-
1
-
-
77950788346
-
Parameter estimation of ODE's via nonparametric estimators
-
Brunel N.J.-B. Parameter estimation of ODE's via nonparametric estimators. Electr. J. Stat. 2008, 2:1242-1267.
-
(2008)
Electr. J. Stat.
, vol.2
, pp. 1242-1267
-
-
Brunel, N.J.-B.1
-
2
-
-
0025760713
-
Biochemical Systems Theory: increasing predictive power by using second-order derivative measurements
-
Cascante M., Sorribas A., Franco R., Canela E.I. Biochemical Systems Theory: increasing predictive power by using second-order derivative measurements. J. Theor. Biol. 1991, 149:521-535.
-
(1991)
J. Theor. Biol.
, vol.149
, pp. 521-535
-
-
Cascante, M.1
Sorribas, A.2
Franco, R.3
Canela, E.I.4
-
3
-
-
65649102679
-
Recent developments in parameter estimation and structure identification of biochemical and genomic systems
-
Chou I.-C., Voit E.O. Recent developments in parameter estimation and structure identification of biochemical and genomic systems. Math. Biosci. 2009, 219:57-83.
-
(2009)
Math. Biosci.
, vol.219
, pp. 57-83
-
-
Chou, I.-C.1
Voit, E.O.2
-
6
-
-
14844343897
-
Conditions of optimal classification for piecewise affine regression
-
Springer-Verlag, Berlin, Heidelberg, Prague, Czech Rep.
-
Ferrari-Trecate G., Schinkel M. Conditions of optimal classification for piecewise affine regression. Proc. 6th Int. Workshop on Hybrid Systems: Computation and Control 2003, 188-202. Springer-Verlag, Berlin, Heidelberg, Prague, Czech Rep.
-
(2003)
Proc. 6th Int. Workshop on Hybrid Systems: Computation and Control
, pp. 188-202
-
-
Ferrari-Trecate, G.1
Schinkel, M.2
-
7
-
-
34548786912
-
A learning algorithm for piecewise linear regression
-
Springer, London, Vietri sul Mare, Italy, M. Marinaro, R. Tagliaferri (Eds.)
-
Ferrari-Trecate G., Muselli M., Liberati D., Morari M. A learning algorithm for piecewise linear regression. Neural Nets: WIRN VIETRI-01, 12th Italian Workshop on Neural Nets 2001, 114-119. Springer, London, Vietri sul Mare, Italy. M. Marinaro, R. Tagliaferri (Eds.).
-
(2001)
Neural Nets: WIRN VIETRI-01, 12th Italian Workshop on Neural Nets
, pp. 114-119
-
-
Ferrari-Trecate, G.1
Muselli, M.2
Liberati, D.3
Morari, M.4
-
8
-
-
0034848825
-
Identification of piecewise affine and hybrid systems
-
Ferrari-Trecate G., Muselli M., Liberati D., Morari M. Identification of piecewise affine and hybrid systems. Proceedings of the 2001 American Control Conference, IEEE 2001, 3521-3526.
-
(2001)
Proceedings of the 2001 American Control Conference, IEEE
, pp. 3521-3526
-
-
Ferrari-Trecate, G.1
Muselli, M.2
Liberati, D.3
Morari, M.4
-
9
-
-
0037293274
-
A clustering technique for the identification of piecewise affine and hybrid systems
-
Ferrari-Trecate G., Muselli M., Liberati D., Morari M. A clustering technique for the identification of piecewise affine and hybrid systems. Automatica 2003, 39:205-217.
-
(2003)
Automatica
, vol.39
, pp. 205-217
-
-
Ferrari-Trecate, G.1
Muselli, M.2
Liberati, D.3
Morari, M.4
-
10
-
-
0003608428
-
-
Nauka, Moscow, (English transl., Kluwer, Dordrecht, 1998)
-
Filippov A.F. Differential Equations with Discontinuous Right-hand Sides 1985, Nauka, Moscow, (English transl., Kluwer, Dordrecht, 1998).
-
(1985)
Differential Equations with Discontinuous Right-hand Sides
-
-
Filippov, A.F.1
-
11
-
-
77956012245
-
-
Some Competitive Learning Methods, Technical Report, Institute for Neural Computation, Ruhr-Universität Bochum.
-
Fritzke, B., 1997. Some Competitive Learning Methods, Technical Report, Institute for Neural Computation, Ruhr-Universität Bochum.
-
(1997)
-
-
Fritzke, B.1
-
13
-
-
54949136572
-
System estimation from metabolic time series data
-
Goel G., Chou I.-C., Voit E.O. System estimation from metabolic time series data. Bioinformatics 2008, 24:2505-2511.
