-4671
-
-
Farmer, P.1
-
15
-
-
0036258111
-
The IARC TP53 database: new online mutation analysis and recommendations to users
-
Olivier M., et al. The IARC TP53 database: new online mutation analysis and recommendations to users. Hum Mutat 2002, 19(6):607-614.
-
(2002)
Hum Mutat
, vol.19
, Issue.6
, pp. 607-614
-
-
Olivier, M.1
-
16
-
-
47549097907
-
Gene expression profiling distinguishes JAK2V617F-negative from JAK2V617F-positive patients in essential thrombocythemia
-
Puigdecanet E., et al. Gene expression profiling distinguishes JAK2V617F-negative from JAK2V617F-positive patients in essential thrombocythemia. Leukemia 2008, 22(7):1368-1376.
-
(2008)
Leukemia
, vol.22
, Issue.7
, pp. 1368-1376
-
-
Puigdecanet, E.1
-
17
-
-
18544365698
-
Gene-expression profiles predict survival of patients with lung adenocarcinoma
-
Beer D.G., et al. Gene-expression profiles predict survival of patients with lung adenocarcinoma. Nat Med 2002, 8(8):816-824.
-
(2002)
Nat Med
, vol.8
, Issue.8
, pp. 816-824
-
-
Beer, D.G.1
-
18
-
-
77956264769
-
-
Recursive sample classification and gene selection based on SVM: method and software description. Technical report. Department of Biostatistics, Harvard School of Public Health
-
Zhang XWW. Recursive sample classification and gene selection based on SVM: method and software description. Technical report. Department of Biostatistics, Harvard School of Public Health; 2001.
-
(2001)
-
-
Zhang, X.W.W.1
-
19
-
-
0036161259
-
Gene selection for cancer classification using support vector machines
-
Guyon I., et al. Gene selection for cancer classification using support vector machines. Machine Learning 2002, (46):389-422.
-
(2002)
Machine Learning
, Issue.46
, pp. 389-422
-
-
Guyon, I.1
-
20
-
-
0141738784
-
Comparison of statistical methods for classification of ovarian cancer using mass spectrometry data
-
Wu B., et al. Comparison of statistical methods for classification of ovarian cancer using mass spectrometry data. Bioinformatics 2003, 19(13):1636-1643.
-
(2003)
Bioinformatics
, vol.19
, Issue.13
, pp. 1636-1643
-
-
Wu, B.1
-
21
-
-
0345548657
-
Random forest: a classification and regression tool for compound classification and QSAR modeling
-
Svetnik V., et al. Random forest: a classification and regression tool for compound classification and QSAR modeling. J Chem Inf Comput Sci 2003, 43(6):1947-1958.
-
(2003)
J Chem Inf Comput Sci
, vol.43
, Issue.6
, pp. 1947-1958
-
-
Svetnik, V.1
-
22
-
-
33646018046
-
Evaluation of different biological data and computational classification methods for use in protein interaction prediction
-
Qi Y., Bar-Joseph Z., Klein-Seetharaman J. Evaluation of different biological data and computational classification methods for use in protein interaction prediction. Proteins 2006, 63(3):490-500.
-
(2006)
Proteins
, vol.63
, Issue.3
, pp. 490-500
-
-
Qi, Y.1
Bar-Joseph, Z.2
Klein-Seetharaman, J.3
-
23
-
-
0027621699
-
-
Mining association rules between sets of items in large databases. In: Proceedings of the 1993 ACM SIGMOD international conference on management of data
-
Agrawal R, Imielinski T, Swami AN. Mining association rules between sets of items in large databases. In: Proceedings of the 1993 ACM SIGMOD international conference on management of data; 1993. p. 207-16.
-
(1993)
, pp. 207-16
-
-
Agrawal, R.1
Imielinski, T.2
Swami, A.N.3
-
24
-
-
77956263042
-
-
Efficiently using prefix-trees in mining frequent itemsets. In: Proceedings of the ICDM workshop on frequent itemset mining implementations
-
Grahne G, Zhu J. Efficiently using prefix-trees in mining frequent itemsets. In: Proceedings of the ICDM workshop on frequent itemset mining implementations; 2003.
