Bifidobacterium bifidum actively changes the gene expression profile induced by Lactobacillus acidophilus in murine dendritic cells

PLoS ONE

Volumn 5, Issue 6, 2010, Pages

  Weiss, Gudrun ^a   Rasmussen, Simon ^b   Fink, Lisbeth Nielsen ^b   Jarmer, Hanne ^b   Nielsen, Birgit Nøhr ^a   Frøkiær, Hanne ^a  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

BETA ACTIN; BETA INTERFERON; INTERLEUKIN 10; INTERLEUKIN 12P40; INTERLEUKIN 12P70; INTERLEUKIN 1BETA; INTERLEUKIN 6; JUN DIMERIZATION PROTEIN 2; RNA; STRESS ACTIVATED PROTEIN KINASE; TRANSCRIPTION FACTOR; TUMOR NECROSIS FACTOR ALPHA; UNCLASSIFIED DRUG; PRIMER DNA;

ADAPTIVE IMMUNITY; ANIMAL CELL; ARTICLE; BACTERIAL STRAIN; BIFIDOBACTERIUM BIFIDUM; CELL STIMULATION; CONTROLLED STUDY; CYTOKINE PRODUCTION; DENDRITIC CELL; ENZYME ACTIVATION; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENOME ANALYSIS; IMMUNOREGULATION; INNATE IMMUNITY; LACTOBACILLUS ACIDOPHILUS; MICROARRAY ANALYSIS; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PROTEIN EXPRESSION; REAL TIME POLYMERASE CHAIN REACTION; SIGNAL TRANSDUCTION; TH1 CELL; TH2 CELL; ANIMAL; BIFIDOBACTERIUM; C57BL MOUSE; ENZYME LINKED IMMUNOSORBENT ASSAY; METABOLISM; PHYSIOLOGY; POLYMERASE CHAIN REACTION;

BIFIDOBACTERIUM BIFIDUM; LACTOBACILLUS ACIDOPHILUS; LACTOBACILLUS ACIDOPHILUS NCFM; MURINAE;

ANIMALS; BASE SEQUENCE; BIFIDOBACTERIUM; DENDRITIC CELLS; DNA PRIMERS; ENZYME-LINKED IMMUNOSORBENT ASSAY; GENE EXPRESSION PROFILING; LACTOBACILLUS ACIDOPHILUS; MICE; MICE, INBRED C57BL; POLYMERASE CHAIN REACTION;

EID: 77956223292     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0011065     Document Type: Article

References (42)