-
(2008)
Bioinformatics
, vol.24
, pp. 2505-2511
-
-
Goel, G.1
Chou, I.-C.2
Voit, E.O.3
-
14
-
-
74049099516
-
Identifying quantitative operation principles in metabolic pathways: a systematic method for searching feasible enzyme activity patterns leading to cellular adaptive responses
-
Guillen-Gosalbez G., Sorribas A. Identifying quantitative operation principles in metabolic pathways: a systematic method for searching feasible enzyme activity patterns leading to cellular adaptive responses. BMC Bioinform. 2009, 10:386.
-
(2009)
BMC Bioinform.
, vol.10
, pp. 386
-
-
Guillen-Gosalbez, G.1
Sorribas, A.2
-
15
-
-
36248970060
-
Extracting falsifiable predictions from sloppy models
-
Gutenkunst R.N., Casey F.P., Waterfall J.J., Myers C.R., Sethna J.P. Extracting falsifiable predictions from sloppy models. Ann. N. Y. Acad. Sci. 2007, 1115:203-211.
-
(2007)
Ann. N. Y. Acad. Sci.
, vol.1115
, pp. 203-211
-
-
Gutenkunst, R.N.1
Casey, F.P.2
Waterfall, J.J.3
Myers, C.R.4
Sethna, J.P.5
-
16
-
-
35748977901
-
Universally sloppy parameter sensitivities in systems biology models
-
Gutenkunst R.N., Waterfall J.J., Casey F.P., Brown K.S., Myers C.R., Sethna J.P. Universally sloppy parameter sensitivities in systems biology models. PLoS Comput. Biol. 2007, 3:1871-1878.
-
(2007)
PLoS Comput. Biol.
, vol.3
, pp. 1871-1878
-
-
Gutenkunst, R.N.1
Waterfall, J.J.2
Casey, F.P.3
Brown, K.S.4
Myers, C.R.5
Sethna, J.P.6
-
17
-
-
25144492110
-
Approximative kinetic formats used in metabolic network modeling
-
Heijnen J.J. Approximative kinetic formats used in metabolic network modeling. Biotechnol. Bioeng. 2005, 91:534-545.
-
(2005)
Biotechnol. Bioeng.
, vol.91
, pp. 534-545
-
-
Heijnen, J.J.1
-
18
-
-
70349404010
-
-
Springer, Berlin/Heidelberg
-
Kvasnica M., Greider P., Baotić M., Morari M. Multi-Parametric Toolbox (MPT), Hybrid Systems: Computation and Control 2004, Springer, Berlin/Heidelberg.
-
(2004)
Multi-Parametric Toolbox (MPT), Hybrid Systems: Computation and Control
-
-
Kvasnica, M.1
Greider, P.2
Baotić, M.3
Morari, M.4
-
20
-
-
51749105256
-
Kinetic model of phosphofructokinase-1 from Escherichia coli
-
Peskov K., Goryanin I., Demin O. Kinetic model of phosphofructokinase-1 from Escherichia coli. J. Bioinform. Comput. Biol. 2008, 6:843-867.
-
(2008)
J. Bioinform. Comput. Biol.
, vol.6
, pp. 843-867
-
-
Peskov, K.1
Goryanin, I.2
Demin, O.3
-
21
-
-
13244279645
-
Analysis and generic properties of gene regulatory networks with graded response functions
-
Plahte E., Kjoglum S. Analysis and generic properties of gene regulatory networks with graded response functions. Physica D 2005, 201:150-176.
-
(2005)
Physica D
, vol.201
, pp. 150-176
-
-
Plahte, E.1
Kjoglum, S.2
-
22
-
-
33646364037
-
Identification of metabolic system parameters using global optimization methods
-
Polisetty P.K., Voit E.O., Gatzke E.P. Identification of metabolic system parameters using global optimization methods. Theor. Biol. Med. Model. 2006, 3:4.
-
(2006)
Theor. Biol. Med. Model.
, vol.3
, pp. 4
-
-
Polisetty, P.K.1
Voit, E.O.2
Gatzke, E.P.3
-
23
-
-
67650760503
-
Structural and practical identifiability analysis of partially observed dynamical models by exploiting the profile likelihood
-
Raue A., Kreutz C., Maiwald T., Bachmann J., Schilling M., Klingmuller U., Timmer J. Structural and practical identifiability analysis of partially observed dynamical models by exploiting the profile likelihood. Bioinformatics 2009, 25:1923-1929.
-
(2009)
Bioinformatics
, vol.25
, pp. 1923-1929
-
-
Raue, A.1
Kreutz, C.2
Maiwald, T.3
Bachmann, J.4
Schilling, M.5
Klingmuller, U.6
Timmer, J.7
-
24
-
-
0014649230
-
Biochemical systems analysis. I. Some mathematical properties of the rate law for the component enzymatic reactions
-
Savageau M.A. Biochemical systems analysis. I. Some mathematical properties of the rate law for the component enzymatic reactions. J. Theor. Biol. 1969, 25:365-369.