-
(2003)
-
-
Grahne, G.1
Zhu, J.2
-
25
-
-
33751202983
-
GATA-3 maintains the differentiation of the luminal cell fate in the mammary gland
-
Kouros-Mehr H., et al. GATA-3 maintains the differentiation of the luminal cell fate in the mammary gland. Cell 2006, 127(5):1041-1055.
-
(2006)
Cell
, vol.127
, Issue.5
, pp. 1041-1055
-
-
Kouros-Mehr, H.1
-
26
-
-
29244481995
-
Identification of GATA3 as a breast cancer prognostic marker by global gene expression meta-analysis
-
Mehra R., et al. Identification of GATA3 as a breast cancer prognostic marker by global gene expression meta-analysis. Cancer Res 2005, 65(24):11259-11264.
-
(2005)
Cancer Res
, vol.65
, Issue.24
, pp. 11259-11264
-
-
Mehra, R.1
-
27
-
-
33847126689
-
Gata-3 is an essential regulator of mammary-gland morphogenesis and luminal-cell differentiation
-
Asselin-Labat M.L., et al. Gata-3 is an essential regulator of mammary-gland morphogenesis and luminal-cell differentiation. Nat Cell Biol 2007, 9(2):201-209.
-
(2007)
Nat Cell Biol
, vol.9
, Issue.2
, pp. 201-209
-
-
Asselin-Labat, M.L.1
-
28
-
-
38849169710
-
Common genetic variation in GATA-binding protein 3 and differential susceptibility to breast cancer by estrogen receptor alpha tumor status
-
Garcia-Closas M., et al. Common genetic variation in GATA-binding protein 3 and differential susceptibility to breast cancer by estrogen receptor alpha tumor status. Cancer Epidemiol Biomarkers Prev 2007, 16(11):2269-2275.
-
(2007)
Cancer Epidemiol Biomarkers Prev
, vol.16
, Issue.11
, pp. 2269-2275
-
-
Garcia-Closas, M.1
-
29
-
-
62849123845
-
Expression of heregulin, phosphorylated HER-2, HER-3 and HER-4 in HER-2 negative breast cancers
-
Haas S., et al. Expression of heregulin, phosphorylated HER-2, HER-3 and HER-4 in HER-2 negative breast cancers. Oncol Rep 2009, 21(2):299-304.
-
(2009)
Oncol Rep
, vol.21
, Issue.2
, pp. 299-304
-
-
Haas, S.1
-
30
-
-
0037453706
-
MTA3, a Mi-2/NuRD complex subunit, regulates an invasive growth pathway in breast cancer
-
Fujita N., et al. MTA3, a Mi-2/NuRD complex subunit, regulates an invasive growth pathway in breast cancer. Cell 2003, 113(2):207-219.
-
(2003)
Cell
, vol.113
, Issue.2
, pp. 207-219
-
-
Fujita, N.1
-
31
-
-
45949110405
-
Meta-analysis of human cancer microarrays reveals GATA3 is integral to the estrogen receptor alpha pathway
-
Wilson B.J., Giguere V. Meta-analysis of human cancer microarrays reveals GATA3 is integral to the estrogen receptor alpha pathway. Mol Cancer 2008, 7:49.
-
(2008)
Mol Cancer
, vol.7
, pp. 49
-
-
Wilson, B.J.1
Giguere, V.2
-
32
-
-
17844383458
-
A unique clonal JAK2 mutation leading to constitutive signalling causes polycythemia vera
-
James C., et al. A unique clonal JAK2 mutation leading to constitutive signalling causes polycythemia vera. Nature 2005, 434(7037):1144-1148.
-
(2005)
Nature
, vol.434
, Issue.7037
, pp. 1144-1148
-
-
James, C.1
-
33
-
-
1042302898
-
Signaling through JAK2-STAT5 pathway is essential for IL-3-induced activation of microglia
-
Natarajan C., et al. Signaling through JAK2-STAT5 pathway is essential for IL-3-induced activation of microglia. Glia 2004, 45(2):188-196.