1. Akira S, Takeda K (2004) Toll-like receptor signalling. Nature Reviews Immunology 4: 499-511. DOI 10.1038/nri1391.
2. Banchereau J, Steinman RM (1998) Dendritic cells and the control of immunity. Nature 392: 245-252.
3. Steinman RM, Nussenzweig MC (2002) Avoiding horror autotoxicus: The importance of dendritic cells in peripheral T cell tolerance. Proceedings of the National Academy of Sciences of the United States of America 99: 351-358.
4. Fink LN, Zeuthen LH, Christensen HR, Morandi B, Frokiaer H, et al. (2007) Distinct gut-derived lactic acid bacteria elicit divergent dendritic cell-mediated NK cell responses. International Immunology 19: 1319-1327.
5. Zeuthen LH, Christensen HR, Frokiaer H (2006) Lactic acid bacteria inducing a weak interleukin-12 and tumor necrosis factor alpha response in human dendritic cells inhibit strongly stimulating lactic acid bacteria but act synergistically with gram-negative bacteria. Clinical and Vaccine Immunology 13: 365-375.
6. Diehl S, Rincon M (2002) The two faces of IL-6 on Th1/Th2 differentiation. Molecular Immunology 39: 531-536. PII S0161-5890(02)00210-9.
7. Schmitz J, Owyang A, Oldham E, Song Y, Murphy E, et al. (2005) IL-33, an interleukin-1-like cytokine that signals via the IL-1 receptor-related protein ST2 and induces T helper type 2-associated cytokines. Immunity 23: 479-490. S1074-7613(05)00311-0 [pii];10.1016/j.immuni.2005.09.015 [doi].
8. Fink LN, Zeuthen LH, Ferlazzo G, Frokiaer H (2007) Human antigenpresenting cells respond differently to gut-derived probiotic bacteria but mediate similar strain-dependent NK and T cell activation. Fems Immunology and Medical Microbiology 51: 535-546.
9. Young SL, Simon MA, Baird MA, Tannock GW, Bibiloni R, et al. (2004) Bifidobacterial species differentially affect expression of cell surface markers and cytokines of dendritic cells harvested. Clinical and Diagnostic Laboratory Immunology 11: 686-690.
10. Levings MK, Sangregorio R, Galbiati F, Squadrone S, Malefyt RD, et al. (2001) IFN-alpha and IL-10 induce the differentiation of human type 1 T regulatory cells. Journal of Immunology 166: 5530-5539.
11. Luster AD (1998) Chemokines - Chemotactic cytokines that mediate inflammation. New England Journal of Medicine 338: 436-445.
12. Katze MG, He YP, Gale M (2002) Viruses and interferon: A fight for supremacy. Nature Reviews Immunology 2: 675-687. DOI 10.1038/nri888.
13. Gautier G, Humbert M, Deauvieau F, Scuiller M, Hiscott J, et al. (2005) A type I interferon autocrine-paracrine loop is involved in Toll-like receptor-induced interleukin-12p70 secretion by dendritic cells. Journal of Experimental Medicine 201: 1435-1446. DOI 10.1081/jem.20011961.
14. Decker T, Muller M, Stockinger S (2005) The Yin and Yang of type I interferon activity in bacterial infection. Nature Reviews Immunology 5: 675-687. DOI 10.1038/nri1684.
15. Bogdan C, Mattner J, Schleicher U (2004) The role of type I interferons in nonviral infections. Immunological Reviews 202: 33-48.
16. Gratz N, Siller M, Schaljo B, Pirzada ZA, Gattermeier I, et al. (2008) Group A streptococcus activates type I interferon production and MyD88-dependent signaling without involvement of TLR2, TLR4, and TLR9. Journal of Biological Chemistry 283: 19879-19887. DOI 10.1074/jbc.M802848200.
17. Charrel-Dennis M, Latz E, Halmen KA, Trieu-Cuot P, Fitzgerald KA, et al. (2008) TLR-Independent Type I Interferon Induction in Response to an Extracellular Bacterial Pathogen via Intracellular Recognition of Its DNA. Cell Host & Microbe 4: 543-554. DOI 10.1016/j.chom.2008.11.002.
18. Mancuso G, Midiri A, Biondo C, Beninati C, Zummo S, et al. (2007) Type I IFN signaling is crucial for host resistance against different species of pathogenic bacteria. Journal of Immunology 178: 3126-3133.
19. Stockinger S, Kastner R, Kernbauer E, Pilz A, Westermayer S, et al. (2009) Characterization of the Interferon-Producing Cell in Mice Infected with Listeria monocytogenes. Plos Pathogens 5: ARTN e1000355;DOI 10.1371/journal.- ppat.1000355.
20. O'Connell RM, Vaidya SA, Perry AK, Saha SK, Dempsey PW, et al. (2005) Immune activation of type IIFNs by Listeria monocytogenes occurs independently of TLR4, TLR2, and receptor interacting protein 2 but involves TNFRassociated NF-kappa B kinase-binding kinase 1. Journal of Immunology 174: 1602-1607.