-
(1969)
J. Theor. Biol.
, vol.25
, pp. 365-369
-
-
Savageau, M.A.1
-
25
-
-
0014658880
-
Biochemical systems analysis. II. The steady-state solutions for an n-pool system using a power-law approximation
-
Savageau M.A. Biochemical systems analysis. II. The steady-state solutions for an n-pool system using a power-law approximation. J. Theor. Biol. 1969, 25:370-379.
-
(1969)
J. Theor. Biol.
, vol.25
, pp. 370-379
-
-
Savageau, M.A.1
-
26
-
-
0014733809
-
Biochemical systems analysis. 3. Dynamic solutions using a power-law approximation
-
Savageau M.A. Biochemical systems analysis. 3. Dynamic solutions using a power-law approximation. J. Theor. Biol. 1970, 26:215-226.
-
(1970)
J. Theor. Biol.
, vol.26
, pp. 215-226
-
-
Savageau, M.A.1
-
28
-
-
0035578429
-
Design principles for elementary gene circuits: elements, methods, and examples
-
Savageau M.A. Design principles for elementary gene circuits: elements, methods, and examples. Chaos 2001, 11:142.
-
(2001)
Chaos
, vol.11
, pp. 142
-
-
Savageau, M.A.1
-
29
-
-
0036846553
-
Alternative designs for a genetic switch: analysis of switching times using the piecewise power-law representation
-
Savageau M.A. Alternative designs for a genetic switch: analysis of switching times using the piecewise power-law representation. Math. Biosci. 2002, 180:237-253.
-
(2002)
Math. Biosci.
, vol.180
, pp. 237-253
-
-
Savageau, M.A.1
-
30
-
-
0342349799
-
Recasting nonlinear differential equations as S-systems: a canonical nonlinear form
-
Savageau M.A., Voit E.O. Recasting nonlinear differential equations as S-systems: a canonical nonlinear form. Math. Biosci. 1987, 87:83-115.
-
(1987)
Math. Biosci.
, vol.87
, pp. 83-115
-
-
Savageau, M.A.1
Voit, E.O.2
-
33
-
-
0002465693
-
A spline least squares method for numerical parameter estimation in differential equations
-
Varah J.M. A spline least squares method for numerical parameter estimation in differential equations. SIAM J. Sci. Stat. Comput. 1982, 3:28-46.
-
(1982)
SIAM J. Sci. Stat. Comput.
, vol.3
, pp. 28-46
-
-
Varah, J.M.1
-
34
-
-
35448979185
-
Automated smoother for the numerical decoupling of dynamics models
-
Vilela M., Borges C.C., Vinga S., Vasconcelos A.T., Santos H., Voit E.O., Almeida J.S. Automated smoother for the numerical decoupling of dynamics models. BMC Bioinform. 2007, 8:305.
-
(2007)
BMC Bioinform.
, vol.8
, pp. 305
-
-
Vilela, M.1
Borges, C.C.2
Vinga, S.3
Vasconcelos, A.T.4
Santos, H.5
Voit, E.O.6
Almeida, J.S.7
-
37
-
-
58149268119
-
Modeling networks using power-laws and S-systems
-
Voit E.O. Modeling networks using power-laws and S-systems. Essays Biochem. 2008, 45:29-40.
-
(2008)
Essays Biochem.
, vol.45
, pp. 29-40
-
-
Voit, E.O.1
-
38
-
-
4444351989
-
Decoupling dynamical systems for pathway identification from metabolic profiles
-
Voit E.O., Almeida J. Decoupling dynamical systems for pathway identification from metabolic profiles. Bioinformatics 2004, 20:1670-1681.
-
(2004)
Bioinformatics
, vol.20
, pp. 1670-1681
-
-
Voit, E.O.1
Almeida, J.2
-
39
-
-
0001622717
-
Power-law approach to modeling biological systems. III. Methods of analysis
-
Voit E.O., Savageau M.A. Power-law approach to modeling biological systems. III. Methods of analysis. J. Ferment. Technol. 1982, 60:233-241.
-
(1982)
J. Ferment. Technol.
, vol.60
, pp. 233-241
-
-
Voit, E.O.1
Savageau, M.A.2
-
40
-
-
72049107766
-
Estimation of metabolic pathway systems from different data sources
-
Voit E.O., Goel G., Chou I.-C., da Fonseca L. Estimation of metabolic pathway systems from different data sources. IET Syst. Biol. 2009, 3(6):513-522.
-
(2009)
IET Syst. Biol.
, vol.3
, Issue.6
, pp. 513-522
-
-
Voit, E.O.1
Goel, G.2
Chou, I.-C.3
da Fonseca, L.4
|