-
(2004)
Glia
, vol.45
, Issue.2
, pp. 188-196
-
-
Natarajan, C.1
-
34
-
-
77951041842
-
Apoptosis induced by JAK2 inhibition is mediated by Bim and enhanced by the BH3 mimetic ABT-737 in JAK2 mutant human erythroid cells
-
Will B., et al. Apoptosis induced by JAK2 inhibition is mediated by Bim and enhanced by the BH3 mimetic ABT-737 in JAK2 mutant human erythroid cells. Blood 2010, 115(14):2901-2909.
-
(2010)
Blood
, vol.115
, Issue.14
, pp. 2901-2909
-
-
Will, B.1
-
35
-
-
27344435774
-
Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles
-
Subramanian A., et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 2005, 102(43):15545-15550.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, Issue.43
, pp. 15545-15550
-
-
Subramanian, A.1
-
36
-
-
0037443030
-
Altered protein kinase C (PKC) isoforms in non-small cell lung cancer cells: PKCdelta promotes cellular survival and chemotherapeutic resistance
-
Clark A.S., et al. Altered protein kinase C (PKC) isoforms in non-small cell lung cancer cells: PKCdelta promotes cellular survival and chemotherapeutic resistance. Cancer Res 2003, 63(4):780-786.
-
(2003)
Cancer Res
, vol.63
, Issue.4
, pp. 780-786
-
-
Clark, A.S.1
-
37
-
-
0346094368
-
Cooperation between PKC-alpha and PKC-epsilon in the regulation of JNK activation in human lung cancer cells
-
Lang W., et al. Cooperation between PKC-alpha and PKC-epsilon in the regulation of JNK activation in human lung cancer cells. Cell Signal 2004, 16(4):457-467.
-
(2004)
Cell Signal
, vol.16
, Issue.4
, pp. 457-467
-
-
Lang, W.1
-
38
-
-
34250222039
-
Expression of specific protein kinase C (PKC) isoforms and ligand-specific activation of PKCalpha in late gestation fetal lung
-
Villanueva-Garcia D., et al. Expression of specific protein kinase C (PKC) isoforms and ligand-specific activation of PKCalpha in late gestation fetal lung. Exp Lung Res 2007, 33(3-4):185-196.
-
(2007)
Exp Lung Res
, vol.33
, Issue.3-4
, pp. 185-196
-
-
Villanueva-Garcia, D.1
-
39
-
-
20044371835
-
Circulating angiogenic cytokines in patients with advanced non-small cell lung cancer: correlation with treatment response and survival
-
Dudek A.Z., Mahaseth H. Circulating angiogenic cytokines in patients with advanced non-small cell lung cancer: correlation with treatment response and survival. Cancer Invest 2005, 23(3):193-200.
-
(2005)
Cancer Invest
, vol.23
, Issue.3
, pp. 193-200
-
-
Dudek, A.Z.1
Mahaseth, H.2
-
40
-
-
30344464091
-
Gene expression changes during the development of acute lung injury: role of transforming growth factor beta
-
Wesselkamper S.C., et al. Gene expression changes during the development of acute lung injury: role of transforming growth factor beta. Am J Respir Crit Care Med 2005, 172(11):1399-1411.
-
(2005)
Am J Respir Crit Care Med
, vol.172
, Issue.11
, pp. 1399-1411
-
-
Wesselkamper, S.C.1
-
41
-
-
34447130861
-
Positive cross-regulatory loop ties GATA-3 to estrogen receptor alpha expression in breast cancer
-
Eeckhoute J., et al. Positive cross-regulatory loop ties GATA-3 to estrogen receptor alpha expression in breast cancer. Cancer Res 2007, 67(13):6477-6483.
-
(2007)
Cancer Res
, vol.67
, Issue.13
, pp. 6477-6483
-
-
Eeckhoute, J.1
-
42
-
-
45649084820
-
Correlation between FDG uptake and glucose transporter type 1 expression in neuroendocrine tumors of the lung
-
Song Y.S., et al. Correlation between FDG uptake and glucose transporter type 1 expression in neuroendocrine tumors of the lung. Lung Cancer 2008, 61(1):54-60.
-
(2008)
Lung Cancer
, vol.61
, Issue.1
, pp. 54-60
-
-
Song, Y.S.1
|