21. Falvo JV, Parekh BS, Lin CH, Fraenkel E, Maniatis T (2000) Assembly of a functional beta interferon enhanceosome is dependent on ATF-2-c-jun heterodimer orientation. Mol Cell Biol 20: 4814-4825.
22. Davis RJ (2000) Signal transduction by the JNK group of MAP kinases. Cell 103: 239-252. S0092-8674(00)00116-1 [pii].
23. Christensen HR, Frokiaer H, Pestka JJ (2002) Lactobacilli differentially modulate expression of cytokines and maturation surface markers in murine dendritic cells. Journal of Immunology 168: 171-178.
24. Zeuthen LH, Fink LN, Frokiaer H (2008) Toll-like receptor 2 and nucleotidebinding oligomerization domain-2 play divergent roles in the recognition of gutderived lactobacilli and bifidobacteria in dendritic cells. Immunology 124: 489-502. IMM2800 [pii];10.1111/j.1365-2567.2007.02800.x [doi].
25. Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, et al. (2004) Bioconductor: open software development for computational biology and bioinformatics. Genome Biology 5: ARTN R80.
26. Irizarry RA, Bolstad BM, Collin F, Cope LM, Hobbs B, et al. (2003) Summaries of affymetrix GeneChip probe level data. Nucleic Acids Research 31: ARTN e15;DOI 10.1093/nar/gng015.
27. Workman C, Jensen L, Jarmer H, Berka R, Gautier L, et al. (2002) A new nonlinear normalization method for reducing variability in DNA microarray experiments. Genome Biology 3: research0048. 10.1186/gb-2002-3-9- research0048.
28. Kim SY, Volsky D (2005) PAGE: Parametric Analysis of Gene Set Enrichment. BMC Bioinformatics 6: 144. 10.1186/1471-2105-6-144.
29. Pfaffl MW (2001) A new mathematical model for relative quantification in realtime RT-PCR. Nucleic Acids Research 29: ARTN e45.
30. Panopoulos AD, Watowich SS (2008) Granulocyte colony-stimulating factor: Molecular mechanisms of action during steady state and 'emergency' hematopoiesis. Cytokine 42: 277-288. DOI 10.1016/j.cyto.2008.03.002.
31. Bogoyevitch MA, Kobe B (2006) Uses for JNK: the many and varied substrates of the c-Jun N-terminal kinases. Microbiol Mol Biol Rev 70: 161-1095.70/4/ 1061 [pii];10.1128/MMBR.00025-06 [doi].
32. Sallusto F, Mackay CR, Lanzavecchia A (2000) The role of chemokine receptors in primary, effector, and memory immune responses. Annual Review of Immunology 18: 593.
33. Dinarello CA (1999) IL-18: A TH1 -inducing, proinflammatory cytokine and new member of the IL-1 family. Journal of Allergy and Clinical Immunology 103: 11-24. doi: 10.1016/S0091-6749(99)70518-X.
34. Trinchieri G (2003) Interleukin-12 and the regulation of innate resistance and adaptive immunity. Nature Reviews Immunology 3: 133-146. DOI 10.1038/ nri1001.
35. Romagnani, S (2002) Cytokines and chemoattractants in allergic inflammation. Molecular Immunology 38: 881-885. PII S0161-5890(02)00013-5.
36. van Boxel-Dezaire AHH, Rani MRS, Stark GR (2006) Complex modulation of cell type-specific signaling in response to type I Interferons. Immunity 25: 361-372. DOI 10.1016/j.immuni.2006.08.014.
37. Stark GR, Kerr IM, Williams BRG, Silverman RH, Schreiber RD (1998) How cells respond to interferons. Annual Review of Biochemistry 67: 227-264.
38. Taniguchi T, Takaoka A (2002) The interferon-alpha/beta system in antiviral responses: a multimodal machinery of gene regulation by the IRF family of transcription factors. Current Opinion in Immunology 14: 111-116.
39. Thanos D, Maniatis T (1995) Virus induction of human IFN beta gene expression requires the assembly of an enhanceosome. Cell 83: 1091-1100.
40. Sakaguchi S, Negishi H, Asagiri M, Nakajima C, Mizutani T, et al. (2003) Essential role of IRF-3 in lipopolysaccharide-induced interferon-beta gene expression and endotoxin shock. Biochemical and Biophysical Research Communications 306: 860-866. DOI 10.1016/S0006-291X(03)01049-0.
41. Jin CY, Ugai H, Song J, Murata T, Nili F, et al. (2001) Identification of mouse Jun dimerization protein 2 as a novel repressor of ATF-2. Febs Letters 489: 34-41.
42. Wardell SE, Boonyaratanakornkit V, Adelman JS, Aronheim A, Edwards DP (2002) Jun dimerization protein 2 functions as a progesterone receptor Nterminal domain coactivator. Molecular and Cellular Biology 22: 5451-5466. DOI 10.1128/MCB.22.15.5451-5466.2002.